RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 FBXO38Q6PIJ6 1188 aa9.87□□□□□ -0.83
PCDH9-202ENST00000377865 RXRAP19793 462 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 GBP6Q6ZN66 633 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 STXBP4Q6ZWJ1 553 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 ZCRB1Q8TBF4 217 aaKnown RBP9.86□□□□□ -0.83
PCDH9-202ENST00000377865 CLIC4Q9Y696 253 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 POTEJP0CG39 1038 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 HSPD1P10809 573 aaKnown RBP9.86□□□□□ -0.83
PCDH9-202ENST00000377865 DRC1Q96MC2 740 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 OSBPL5Q9H0X9 879 aaPredicted RBP9.86□□□□□ -0.83
PCDH9-202ENST00000377865 ZNF76P36508 570 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 ADKP55263 362 aaKnown RBP9.86□□□□□ -0.83
PCDH9-202ENST00000377865 SLC39A14Q15043 492 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 C8orf74Q6P047 294 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 CDC23Q9UJX2 597 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 LDHCP07864 332 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 VSTM4Q8IW00 320 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 VPS16Q9H269 839 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 SERTAD1Q9UHV2 236 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 PCDH11XQ9BZA7 1347 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 PCDH11YQ9BZA8 1340 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 USP42Q9H9J4 1324 aaKnown RBP9.86□□□□□ -0.83
PCDH9-202ENST00000377865 ARHGEF40Q8TER5 1519 aa9.86□□□□□ -0.83
PCDH9-202ENST00000377865 VWA3AA6NCI4 1184 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 MCM7P33993 719 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 MMRN2Q9H8L6 949 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 SWAP70Q9UH65 585 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 MED23Q9ULK4 1368 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 NCAPD2Q15021 1401 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 BAG3O95817 575 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 ATP2B2Q01814 1243 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 TTC38Q5R3I4 469 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 NOSTRINQ8IVI9 506 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 FBXO18Q8NFZ0 1043 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 C6orf50Q9HD87 102 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 ADGRL3Q9HAR2 1447 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 GCP02774 474 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 ERCC5P28715 1186 aaPredicted RBP9.85□□□□□ -0.83
PCDH9-202ENST00000377865 TIMM10P62072 90 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 ZMYM1Q5SVZ6 1142 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 SPATA1Q5VX52 437 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 CNNM4Q6P4Q7 775 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 FMNL3Q8IVF7 1028 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 LINC00301Q8NCQ3 95 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 NOC4LQ9BVI4 516 aaKnown RBP9.85□□□□□ -0.83
PCDH9-202ENST00000377865 SAR1BQ9Y6B6 198 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 CCDC151A5D8V7 595 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 MBD4O95243 580 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 CETN1Q12798 172 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 NELFBQ8WX92 580 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 CCDC114Q96M63 670 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 PLCD4Q9BRC7 762 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 ATP10DQ9P241 1426 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 MACROD2A1Z1Q3 448 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 CTIFO43310 598 aaKnown RBP9.85□□□□□ -0.83
PCDH9-202ENST00000377865 KIAA0753Q2KHM9 967 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 DPCR1Q3MIW9 517 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 VWA3BQ502W6 1294 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 FANCLQ9NW38 375 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 FBXO3Q9UK99 471 aa9.85□□□□□ -0.83
PCDH9-202ENST00000377865 KRT9P35527 623 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 ACTN2P35609 894 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 PAK2Q13177 524 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 ZNF174Q15697 407 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 NBPF14Q5TI25 921 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 TBC1D5Q92609 795 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 KCNF1Q9H3M0 494 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 CDC42BPGQ6DT37 1551 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 NDUFAB1O14561 156 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 PNMA6AP0CW24 399 aaPredicted RBP9.84□□□□□ -0.83
PCDH9-202ENST00000377865 KCNJ6P48051 423 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 HAUS4Q9H6D7 363 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 NOX5Q96PH1 765 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 SPAG5Q96R06 1193 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 DEPDC5O75140 1603 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 CIAO1O76071 339 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 APBA1Q02410 837 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 TBC1D8BQ0IIM8 1120 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 PUM3Q15397 648 aaKnown RBP9.84□□□□□ -0.83
PCDH9-202ENST00000377865 LONRF2Q1L5Z9 754 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 HEATR3Q7Z4Q2 680 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 ERMNQ8TAM6 284 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 IPO4Q8TEX9 1081 aaKnown RBP9.84□□□□□ -0.83
PCDH9-202ENST00000377865 C19orf44Q9H6X5 657 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 EFCC1Q9HA90 598 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 METP08581 1390 aa9.84□□□□□ -0.83
PCDH9-202ENST00000377865 ZEB2O60315 1214 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 CYP21A2P08686 494 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 TOB2Q14106 344 aaPredicted RBP9.83□□□□□ -0.84
PCDH9-202ENST00000377865 NBPF6Q5VWK0 638 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 ZNF589Q86UQ0 364 aaPredicted RBP9.83□□□□□ -0.84
PCDH9-202ENST00000377865 NBPF4Q96M43 638 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 NAP1L4Q99733 375 aaKnown RBP9.83□□□□□ -0.84
PCDH9-202ENST00000377865 EHMT1Q9H9B1 1298 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 NRKQ7Z2Y5 1582 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 CROCCP2Q86T23 111 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 TRMT44Q8IYL2 757 aaKnown RBP9.83□□□□□ -0.84
PCDH9-202ENST00000377865 CCDC26Q8TAB7 109 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 IFT81Q8WYA0 676 aa9.83□□□□□ -0.84
PCDH9-202ENST00000377865 LRRC45Q96CN5 670 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms