RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 IFNAR1P17181 557 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 MSNP26038 577 aaKnown RBP12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 GUCY1B3Q02153 619 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 KIF23Q02241 960 aaPredicted RBP12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 TRIM29Q14134 588 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 NFIXQ14938 502 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 NTRK3Q16288 839 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 TPRNQ4KMQ1 711 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 MYSM1Q5VVJ2 828 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 ADGRA1Q86SQ6 560 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 MICU3Q86XE3 530 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 FAM200AQ8TCP9 573 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 NSUN4Q96CB9 384 aaKnown RBP12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 ALG1Q9BT22 464 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 RNF181Q9P0P0 153 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 ARFGEF1Q9Y6D6 1849 aa12.17□□□□□ -0.46
POLR2J3-201ENST00000379340 FMNL1O95466 1100 aaPredicted RBP12.16□□□□□ -0.46
POLR2J3-201ENST00000379340 FGRP09769 529 aa12.16□□□□□ -0.46
POLR2J3-201ENST00000379340 CDC27P30260 824 aa12.16□□□□□ -0.46
POLR2J3-201ENST00000379340 FAM160A1Q05DH4 1040 aa12.16□□□□□ -0.46
POLR2J3-201ENST00000379340 TYRO3Q06418 890 aa12.16□□□□□ -0.46
POLR2J3-201ENST00000379340 SSRP1Q08945 709 aaKnown RBP12.16□□□□□ -0.46
POLR2J3-201ENST00000379340 ADALQ6DHV7 355 aa12.16□□□□□ -0.46
POLR2J3-201ENST00000379340 CCAR1Q8IX12 1150 aaKnown RBP12.16□□□□□ -0.46
POLR2J3-201ENST00000379340 UBAC1Q9BSL1 405 aa12.16□□□□□ -0.46
POLR2J3-201ENST00000379340 CRNKL1Q9BZJ0 848 aaKnown RBP12.16□□□□□ -0.46
POLR2J3-201ENST00000379340 TOMM22Q9NS69 142 aa12.16□□□□□ -0.46
POLR2J3-201ENST00000379340 ATP8A2Q9NTI2 1148 aa12.16□□□□□ -0.46
POLR2J3-201ENST00000379340 NOL7Q9UMY1 257 aaKnown RBP12.16□□□□□ -0.46
POLR2J3-201ENST00000379340 XDHP47989 1333 aa12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 NR1I2O75469 434 aa12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 SLC3A2P08195 630 aaKnown RBP12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 CHRNA5P30532 468 aa12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 ME1P48163 572 aa12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 ST5P78524 1137 aa12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 STK38Q15208 465 aa12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 RTN1Q16799 776 aa12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 RRP12Q5JTH9 1297 aaKnown RBP12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 SASS6Q6UVJ0 657 aa12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 TRIM22Q8IYM9 498 aa12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 NLGN1Q8N2Q7 840 aa12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 LINC00301Q8NCQ3 95 aa12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 WDR66Q8TBY9 1149 aa12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 MRPS27Q92552 414 aaKnown RBP12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 TACC3Q9Y6A5 838 aa12.15□□□□□ -0.46
POLR2J3-201ENST00000379340 BAZ2AQ9UIF9 1905 aaKnown RBP12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 SBF1O95248 1867 aa12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 KINO60870 393 aaKnown RBP12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 MECOMQ03112 1051 aa12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 CEBPZQ03701 1054 aaKnown RBP12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 SF3A1Q15459 793 aaKnown RBP12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 SBK1Q52WX2 424 aa12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 KRT40Q6A162 431 aa12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 PRR5LQ6MZQ0 368 aa12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 ZNF804AQ7Z570 1209 aa12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 RAB11FIP4Q86YS3 637 aa12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 CERS3Q8IU89 383 aa12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 NKX2-3Q8TAU0 364 aa12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 SDR42E1Q8WUS8 393 aa12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 FAM217BQ9NTX9 383 aaPredicted RBP12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 ARPP21Q9UBL0 812 aaPredicted RBP12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 MRVI1Q9Y6F6 885 aa12.14□□□□□ -0.47
POLR2J3-201ENST00000379340 MINDY4BA8MYZ0 360 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 SPTLC2O15270 562 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 ORC4O43929 436 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 DEXIO95424 95 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 CALM1P0DP23 149 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 CALM2P0DP24 149 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 CALM3P0DP25 149 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 DYNLL1P63167 89 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 GSTO1P78417 241 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 DDR1Q08345 913 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 GNL2Q13823 731 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 SEC23AQ15436 765 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 CAMK4Q16566 473 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 CRY2Q49AN0 593 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 ANO1Q5XXA6 986 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 ZNF654Q8IZM8 581 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 FSIP1Q8NA03 581 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 SMC1BQ8NDV3 1235 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 ENGASEQ8NFI3 743 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 RPGRQ92834 1020 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 RBM17Q96I25 401 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 SENP2Q9HC62 589 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 PCDHA7Q9UN72 937 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 LRRC37AA6NMS7 1700 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 RANBP6O60518 1105 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 PPP6R2O75170 966 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 U2AF2P26368 475 aaKnown RBP eCLIP12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 KLRK1P26718 216 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 RASSF7Q02833 373 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 SAFBQ15424 915 aaKnown RBP eCLIP12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 OTUD7BQ6GQQ9 843 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 CTR9Q6PD62 1173 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 TMC4Q7Z404 712 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 IQCA1Q86XH1 822 aa12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 DZIP1Q86YF9 867 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 TDRD7Q8NHU6 1098 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-201ENST00000379340 ZNF384Q8TF68 577 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms