RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 IQCA1Q86XH1 822 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 COL23A1Q86Y22 540 aaPredicted RBP13.95□□□□□ -0.18
USP3-202ENST00000380324 SH3RF3Q8TEJ3 882 aaPredicted RBP13.95□□□□□ -0.18
USP3-202ENST00000380324 CD209Q9NNX6 404 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 ATP8A2Q9NTI2 1148 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 POLLQ9UGP5 575 aa13.95□□□□□ -0.18
USP3-202ENST00000380324 LTBP1Q14766 1721 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 BAZ2BQ9UIF8 2168 aaKnown RBP13.94□□□□□ -0.18
USP3-202ENST00000380324 STK36Q9NRP7 1315 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 PPEF1O14829 653 aaPredicted RBP13.94□□□□□ -0.18
USP3-202ENST00000380324 NMT2O60551 498 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 USP17L8P0C7I0 530 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 IFNAR1P17181 557 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 USP5P45974 858 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 SF3A1Q15459 793 aaKnown RBP13.94□□□□□ -0.18
USP3-202ENST00000380324 FAM47AQ5JRC9 791 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 CCDC73Q6ZRK6 1079 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 TRIM22Q8IYM9 498 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 TMTC2Q8N394 836 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 FANCBQ8NB91 859 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 TBC1D16Q8TBP0 767 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 PDLIM2Q96JY6 352 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 RTEL1Q9NZ71 1219 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 USP25Q9UHP3 1055 aa13.94□□□□□ -0.18
USP3-202ENST00000380324 COL11A2P13942 1736 aaPredicted RBP13.94□□□□□ -0.18
USP3-202ENST00000380324 BBOX1O75936 387 aa13.93□□□□□ -0.18
USP3-202ENST00000380324 HOXA10P31260 410 aaPredicted RBP13.93□□□□□ -0.18
USP3-202ENST00000380324 MSL1Q68DK7 614 aa13.93□□□□□ -0.18
USP3-202ENST00000380324 FSIP1Q8NA03 581 aa13.93□□□□□ -0.18
USP3-202ENST00000380324 LINC00301Q8NCQ3 95 aa13.93□□□□□ -0.18
USP3-202ENST00000380324 MTA3Q9BTC8 594 aa13.93□□□□□ -0.18
USP3-202ENST00000380324 CCDC196A0A1B0GTZ2 297 aa13.93□□□□□ -0.18
USP3-202ENST00000380324 TYRO3Q06418 890 aa13.93□□□□□ -0.18
USP3-202ENST00000380324 OLFM4Q6UX06 510 aa13.93□□□□□ -0.18
USP3-202ENST00000380324 POLR3EQ9NVU0 708 aa13.93□□□□□ -0.18
USP3-202ENST00000380324 PCDHA7Q9UN72 937 aa13.93□□□□□ -0.18
USP3-202ENST00000380324 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.93□□□□□ -0.18
USP3-202ENST00000380324 SLC3A2P08195 630 aaKnown RBP13.92□□□□□ -0.18
USP3-202ENST00000380324 PCP11498 1178 aaKnown RBP13.92□□□□□ -0.18
USP3-202ENST00000380324 MFSD14BQ5SR56 506 aa13.92□□□□□ -0.18
USP3-202ENST00000380324 C15orf52Q6ZUT6 534 aaKnown RBP13.92□□□□□ -0.18
USP3-202ENST00000380324 AKT1S1Q96B36 256 aa13.92□□□□□ -0.18
USP3-202ENST00000380324 CRAMP1Q96RY5 1269 aa13.92□□□□□ -0.18
USP3-202ENST00000380324 NOL10Q9BSC4 688 aaKnown RBP13.92□□□□□ -0.18
USP3-202ENST00000380324 NRXN2Q9P2S2 1712 aa13.92□□□□□ -0.18
USP3-202ENST00000380324 ESPNB1AK53 854 aa13.92□□□□□ -0.18
USP3-202ENST00000380324 FGRP09769 529 aa13.92□□□□□ -0.18
USP3-202ENST00000380324 GSTO1P78417 241 aa13.92□□□□□ -0.18
USP3-202ENST00000380324 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
USP3-202ENST00000380324 ANO1Q5XXA6 986 aa13.92□□□□□ -0.18
USP3-202ENST00000380324 CATIPQ7Z7H3 387 aa13.92□□□□□ -0.18
USP3-202ENST00000380324 KCNG4Q8TDN1 519 aa13.92□□□□□ -0.18
USP3-202ENST00000380324 KCNJ14Q9UNX9 436 aa13.92□□□□□ -0.18
USP3-202ENST00000380324 MROH7-TTC4A0A0A0MT08 1334 aa13.92□□□□□ -0.18
USP3-202ENST00000380324 TNS1Q9HBL0 1735 aaKnown RBP13.92□□□□□ -0.18
USP3-202ENST00000380324 TSPY2A6NKD2 308 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 RIMBP2O15034 1052 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 PLSCR1O15162 318 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 SPTLC2O15270 562 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 KINO60870 393 aaKnown RBP13.91□□□□□ -0.18
USP3-202ENST00000380324 BAG3O95817 575 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 MMP10P09238 476 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 PDE4BQ07343 736 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 NBPF11Q86T75 865 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 NLGN1Q8N2Q7 840 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 CRACR2BQ8N4Y2 399 aaPredicted RBP13.91□□□□□ -0.18
USP3-202ENST00000380324 TGFBRAP1Q8WUH2 860 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 WASF1Q92558 559 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 FBXW7Q969H0 707 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 PODXL2Q9NZ53 605 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 MRVI1Q9Y6F6 885 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 A0A1B0GVL5 298 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 hCG_1642624A0A1W2PR95 340 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 KLRG2A4D1S0 409 aaPredicted RBP13.91□□□□□ -0.18
USP3-202ENST00000380324 ORC4O43929 436 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 PLEKHA8P1O95397 391 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 DEXIO95424 95 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 YEATS4O95619 227 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 IL1R1P14778 569 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 MARCKSP29966 332 aaPredicted RBP13.91□□□□□ -0.18
USP3-202ENST00000380324 BTDP43251 543 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 RCAN1P53805 252 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 FAM160A1Q05DH4 1040 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 SNW1Q13573 536 aaKnown RBP13.91□□□□□ -0.18
USP3-202ENST00000380324 TMED8Q6PL24 325 aaPredicted RBP13.91□□□□□ -0.18
USP3-202ENST00000380324 MRPS27Q92552 414 aaKnown RBP13.91□□□□□ -0.18
USP3-202ENST00000380324 DYNLL2Q96FJ2 89 aa13.91□□□□□ -0.18
USP3-202ENST00000380324 RTFDC1Q9BY42 306 aaPredicted RBP13.91□□□□□ -0.18
USP3-202ENST00000380324 SAP30BPQ9UHR5 308 aaKnown RBP13.91□□□□□ -0.18
USP3-202ENST00000380324 ANO6Q4KMQ2 910 aa13.9□□□□□ -0.18
USP3-202ENST00000380324 SBK1Q52WX2 424 aa13.9□□□□□ -0.18
USP3-202ENST00000380324 RBM43Q6ZSC3 357 aaKnown RBP13.9□□□□□ -0.18
USP3-202ENST00000380324 MAPKAPK5Q8IW41 473 aa13.9□□□□□ -0.18
USP3-202ENST00000380324 ZBTB22O15209 634 aa13.9□□□□□ -0.18
USP3-202ENST00000380324 MMP1P03956 469 aa13.9□□□□□ -0.18
USP3-202ENST00000380324 SRGNP10124 158 aa13.9□□□□□ -0.18
USP3-202ENST00000380324 ADALQ6DHV7 355 aa13.9□□□□□ -0.18
USP3-202ENST00000380324 SASS6Q6UVJ0 657 aa13.9□□□□□ -0.18
USP3-202ENST00000380324 DIS3L2Q8IYB7 885 aaKnown RBP13.9□□□□□ -0.18
USP3-202ENST00000380324 MKRN1Q9UHC7 482 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms