RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 GJA8P48165 433 aa23.59■■□□□ 1.37
CBWD3-204ENST00000377349 RRP1BQ14684 758 aaKnown RBP23.59■■□□□ 1.37
CBWD3-204ENST00000377349 C1orf115Q9H7X2 142 aa23.59■■□□□ 1.37
CBWD3-204ENST00000377349 H0YGN5 161 aa23.59■■□□□ 1.37
CBWD3-204ENST00000377349 MAP4K4O95819 1239 aaPredicted RBP23.59■■□□□ 1.37
CBWD3-204ENST00000377349 GJB1P08034 283 aa23.59■■□□□ 1.37
CBWD3-204ENST00000377349 TREML2Q5T2D2 321 aa23.59■■□□□ 1.37
CBWD3-204ENST00000377349 OSBPL5Q9H0X9 879 aaPredicted RBP23.59■■□□□ 1.37
CBWD3-204ENST00000377349 AGTPBP1Q9UPW5 1226 aa23.59■■□□□ 1.37
CBWD3-204ENST00000377349 LAMA3Q16787 3333 aa23.58■■□□□ 1.36
CBWD3-204ENST00000377349 GORABQ5T7V8 394 aa23.58■■□□□ 1.36
CBWD3-204ENST00000377349 PIAS4Q8N2W9 510 aaPredicted RBP23.58■■□□□ 1.36
CBWD3-204ENST00000377349 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.58■■□□□ 1.36
CBWD3-204ENST00000377349 MYH1P12882 1939 aa23.57■■□□□ 1.36
CBWD3-204ENST00000377349 LDHCP07864 332 aa23.57■■□□□ 1.36
CBWD3-204ENST00000377349 FLT3LGP49771 235 aa23.57■■□□□ 1.36
CBWD3-204ENST00000377349 GSTO1P78417 241 aa23.57■■□□□ 1.36
CBWD3-204ENST00000377349 G3BP1Q13283 466 aaKnown RBP eCLIP23.57■■□□□ 1.36
CBWD3-204ENST00000377349 OS9Q13438 667 aaPredicted RBP23.57■■□□□ 1.36
CBWD3-204ENST00000377349 POLA2Q14181 598 aa23.57■■□□□ 1.36
CBWD3-204ENST00000377349 SLAIN1Q8ND83 568 aa23.57■■□□□ 1.36
CBWD3-204ENST00000377349 RNF208Q9H0X6 261 aa23.57■■□□□ 1.36
CBWD3-204ENST00000377349 RAI14Q9P0K7 980 aa23.57■■□□□ 1.36
CBWD3-204ENST00000377349 NKX2-3Q8TAU0 364 aa23.56■■□□□ 1.36
CBWD3-204ENST00000377349 SH3RF3Q8TEJ3 882 aaPredicted RBP23.56■■□□□ 1.36
CBWD3-204ENST00000377349 UNC93B1Q9H1C4 597 aa23.56■■□□□ 1.36
CBWD3-204ENST00000377349 SMCR8Q8TEV9 937 aaPredicted RBP23.55■■□□□ 1.36
CBWD3-204ENST00000377349 ADCY3O60266 1144 aa23.54■■□□□ 1.36
CBWD3-204ENST00000377349 UQCRFS1P1P0C7P4 283 aa23.54■■□□□ 1.36
CBWD3-204ENST00000377349 ELNP15502 786 aa23.54■■□□□ 1.36
CBWD3-204ENST00000377349 UBXN2AP68543 259 aa23.54■■□□□ 1.36
CBWD3-204ENST00000377349 SPP2Q13103 211 aa23.54■■□□□ 1.36
CBWD3-204ENST00000377349 IRF5Q13568 498 aa23.54■■□□□ 1.36
CBWD3-204ENST00000377349 TEX11Q8IYF3 940 aa23.54■■□□□ 1.36
CBWD3-204ENST00000377349 ANKRD13CQ8N6S4 541 aa23.54■■□□□ 1.36
CBWD3-204ENST00000377349 PROCA1Q8NCQ7 364 aaPredicted RBP23.54■■□□□ 1.36
CBWD3-204ENST00000377349 GPR108Q9NPR9 543 aa23.54■■□□□ 1.36
CBWD3-204ENST00000377349 TNPO2O14787 897 aaKnown RBP23.53■■□□□ 1.36
CBWD3-204ENST00000377349 CAP2P40123 477 aa23.53■■□□□ 1.36
CBWD3-204ENST00000377349 TNNI3KQ59H18 835 aa23.53■■□□□ 1.36
CBWD3-204ENST00000377349 ADGRA1Q86SQ6 560 aa23.53■■□□□ 1.36
CBWD3-204ENST00000377349 ZNF280CQ8ND82 737 aa23.53■■□□□ 1.36
CBWD3-204ENST00000377349 SSH3Q8TE77 659 aa23.53■■□□□ 1.36
CBWD3-204ENST00000377349 PXYLP1Q8TE99 480 aa23.53■■□□□ 1.36
CBWD3-204ENST00000377349 U2AF1L4Q8WU68 220 aaKnown RBP23.53■■□□□ 1.36
CBWD3-204ENST00000377349 DBNDD2Q9BQY9 259 aa23.53■■□□□ 1.36
CBWD3-204ENST00000377349 SNRKQ9NRH2 765 aa23.53■■□□□ 1.36
CBWD3-204ENST00000377349 BIN2Q9UBW5 565 aaPredicted RBP23.53■■□□□ 1.36
CBWD3-204ENST00000377349 FPGT-TNNI3KV9GXZ4 949 aa23.53■■□□□ 1.36
CBWD3-204ENST00000377349 RLBP1P12271 317 aa23.52■■□□□ 1.36
CBWD3-204ENST00000377349 FAM110CQ1W6H9 321 aa23.52■■□□□ 1.36
CBWD3-204ENST00000377349 LRP2BPQ9P2M1 347 aa23.52■■□□□ 1.36
CBWD3-204ENST00000377349 INHAP05111 366 aa23.51■■□□□ 1.35
CBWD3-204ENST00000377349 HMGCS2P54868 508 aa23.51■■□□□ 1.35
CBWD3-204ENST00000377349 JAG1P78504 1218 aa23.51■■□□□ 1.35
CBWD3-204ENST00000377349 DNAJC18Q9H819 358 aa23.51■■□□□ 1.35
CBWD3-204ENST00000377349 HERC5Q9UII4 1024 aaKnown RBP23.51■■□□□ 1.35
CBWD3-204ENST00000377349 CYP2E1P05181 493 aaPredicted RBP23.5■■□□□ 1.35
CBWD3-204ENST00000377349 ATP8B2P98198 1209 aa23.5■■□□□ 1.35
CBWD3-204ENST00000377349 SH3D19Q5HYK7 790 aa23.5■■□□□ 1.35
CBWD3-204ENST00000377349 AATFQ9NY61 560 aaKnown RBP eCLIP23.5■■□□□ 1.35
CBWD3-204ENST00000377349 PNMA3Q9UL41 463 aa23.5■■□□□ 1.35
CBWD3-204ENST00000377349 SGPL1O95470 568 aa23.5■■□□□ 1.35
CBWD3-204ENST00000377349 PPP4CP60510 307 aa23.5■■□□□ 1.35
CBWD3-204ENST00000377349 METTL16Q86W50 562 aaKnown RBP23.5■■□□□ 1.35
CBWD3-204ENST00000377349 TBC1D2Q9BYX2 928 aa23.5■■□□□ 1.35
CBWD3-204ENST00000377349 USP17L5A8MUK1 530 aa23.49■■□□□ 1.35
CBWD3-204ENST00000377349 NAA16Q6N069 864 aaPredicted RBP23.49■■□□□ 1.35
CBWD3-204ENST00000377349 PANK1Q8TE04 598 aa23.49■■□□□ 1.35
CBWD3-204ENST00000377349 DPF3Q92784 378 aa23.49■■□□□ 1.35
CBWD3-204ENST00000377349 PAK6Q9NQU5 681 aaPredicted RBP23.49■■□□□ 1.35
CBWD3-204ENST00000377349 PI4KBQ9UBF8 816 aa23.49■■□□□ 1.35
CBWD3-204ENST00000377349 FLT1P17948 1338 aa23.48■■□□□ 1.35
CBWD3-204ENST00000377349 SURF6O75683 361 aaKnown RBP23.48■■□□□ 1.35
CBWD3-204ENST00000377349 FARP2O94887 1054 aaPredicted RBP23.48■■□□□ 1.35
CBWD3-204ENST00000377349 SHROOM1Q2M3G4 852 aaPredicted RBP23.48■■□□□ 1.35
CBWD3-204ENST00000377349 TTC39AQ5SRH9 613 aa23.48■■□□□ 1.35
CBWD3-204ENST00000377349 CHRDL2Q6WN34 429 aa23.48■■□□□ 1.35
CBWD3-204ENST00000377349 ZNF512BQ96KM6 892 aaPredicted RBP23.48■■□□□ 1.35
CBWD3-204ENST00000377349 ASCC2Q9H1I8 757 aaPredicted RBP23.48■■□□□ 1.35
CBWD3-204ENST00000377349 TGFBRAP1Q8WUH2 860 aa23.47■■□□□ 1.35
CBWD3-204ENST00000377349 WDR18Q9BV38 432 aa23.47■■□□□ 1.35
CBWD3-204ENST00000377349 DHX36Q9H2U1 1008 aaKnown RBP23.47■■□□□ 1.35
CBWD3-204ENST00000377349 PRO3102Q9H379 93 aa23.47■■□□□ 1.35
CBWD3-204ENST00000377349 PIH1D3Q9NQM4 214 aaKnown RBP23.47■■□□□ 1.35
CBWD3-204ENST00000377349 TLR7Q9NYK1 1049 aaKnown RBP23.47■■□□□ 1.35
CBWD3-204ENST00000377349 DBNLQ9UJU6 430 aaKnown RBP23.47■■□□□ 1.35
CBWD3-204ENST00000377349 NOP58Q9Y2X3 529 aaKnown RBP23.47■■□□□ 1.35
CBWD3-204ENST00000377349 ZAP70P43403 619 aa23.46■■□□□ 1.35
CBWD3-204ENST00000377349 GCLCP48506 637 aaPredicted RBP23.46■■□□□ 1.35
CBWD3-204ENST00000377349 CCDC158Q5M9N0 1113 aa23.46■■□□□ 1.35
CBWD3-204ENST00000377349 MAPKAPK5Q8IW41 473 aa23.46■■□□□ 1.35
CBWD3-204ENST00000377349 COA7Q96BR5 231 aa23.46■■□□□ 1.35
CBWD3-204ENST00000377349 HTATIP2Q9BUP3 242 aa23.46■■□□□ 1.35
CBWD3-204ENST00000377349 GJD2Q9UKL4 321 aa23.46■■□□□ 1.35
CBWD3-204ENST00000377349 DDX60LQ5H9U9 1706 aaKnown RBP23.46■■□□□ 1.35
CBWD3-204ENST00000377349 BAG3O95817 575 aa23.45■■□□□ 1.34
CBWD3-204ENST00000377349 CRISPLD2Q9H0B8 497 aa23.45■■□□□ 1.34
CBWD3-204ENST00000377349 RBM27Q9P2N5 1060 aaKnown RBP23.45■■□□□ 1.34
CBWD3-204ENST00000377349 PLCG2P16885 1265 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms