RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SLC9C1Q4G0N8 1177 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 MUM1L1Q5H9M0 696 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 MSANTD4Q8NCY6 345 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 VCXQ9H320 206 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 UTYO14607 1347 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 NAP1L1P55209 391 aaKnown RBP5.53□□□□□ -1.52
PCDH9-201ENST00000377861 HSP90AA5PQ58FG0 334 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 GOLGA6CA6NDK9 693 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 GOLGA6BA6NDN3 693 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 GOLGA6DP0CG33 693 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 EIF4A2Q14240 407 aaKnown RBP5.53□□□□□ -1.52
PCDH9-201ENST00000377861 GOLGA6AQ9NYA3 693 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 ANKRD62A6NC57 917 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 BCRP11274 1271 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 CUL5Q93034 780 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 PPP2R5AQ15172 486 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 PUM3Q15397 648 aaKnown RBP5.53□□□□□ -1.52
PCDH9-201ENST00000377861 MAP3K21Q5TCX8 1036 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 TRIM11Q96F44 468 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 SRGAP1Q7Z6B7 1085 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 FAM96AQ9H5X1 160 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 MKNK2Q9HBH9 465 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 MAP3K2Q9Y2U5 619 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 AKR1B10O60218 316 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 WTAPQ15007 396 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 ARHGAP18Q8N392 663 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 TNNQ9UQP3 1299 aa5.53□□□□□ -1.52
PCDH9-201ENST00000377861 FAM124BQ9H5Z6 455 aaPredicted RBP5.53□□□□□ -1.52
PCDH9-201ENST00000377861 LMNAP02545 664 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 FRMD8Q9BZ67 464 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 PRDM16Q9HAZ2 1276 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 NLRP5P59047 1200 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 NMIQ13287 307 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 NOSTRINQ8IVI9 506 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 PCDHB13Q9Y5F0 798 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 CLASP1Q7Z460 1538 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 AP3B1O00203 1094 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 ATP5BP06576 529 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 ANO6Q4KMQ2 910 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 SGMS1Q86VZ5 419 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 SH3TC1Q8TE82 1336 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 YTHDC2Q9H6S0 1430 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 CHMP4BP1P59074 171 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 LRRC63Q05C16 580 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 BEND3Q5T5X7 828 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 FANCBQ8NB91 859 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 ZCRB1Q8TBF4 217 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 INTUQ9ULD6 942 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 SLC27A2O14975 620 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 C4orf22Q6V702 233 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 RBM43Q6ZSC3 357 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 HPS3Q969F9 1004 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 EIF4A1P60842 406 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 SNX14Q9Y5W7 946 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 RASA3Q14644 834 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 PBKQ96KB5 322 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 A0A087WUV0 522 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 DDX41Q9UJV9 622 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 UTP11Q9Y3A2 253 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 SV2BQ7L1I2 683 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 MCM10Q7L590 875 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 KRT25Q7Z3Z0 450 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 GINM1Q9NU53 330 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 SNUPNO95149 360 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 RTN1Q16799 776 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 HAUS3Q68CZ6 603 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 MRPL40Q9NQ50 206 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 MYBPC2Q14324 1141 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 SLC9C2Q5TAH2 1124 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 RBM33Q96EV2 1170 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 POTEFA5A3E0 1075 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 EXOC5O00471 708 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 POTEIP0CG38 1075 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 POTEEQ6S8J3 1075 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 TDO2P48775 406 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 AK2P54819 239 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 METTL24Q5JXM2 366 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 CC2D2BQ6DHV5 1058 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 NCAPD2Q15021 1401 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 GCKRQ14397 625 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 CYB5RLQ6IPT4 315 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 MAST3O60307 1309 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 FIGNQ5HY92 759 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 RSRC1Q96IZ7 334 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 KAT14Q9H8E8 782 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 ACTR5Q9H9F9 607 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 SMTNP53814 917 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 SYDE1Q6ZW31 735 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 RTN4Q9NQC3 1192 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 CCDC188H7C350 402 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 TIPINQ9BVW5 301 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 DHX38Q92620 1227 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 SAMD15Q9P1V8 674 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 PPP4R3AQ6IN85 833 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 EXOC6BQ9Y2D4 811 aa5.52□□□□□ -1.53
PCDH9-201ENST00000377861 CDK13Q14004 1512 aaKnown RBP5.52□□□□□ -1.53
PCDH9-201ENST00000377861 N4BP1O75113 896 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 MKRN3Q13064 507 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 ATL2Q8NHH9 583 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 L2HGDHQ9H9P8 463 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms