RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 CCDC152Q4G0S7 254 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 KRBA2Q6ZNG9 492 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 HPSEQ9Y251 543 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 XIRP1Q702N8 1843 aaKnown RBP18.68■□□□□ 0.58
TRIM27-202ENST00000377199 PRR29P0C7W0 189 aa18.68■□□□□ 0.58
TRIM27-202ENST00000377199 LIFRP42702 1097 aa18.68■□□□□ 0.58
TRIM27-202ENST00000377199 PPP1R13BQ96KQ4 1090 aa18.68■□□□□ 0.58
TRIM27-202ENST00000377199 HSD3B7Q9H2F3 369 aa18.68■□□□□ 0.58
TRIM27-202ENST00000377199 CNNM2Q9H8M5 875 aa18.68■□□□□ 0.58
TRIM27-202ENST00000377199 CCDC87Q9NVE4 849 aa18.68■□□□□ 0.58
TRIM27-202ENST00000377199 VPS54Q9P1Q0 977 aa18.68■□□□□ 0.58
TRIM27-202ENST00000377199 MMP1P03956 469 aa18.68■□□□□ 0.58
TRIM27-202ENST00000377199 ELF2Q15723 593 aa18.68■□□□□ 0.58
TRIM27-202ENST00000377199 OSBPL5Q9H0X9 879 aaPredicted RBP18.68■□□□□ 0.58
TRIM27-202ENST00000377199 SERTAD1Q9UHV2 236 aa18.68■□□□□ 0.58
TRIM27-202ENST00000377199 CDK11BP21127 795 aaKnown RBP18.67■□□□□ 0.58
TRIM27-202ENST00000377199 DYNLL1P63167 89 aaKnown RBP18.67■□□□□ 0.58
TRIM27-202ENST00000377199 INTS5Q6P9B9 1019 aaKnown RBP18.67■□□□□ 0.58
TRIM27-202ENST00000377199 ATRNO75882 1429 aa18.67■□□□□ 0.58
TRIM27-202ENST00000377199 NRDCO43847 1150 aa18.67■□□□□ 0.58
TRIM27-202ENST00000377199 CUTAO60888 179 aa18.67■□□□□ 0.58
TRIM27-202ENST00000377199 IFNAR1P17181 557 aa18.67■□□□□ 0.58
TRIM27-202ENST00000377199 BMP6P22004 513 aa18.67■□□□□ 0.58
TRIM27-202ENST00000377199 CASP1P29466 404 aa18.67■□□□□ 0.58
TRIM27-202ENST00000377199 EIF5P55010 431 aaKnown RBP18.67■□□□□ 0.58
TRIM27-202ENST00000377199 PPARAQ07869 468 aa18.67■□□□□ 0.58
TRIM27-202ENST00000377199 ZNF654Q8IZM8 581 aa18.67■□□□□ 0.58
TRIM27-202ENST00000377199 CCDC150Q8NCX0 1101 aa18.67■□□□□ 0.58
TRIM27-202ENST00000377199 BPIFA3Q9BQP9 254 aa18.67■□□□□ 0.58
TRIM27-202ENST00000377199 EVX2Q03828 476 aa18.66■□□□□ 0.58
TRIM27-202ENST00000377199 IMPACTQ9P2X3 320 aa18.66■□□□□ 0.58
TRIM27-202ENST00000377199 ZHX1Q9UKY1 873 aaPredicted RBP18.66■□□□□ 0.58
TRIM27-202ENST00000377199 TNKSO95271 1327 aa18.66■□□□□ 0.58
TRIM27-202ENST00000377199 GTF2E1P29083 439 aaPredicted RBP18.66■□□□□ 0.58
TRIM27-202ENST00000377199 AKAP17AQ02040 695 aaKnown RBP18.66■□□□□ 0.58
TRIM27-202ENST00000377199 KLHL10Q6JEL2 608 aa18.66■□□□□ 0.58
TRIM27-202ENST00000377199 FANCBQ8NB91 859 aa18.66■□□□□ 0.58
TRIM27-202ENST00000377199 AFMP43652 599 aa18.66■□□□□ 0.58
TRIM27-202ENST00000377199 ITPK1Q13572 414 aa18.66■□□□□ 0.58
TRIM27-202ENST00000377199 LRRN4CLQ8ND94 238 aa18.66■□□□□ 0.58
TRIM27-202ENST00000377199 PKNOX2Q96KN3 472 aa18.66■□□□□ 0.58
TRIM27-202ENST00000377199 TUBE1Q9UJT0 475 aa18.66■□□□□ 0.58
TRIM27-202ENST00000377199 SLIT2O94813 1529 aa18.65■□□□□ 0.58
TRIM27-202ENST00000377199 LOC102724428A0A0B4J2F2 783 aa18.65■□□□□ 0.58
TRIM27-202ENST00000377199 C4AP0C0L4 1744 aa18.65■□□□□ 0.58
TRIM27-202ENST00000377199 C4BP0C0L5 1744 aa18.65■□□□□ 0.58
TRIM27-202ENST00000377199 TOP1P11387 765 aaKnown RBP18.65■□□□□ 0.58
TRIM27-202ENST00000377199 SIK1P57059 783 aa18.65■□□□□ 0.58
TRIM27-202ENST00000377199 DDB1Q16531 1140 aa18.65■□□□□ 0.58
TRIM27-202ENST00000377199 NUTM2BA6NNL0 878 aaPredicted RBP18.65■□□□□ 0.58
TRIM27-202ENST00000377199 NUTM2EB1AL46 878 aaPredicted RBP18.65■□□□□ 0.58
TRIM27-202ENST00000377199 ALX1Q15699 326 aa18.65■□□□□ 0.58
TRIM27-202ENST00000377199 C3orf67Q6ZVT6 689 aa18.65■□□□□ 0.58
TRIM27-202ENST00000377199 NUTM2AQ8IVF1 878 aaPredicted RBP18.65■□□□□ 0.58
TRIM27-202ENST00000377199 CRACR2BQ8N4Y2 399 aaPredicted RBP18.65■□□□□ 0.58
TRIM27-202ENST00000377199 WASF1Q92558 559 aa18.65■□□□□ 0.58
TRIM27-202ENST00000377199 DNAI1Q9UI46 699 aa18.65■□□□□ 0.58
TRIM27-202ENST00000377199 MAGEB6P1A0A0J9YX57 407 aa18.64■□□□□ 0.57
TRIM27-202ENST00000377199 COBLO75128 1261 aa18.64■□□□□ 0.57
TRIM27-202ENST00000377199 STAG1Q8WVM7 1258 aa18.64■□□□□ 0.57
TRIM27-202ENST00000377199 STAMQ92783 540 aa18.64■□□□□ 0.57
TRIM27-202ENST00000377199 DHX58Q96C10 678 aa18.64■□□□□ 0.57
TRIM27-202ENST00000377199 TIGD1Q96MW7 591 aa18.64■□□□□ 0.57
TRIM27-202ENST00000377199 POSTNQ15063 836 aa18.64■□□□□ 0.57
TRIM27-202ENST00000377199 ITGB4P16144 1822 aa18.64■□□□□ 0.57
TRIM27-202ENST00000377199 IKBKBO14920 756 aa18.63■□□□□ 0.57
TRIM27-202ENST00000377199 KCNQ2O43526 872 aa18.63■□□□□ 0.57
TRIM27-202ENST00000377199 CAMTA2O94983 1202 aa18.63■□□□□ 0.57
TRIM27-202ENST00000377199 FMR1Q06787 632 aaKnown RBP eCLIP18.63■□□□□ 0.577e-8■■■■□ 20.6
TRIM27-202ENST00000377199 CSRNP2Q9H175 543 aa18.63■□□□□ 0.57
TRIM27-202ENST00000377199 MTMR7Q9Y216 660 aa18.63■□□□□ 0.57
TRIM27-202ENST00000377199 NFE2L3Q9Y4A8 694 aa18.63■□□□□ 0.57
TRIM27-202ENST00000377199 DEXIO95424 95 aa18.63■□□□□ 0.57
TRIM27-202ENST00000377199 STX17P56962 302 aa18.63■□□□□ 0.57
TRIM27-202ENST00000377199 NOM1Q5C9Z4 860 aaKnown RBP18.63■□□□□ 0.57
TRIM27-202ENST00000377199 MAN1B1Q9UKM7 699 aa18.63■□□□□ 0.57
TRIM27-202ENST00000377199 V9GY48 417 aaPredicted RBP18.63■□□□□ 0.57
TRIM27-202ENST00000377199 NUP98P52948 1817 aa18.63■□□□□ 0.57
TRIM27-202ENST00000377199 LRP6O75581 1613 aa18.63■□□□□ 0.57
TRIM27-202ENST00000377199 BAZ2BQ9UIF8 2168 aaKnown RBP18.63■□□□□ 0.57
TRIM27-202ENST00000377199 PLEKHA8P1O95397 391 aa18.63■□□□□ 0.57
TRIM27-202ENST00000377199 EARS2Q5JPH6 523 aaKnown RBP18.63■□□□□ 0.57
TRIM27-202ENST00000377199 CREBRFQ8IUR6 639 aa18.63■□□□□ 0.57
TRIM27-202ENST00000377199 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.63■□□□□ 0.57
TRIM27-202ENST00000377199 FBXO2Q9UK22 296 aaPredicted RBP18.63■□□□□ 0.57
TRIM27-202ENST00000377199 NMT2O60551 498 aa18.62■□□□□ 0.57
TRIM27-202ENST00000377199 ADKP55263 362 aaKnown RBP18.62■□□□□ 0.57
TRIM27-202ENST00000377199 SMARCE1Q969G3 411 aa18.62■□□□□ 0.57
TRIM27-202ENST00000377199 EPSTI1Q96J88 318 aa18.62■□□□□ 0.57
TRIM27-202ENST00000377199 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.62■□□□□ 0.57
TRIM27-202ENST00000377199 GNAT2P19087 354 aa18.62■□□□□ 0.57
TRIM27-202ENST00000377199 ERCC6LQ2NKX8 1250 aa18.62■□□□□ 0.57
TRIM27-202ENST00000377199 ERFEQ4G0M1 354 aa18.62■□□□□ 0.57
TRIM27-202ENST00000377199 ESR2Q92731 530 aa18.62■□□□□ 0.57
TRIM27-202ENST00000377199 MYH3P11055 1940 aa18.62■□□□□ 0.57
TRIM27-202ENST00000377199 SLU7O95391 586 aaKnown RBP18.61■□□□□ 0.57
TRIM27-202ENST00000377199 NTSR2O95665 410 aa18.61■□□□□ 0.57
TRIM27-202ENST00000377199 RILPL1Q5EBL4 403 aa18.61■□□□□ 0.57
TRIM27-202ENST00000377199 SMAP1Q8IYB5 467 aaPredicted RBP18.61■□□□□ 0.57
TRIM27-202ENST00000377199 SMYD4Q8IYR2 804 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms