RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 MTX1Q13505 466 aa19.72■□□□□ 0.75
VCX3A-201ENST00000381089 SPATA5Q8NB90 893 aa19.72■□□□□ 0.75
VCX3A-201ENST00000381089 ZNF280CQ8ND82 737 aa19.72■□□□□ 0.75
VCX3A-201ENST00000381089 RAI14Q9P0K7 980 aa19.72■□□□□ 0.75
VCX3A-201ENST00000381089 COL2A1P02458 1487 aaPredicted RBP19.72■□□□□ 0.75
VCX3A-201ENST00000381089 ZBTB7BO15156 539 aaPredicted RBP19.71■□□□□ 0.75
VCX3A-201ENST00000381089 SPP2Q13103 211 aa19.71■□□□□ 0.75
VCX3A-201ENST00000381089 TREML2Q5T2D2 321 aa19.71■□□□□ 0.75
VCX3A-201ENST00000381089 NSUN4Q96CB9 384 aaKnown RBP19.71■□□□□ 0.75
VCX3A-201ENST00000381089 AS3MTQ9HBK9 375 aa19.71■□□□□ 0.75
VCX3A-201ENST00000381089 HMG20BQ9P0W2 317 aa19.71■□□□□ 0.75
VCX3A-201ENST00000381089 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.71■□□□□ 0.75
VCX3A-201ENST00000381089 A0A1W2PPC1 479 aa19.7■□□□□ 0.74
VCX3A-201ENST00000381089 SLURP2P0DP57 97 aa19.7■□□□□ 0.74
VCX3A-201ENST00000381089 CCDC84Q86UT8 332 aaPredicted RBP19.7■□□□□ 0.74
VCX3A-201ENST00000381089 PAK6Q9NQU5 681 aaPredicted RBP19.7■□□□□ 0.74
VCX3A-201ENST00000381089 LRP2BPQ9P2M1 347 aa19.7■□□□□ 0.74
VCX3A-201ENST00000381089 HERC5Q9UII4 1024 aaKnown RBP19.7■□□□□ 0.74
VCX3A-201ENST00000381089 RANBP2P49792 3224 aaKnown RBP19.7■□□□□ 0.74
VCX3A-201ENST00000381089 FAM196BA6NMK8 535 aa19.69■□□□□ 0.74
VCX3A-201ENST00000381089 USP17L5A8MUK1 530 aa19.69■□□□□ 0.74
VCX3A-201ENST00000381089 IPO8O15397 1037 aaKnown RBP19.69■□□□□ 0.74
VCX3A-201ENST00000381089 UQCRFS1P1P0C7P4 283 aa19.69■□□□□ 0.74
VCX3A-201ENST00000381089 RARSP54136 660 aaKnown RBP19.69■□□□□ 0.74
VCX3A-201ENST00000381089 G3BP1Q13283 466 aaKnown RBP eCLIP19.69■□□□□ 0.74
VCX3A-201ENST00000381089 TEX11Q8IYF3 940 aa19.69■□□□□ 0.74
VCX3A-201ENST00000381089 BAG3O95817 575 aa19.68■□□□□ 0.74
VCX3A-201ENST00000381089 HMGCRP04035 888 aa19.68■□□□□ 0.74
VCX3A-201ENST00000381089 GNAI2P04899 355 aa19.68■□□□□ 0.74
VCX3A-201ENST00000381089 ARID4AP29374 1257 aaPredicted RBP19.68■□□□□ 0.74
VCX3A-201ENST00000381089 CAP2P40123 477 aa19.68■□□□□ 0.74
VCX3A-201ENST00000381089 HMGCS2P54868 508 aa19.68■□□□□ 0.74
VCX3A-201ENST00000381089 NECAB2Q7Z6G3 386 aa19.68■□□□□ 0.74
VCX3A-201ENST00000381089 CRISPLD2Q9H0B8 497 aa19.68■□□□□ 0.74
VCX3A-201ENST00000381089 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.68■□□□□ 0.74
VCX3A-201ENST00000381089 DHX36Q9H2U1 1008 aaKnown RBP19.68■□□□□ 0.74
VCX3A-201ENST00000381089 SZT2Q5T011 3432 aa19.68■□□□□ 0.74
VCX3A-201ENST00000381089 PLCG2P16885 1265 aa19.67■□□□□ 0.74
VCX3A-201ENST00000381089 DIEXFQ68CQ4 756 aaKnown RBP19.67■□□□□ 0.74
VCX3A-201ENST00000381089 TBC1D9Q6ZT07 1266 aa19.67■□□□□ 0.74
VCX3A-201ENST00000381089 ANKLE1Q8NAG6 615 aa19.67■□□□□ 0.74
VCX3A-201ENST00000381089 ZNF384Q8TF68 577 aa19.67■□□□□ 0.74
VCX3A-201ENST00000381089 TRIM34Q9BYJ4 488 aa19.67■□□□□ 0.74
VCX3A-201ENST00000381089 PRO3102Q9H379 93 aa19.67■□□□□ 0.74
VCX3A-201ENST00000381089 PI4KBQ9UBF8 816 aa19.67■□□□□ 0.74
VCX3A-201ENST00000381089 LOC285556D6RIA3 1793 aa19.67■□□□□ 0.74
VCX3A-201ENST00000381089 IRX3P78415 501 aaPredicted RBP19.66■□□□□ 0.74
VCX3A-201ENST00000381089 SH3D19Q5HYK7 790 aa19.66■□□□□ 0.74
VCX3A-201ENST00000381089 PI16Q6UXB8 463 aa19.66■□□□□ 0.74
VCX3A-201ENST00000381089 PAWRQ96IZ0 340 aaKnown RBP19.66■□□□□ 0.74
VCX3A-201ENST00000381089 ASCC2Q9H1I8 757 aaPredicted RBP19.66■□□□□ 0.74
VCX3A-201ENST00000381089 TMOD4Q9NZQ9 345 aa19.66■□□□□ 0.74
VCX3A-201ENST00000381089 ATAD5Q96QE3 1844 aa19.66■□□□□ 0.74
VCX3A-201ENST00000381089 DOCK3Q8IZD9 2030 aa19.66■□□□□ 0.74
VCX3A-201ENST00000381089 ASNSP08243 561 aa19.65■□□□□ 0.74
VCX3A-201ENST00000381089 NAA16Q6N069 864 aaPredicted RBP19.65■□□□□ 0.74
VCX3A-201ENST00000381089 HMX1Q9NP08 348 aaPredicted RBP19.65■□□□□ 0.74
VCX3A-201ENST00000381089 RPTORQ8N122 1335 aa19.65■□□□□ 0.74
VCX3A-201ENST00000381089 MCAMP43121 646 aa19.64■□□□□ 0.73
VCX3A-201ENST00000381089 SH3RF3Q8TEJ3 882 aaPredicted RBP19.64■□□□□ 0.73
VCX3A-201ENST00000381089 IGSF3O75054 1194 aa19.63■□□□□ 0.73
VCX3A-201ENST00000381089 MTMR2Q13614 643 aa19.63■□□□□ 0.73
VCX3A-201ENST00000381089 CCDC158Q5M9N0 1113 aa19.63■□□□□ 0.73
VCX3A-201ENST00000381089 TTC39AQ5SRH9 613 aa19.63■□□□□ 0.73
VCX3A-201ENST00000381089 CRACR2BQ8N4Y2 399 aaPredicted RBP19.63■□□□□ 0.73
VCX3A-201ENST00000381089 WDR18Q9BV38 432 aa19.63■□□□□ 0.73
VCX3A-201ENST00000381089 GINM1Q9NU53 330 aa19.63■□□□□ 0.73
VCX3A-201ENST00000381089 AATFQ9NY61 560 aaKnown RBP eCLIP19.63■□□□□ 0.73
VCX3A-201ENST00000381089 MORF4L1Q9UBU8 362 aa19.63■□□□□ 0.73
VCX3A-201ENST00000381089 C19orf81C9J6K1 198 aa19.62■□□□□ 0.73
VCX3A-201ENST00000381089 BACE1P56817 501 aa19.62■□□□□ 0.73
VCX3A-201ENST00000381089 ATF7IPQ6VMQ6 1270 aa19.62■□□□□ 0.73
VCX3A-201ENST00000381089 CCAR1Q8IX12 1150 aaKnown RBP19.62■□□□□ 0.73
VCX3A-201ENST00000381089 SOCS4Q8WXH5 440 aa19.62■□□□□ 0.73
VCX3A-201ENST00000381089 NBPF3Q9H094 633 aa19.62■□□□□ 0.73
VCX3A-201ENST00000381089 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.62■□□□□ 0.73
VCX3A-201ENST00000381089 TRIM27P14373 513 aa19.61■□□□□ 0.73
VCX3A-201ENST00000381089 OS9Q13438 667 aaPredicted RBP19.61■□□□□ 0.73
VCX3A-201ENST00000381089 PDE3AQ14432 1141 aa19.61■□□□□ 0.73
VCX3A-201ENST00000381089 FOXP4Q8IVH2 680 aaPredicted RBP19.61■□□□□ 0.73
VCX3A-201ENST00000381089 TRMT44Q8IYL2 757 aaKnown RBP19.61■□□□□ 0.73
VCX3A-201ENST00000381089 GPRC5AQ8NFJ5 357 aa19.61■□□□□ 0.73
VCX3A-201ENST00000381089 GTF3C2Q8WUA4 911 aaPredicted RBP19.61■□□□□ 0.73
VCX3A-201ENST00000381089 FRAT1Q92837 279 aaPredicted RBP19.61■□□□□ 0.73
VCX3A-201ENST00000381089 STAP2Q9UGK3 403 aa19.61■□□□□ 0.73
VCX3A-201ENST00000381089 GJD2Q9UKL4 321 aa19.61■□□□□ 0.73
VCX3A-201ENST00000381089 MAST2Q6P0Q8 1798 aa19.6■□□□□ 0.73
VCX3A-201ENST00000381089 PNMA6EA0A0J9YXQ4 647 aa19.6■□□□□ 0.73
VCX3A-201ENST00000381089 USP17L10C9JJH3 530 aa19.6■□□□□ 0.73
VCX3A-201ENST00000381089 HLA-DOAP06340 250 aa19.6■□□□□ 0.73
VCX3A-201ENST00000381089 HOXA7P31268 230 aaPredicted RBP19.6■□□□□ 0.73
VCX3A-201ENST00000381089 PPP4CP60510 307 aa19.6■□□□□ 0.73
VCX3A-201ENST00000381089 RRP1BQ14684 758 aaKnown RBP19.6■□□□□ 0.73
VCX3A-201ENST00000381089 C7orf61Q8IZ16 206 aa19.6■□□□□ 0.73
VCX3A-201ENST00000381089 DIS3LQ8TF46 1054 aaKnown RBP19.6■□□□□ 0.73
VCX3A-201ENST00000381089 TGFBRAP1Q8WUH2 860 aa19.6■□□□□ 0.73
VCX3A-201ENST00000381089 NUDT12Q9BQG2 462 aa19.6■□□□□ 0.73
VCX3A-201ENST00000381089 GPR108Q9NPR9 543 aa19.6■□□□□ 0.73
VCX3A-201ENST00000381089 FLT1P17948 1338 aa19.59■□□□□ 0.73
VCX3A-201ENST00000381089 CYP2B6P20813 491 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms