RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 GPR101Q96P66 508 aaPredicted RBP22.28■■□□□ 1.16
PCDHA4-201ENST00000378125 ZNF202O95125 648 aa22.27■■□□□ 1.16
PCDHA4-201ENST00000378125 TRIM22Q8IYM9 498 aa22.27■■□□□ 1.16
PCDHA4-201ENST00000378125 ANKRD2Q9GZV1 360 aa22.27■■□□□ 1.16
PCDHA4-201ENST00000378125 ANKIB1Q9P2G1 1089 aa22.27■■□□□ 1.16
PCDHA4-201ENST00000378125 ZNF75DP51815 510 aa22.26■■□□□ 1.15
PCDHA4-201ENST00000378125 ISM2Q6H9L7 571 aa22.26■■□□□ 1.15
PCDHA4-201ENST00000378125 NBPF11Q86T75 865 aa22.26■■□□□ 1.15
PCDHA4-201ENST00000378125 BECN2A8MW95 431 aa22.26■■□□□ 1.15
PCDHA4-201ENST00000378125 U2AF2P26368 475 aaKnown RBP eCLIP22.26■■□□□ 1.15
PCDHA4-201ENST00000378125 DNTTIP2Q5QJE6 756 aaKnown RBP22.26■■□□□ 1.15
PCDHA4-201ENST00000378125 CRACR2BQ8N4Y2 399 aaPredicted RBP22.26■■□□□ 1.15
PCDHA4-201ENST00000378125 ENAHQ8N8S7 591 aaPredicted RBP22.26■■□□□ 1.15
PCDHA4-201ENST00000378125 GJD4Q96KN9 370 aaPredicted RBP22.26■■□□□ 1.15
PCDHA4-201ENST00000378125 PYCARDQ9ULZ3 195 aa22.26■■□□□ 1.15
PCDHA4-201ENST00000378125 CYP2D6P10635 497 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 NFIXQ14938 502 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 SEC23AQ15436 765 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 CCDC186Q7Z3E2 898 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 DIS3L2Q8IYB7 885 aaKnown RBP22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 ZSCAN10Q96SZ4 725 aaPredicted RBP22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 MAP3K14Q99558 947 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 LRRC4BQ9NT99 713 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 ANO10Q9NW15 660 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 ANAPC4Q9UJX5 808 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 NMT2O60551 498 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 ATP2B1P20020 1258 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 NOLC1Q14978 699 aaKnown RBP eCLIP22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 PTPAQ15257 358 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 SPECC1Q5M775 1068 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 PLA2G4DQ86XP0 818 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 PIBF1Q8WXW3 757 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 STK36Q9NRP7 1315 aa22.25■■□□□ 1.15
PCDHA4-201ENST00000378125 MYH2Q9UKX2 1941 aa22.24■■□□□ 1.15
PCDHA4-201ENST00000378125 MMP1P03956 469 aa22.24■■□□□ 1.15
PCDHA4-201ENST00000378125 NR5A1Q13285 461 aa22.24■■□□□ 1.15
PCDHA4-201ENST00000378125 DHX40Q8IX18 779 aaKnown RBP22.24■■□□□ 1.15
PCDHA4-201ENST00000378125 TMTC2Q8N394 836 aa22.24■■□□□ 1.15
PCDHA4-201ENST00000378125 AOPEPQ8N6M6 819 aa22.24■■□□□ 1.15
PCDHA4-201ENST00000378125 BRIP1Q9BX63 1249 aa22.24■■□□□ 1.15
PCDHA4-201ENST00000378125 MYH13Q9UKX3 1938 aa22.24■■□□□ 1.15
PCDHA4-201ENST00000378125 GOLGA6L6A8MZA4 724 aa22.24■■□□□ 1.15
PCDHA4-201ENST00000378125 CMA1P23946 247 aa22.24■■□□□ 1.15
PCDHA4-201ENST00000378125 FAM47AQ5JRC9 791 aa22.24■■□□□ 1.15
PCDHA4-201ENST00000378125 SHC4Q6S5L8 630 aa22.24■■□□□ 1.15
PCDHA4-201ENST00000378125 KIAA1468Q9P260 1216 aa22.24■■□□□ 1.15
PCDHA4-201ENST00000378125 NHSQ6T4R5 1651 aa22.23■■□□□ 1.15
PCDHA4-201ENST00000378125 DPCR1Q3MIW9 517 aa22.23■■□□□ 1.15
PCDHA4-201ENST00000378125 IFIT1BQ5T764 474 aaKnown RBP22.23■■□□□ 1.15
PCDHA4-201ENST00000378125 NOSTRINQ8IVI9 506 aa22.23■■□□□ 1.15
PCDHA4-201ENST00000378125 OXER1Q8TDS5 423 aa22.23■■□□□ 1.15
PCDHA4-201ENST00000378125 WASF1Q92558 559 aa22.23■■□□□ 1.15
PCDHA4-201ENST00000378125 TNRC6CQ9HCJ0 1690 aaKnown RBP22.23■■□□□ 1.15
PCDHA4-201ENST00000378125 SEMA3EO15041 775 aa22.23■■□□□ 1.15
PCDHA4-201ENST00000378125 DCP1AQ9NPI6 582 aaPredicted RBP22.23■■□□□ 1.15
PCDHA4-201ENST00000378125 DEXIO95424 95 aa22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 SLC3A2P08195 630 aaKnown RBP22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 LRMPQ12912 555 aa22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 SAFBQ15424 915 aaKnown RBP eCLIP22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 ZRSR1Q15695 479 aaKnown RBP22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 CNBD1Q8NA66 436 aa22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 CLIP2Q9UDT6 1046 aa22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 COL24A1Q17RW2 1714 aa22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 CCDC196A0A1B0GTZ2 297 aa22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 RGL2O15211 777 aa22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 PLEKHA8P1O95397 391 aa22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 CAVIN2O95810 425 aa22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 SYKP43405 635 aa22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 DZIP1Q86YF9 867 aaKnown RBP22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 CEP57L1Q8IYX8 460 aa22.22■■□□□ 1.15
PCDHA4-201ENST00000378125 THSD7AQ9UPZ6 1657 aa22.21■■□□□ 1.15
PCDHA4-201ENST00000378125 AFF2P51816 1311 aa22.21■■□□□ 1.15
PCDHA4-201ENST00000378125 TOB1P50616 345 aaPredicted RBP22.21■■□□□ 1.15
PCDHA4-201ENST00000378125 SEPT12Q8IYM1 358 aa22.21■■□□□ 1.15
PCDHA4-201ENST00000378125 CRNKL1Q9BZJ0 848 aaKnown RBP22.21■■□□□ 1.15
PCDHA4-201ENST00000378125 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.2■■□□□ 1.15
PCDHA4-201ENST00000378125 IQCA1Q86XH1 822 aa22.2■■□□□ 1.15
PCDHA4-201ENST00000378125 VPS54Q9P1Q0 977 aa22.2■■□□□ 1.15
PCDHA4-201ENST00000378125 NID2Q14112 1375 aa22.2■■□□□ 1.14
PCDHA4-201ENST00000378125 DUOX1Q9NRD9 1551 aa22.2■■□□□ 1.14
PCDHA4-201ENST00000378125 SPATA31A6Q5VVP1 1343 aa22.2■■□□□ 1.14
PCDHA4-201ENST00000378125 PPP6R2O75170 966 aa22.2■■□□□ 1.14
PCDHA4-201ENST00000378125 SHISA4Q96DD7 197 aa22.2■■□□□ 1.14
PCDHA4-201ENST00000378125 GRIN1Q05586 938 aa22.19■■□□□ 1.14
PCDHA4-201ENST00000378125 GRIK5Q16478 980 aa22.19■■□□□ 1.14
PCDHA4-201ENST00000378125 CATIPQ7Z7H3 387 aa22.19■■□□□ 1.14
PCDHA4-201ENST00000378125 JMYQ8N9B5 988 aa22.19■■□□□ 1.14
PCDHA4-201ENST00000378125 TAF1LQ8IZX4 1826 aa22.19■■□□□ 1.14
PCDHA4-201ENST00000378125 USP17L8P0C7I0 530 aa22.19■■□□□ 1.14
PCDHA4-201ENST00000378125 AKAP17AQ02040 695 aaKnown RBP22.19■■□□□ 1.14
PCDHA4-201ENST00000378125 GRAPQ13588 217 aa22.19■■□□□ 1.14
PCDHA4-201ENST00000378125 CCDC144BQ3MJ40 725 aa22.19■■□□□ 1.14
PCDHA4-201ENST00000378125 GRAPLQ8TC17 118 aaPredicted RBP22.19■■□□□ 1.14
PCDHA4-201ENST00000378125 V9GY48 417 aaPredicted RBP22.19■■□□□ 1.14
PCDHA4-201ENST00000378125 FAM205CA6NFA0 338 aa22.18■■□□□ 1.14
PCDHA4-201ENST00000378125 DIXDC1Q155Q3 683 aa22.18■■□□□ 1.14
PCDHA4-201ENST00000378125 MTA3Q9BTC8 594 aa22.18■■□□□ 1.14
PCDHA4-201ENST00000378125 CABP5Q9NP86 173 aa22.18■■□□□ 1.14
PCDHA4-201ENST00000378125 MCM9Q9NXL9 1143 aa22.18■■□□□ 1.14
PCDHA4-201ENST00000378125 PCDHB6Q9Y5E3 794 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms