RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ANO1Q5XXA6 986 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 SYNE3Q6ZMZ3 975 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 NBPF5PQ86XG9 351 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 TDRD7Q8NHU6 1098 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 ARHGEF1Q92888 912 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 SLC26A6Q9BXS9 759 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 CCNL1Q9UK58 526 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 USP21Q9UK80 565 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 MYH6P13533 1939 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 CDKL5O76039 1030 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 YEATS4O95619 227 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 IQCB1Q15051 598 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 AXDND1Q5T1B0 1012 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 RC3H1Q5TC82 1133 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 FBXO33Q7Z6M2 555 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 TXNRD3Q86VQ6 643 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 FBXW7Q969H0 707 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 NLRP3Q96P20 1036 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 GNL3LQ9NVN8 582 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 R3HCC1Q9Y3T6 440 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 NHSQ6T4R5 1651 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 A0A1W2PQ27 194 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 A0A1W2PQ64 194 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 A0A1W2PQD8 194 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 ZPR1O75312 459 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 TM4SF1P30408 202 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 KIAA2012Q0VF49 1180 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 WTAPQ15007 396 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 KCNG4Q8TDN1 519 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 JAG2Q9Y219 1238 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 MROH7-TTC4A0A0A0MT08 1334 aa9.24□□□□□ -0.93
PDLIM5-204ENST00000380176 TNRC6CQ9HCJ0 1690 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 CTAGE5O15320 804 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 FMNL1O95466 1100 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 CPLX2Q6PUV4 134 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 NRBP1Q9UHY1 535 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 SBF2Q86WG5 1849 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 THSD7AQ9UPZ6 1657 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 SSRP1Q08945 709 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 SLC39A14Q15043 492 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 PLA2G4DQ86XP0 818 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 NYXQ9GZU5 481 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 RTCBQ9Y3I0 505 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 PRDM1O75626 825 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 IFNAR1P17181 557 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 U2AF2P26368 475 aaKnown RBP eCLIP9.23□□□□□ -0.937e-13■■■■□ 20.7
PDLIM5-204ENST00000380176 MECOMQ03112 1051 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 IRF5Q13568 498 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 PTPAQ15257 358 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 STX1AQ16623 288 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 NBPF11Q86T75 865 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 NUP133Q8WUM0 1156 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 PIBF1Q8WXW3 757 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 NSUN4Q96CB9 384 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 MAP3K14Q99558 947 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 SDF4Q9BRK5 362 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 TRIM5Q9C035 493 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 ANAPC4Q9UJX5 808 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 PYCARDQ9ULZ3 195 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 KCNJ14Q9UNX9 436 aa9.23□□□□□ -0.93
PDLIM5-204ENST00000380176 LY75O60449 1722 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 PTGS1P23219 599 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 PRDX5P30044 214 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 ZNF75DP51815 510 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 GNL2Q13823 731 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 SEC23AQ15436 765 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 RTN1Q16799 776 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 TPTE2Q6XPS3 522 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 DHX40Q8IX18 779 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 ZNF654Q8IZM8 581 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 RETREG2Q8NC44 543 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 NID2Q14112 1375 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 ERICH2A1L162 156 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 BTBD18B2RXH4 712 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 ZNF202O95125 648 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 PFKFB1P16118 471 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 CHAF1AQ13111 956 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 NOLC1Q14978 699 aaKnown RBP eCLIP9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 SART3Q15020 963 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 CLIC6Q96NY7 704 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 RNF41Q9H4P4 317 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 AATFQ9NY61 560 aaKnown RBP eCLIP9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 DUOX1Q9NRD9 1551 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 BAZ2BQ9UIF8 2168 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 TNKSO95271 1327 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 STK36Q9NRP7 1315 aa9.22□□□□□ -0.93
PDLIM5-204ENST00000380176 CCDC88AQ3V6T2 1871 aa9.21□□□□□ -0.93
PDLIM5-204ENST00000380176 HIBADHP31937 336 aaKnown RBP9.21□□□□□ -0.93
PDLIM5-204ENST00000380176 TRIM29Q14134 588 aa9.21□□□□□ -0.93
PDLIM5-204ENST00000380176 CTR9Q6PD62 1173 aa9.21□□□□□ -0.93
PDLIM5-204ENST00000380176 SHC4Q6S5L8 630 aa9.21□□□□□ -0.93
PDLIM5-204ENST00000380176 CRACR2BQ8N4Y2 399 aaPredicted RBP9.21□□□□□ -0.93
PDLIM5-204ENST00000380176 ENAHQ8N8S7 591 aaPredicted RBP9.21□□□□□ -0.93
PDLIM5-204ENST00000380176 FANCBQ8NB91 859 aa9.21□□□□□ -0.93
PDLIM5-204ENST00000380176 SHISA4Q96DD7 197 aa9.21□□□□□ -0.93
PDLIM5-204ENST00000380176 ZFP91Q96JP5 570 aaPredicted RBP9.21□□□□□ -0.93
PDLIM5-204ENST00000380176 UBAC1Q9BSL1 405 aa9.21□□□□□ -0.93
PDLIM5-204ENST00000380176 USP17L12C9JPN9 530 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms