RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 SURF6O75683 361 aaKnown RBP22.67■■□□□ 1.22
HDAC6-202ENST00000376610 ATP8B2P98198 1209 aa22.67■■□□□ 1.22
HDAC6-202ENST00000376610 HNRNPUQ00839 825 aaKnown RBP eCLIP22.67■■□□□ 1.22
HDAC6-202ENST00000376610 POLA2Q14181 598 aa22.67■■□□□ 1.22
HDAC6-202ENST00000376610 MTFR1Q15390 333 aa22.67■■□□□ 1.22
HDAC6-202ENST00000376610 SLAIN1Q8ND83 568 aa22.67■■□□□ 1.22
HDAC6-202ENST00000376610 SSH3Q8TE77 659 aa22.67■■□□□ 1.22
HDAC6-202ENST00000376610 SNRKQ9NRH2 765 aa22.67■■□□□ 1.22
HDAC6-202ENST00000376610 MAST2Q6P0Q8 1798 aa22.66■■□□□ 1.22
HDAC6-202ENST00000376610 TNPO2O14787 897 aaKnown RBP22.66■■□□□ 1.22
HDAC6-202ENST00000376610 PABPC4Q13310 644 aaKnown RBP eCLIP22.66■■□□□ 1.22
HDAC6-202ENST00000376610 ITPRIPQ8IWB1 547 aa22.66■■□□□ 1.22
HDAC6-202ENST00000376610 PROCA1Q8NCQ7 364 aaPredicted RBP22.66■■□□□ 1.22
HDAC6-202ENST00000376610 DHX36Q9H2U1 1008 aaKnown RBP22.66■■□□□ 1.22
HDAC6-202ENST00000376610 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.66■■□□□ 1.22
HDAC6-202ENST00000376610 HERC5Q9UII4 1024 aaKnown RBP22.66■■□□□ 1.22
HDAC6-202ENST00000376610 ATAD5Q96QE3 1844 aa22.66■■□□□ 1.22
HDAC6-202ENST00000376610 CCL5P13501 91 aa22.65■■□□□ 1.22
HDAC6-202ENST00000376610 HABP4Q5JVS0 413 aaKnown RBP22.65■■□□□ 1.22
HDAC6-202ENST00000376610 CCDC84Q86UT8 332 aaPredicted RBP22.65■■□□□ 1.22
HDAC6-202ENST00000376610 ZNF280CQ8ND82 737 aa22.65■■□□□ 1.22
HDAC6-202ENST00000376610 SH3RF3Q8TEJ3 882 aaPredicted RBP22.65■■□□□ 1.22
HDAC6-202ENST00000376610 DBNDD2Q9BQY9 259 aa22.65■■□□□ 1.22
HDAC6-202ENST00000376610 TRIM34Q9BYJ4 488 aa22.65■■□□□ 1.22
HDAC6-202ENST00000376610 RNF208Q9H0X6 261 aa22.65■■□□□ 1.22
HDAC6-202ENST00000376610 AS3MTQ9HBK9 375 aa22.65■■□□□ 1.22
HDAC6-202ENST00000376610 AATFQ9NY61 560 aaKnown RBP eCLIP22.65■■□□□ 1.22
HDAC6-202ENST00000376610 PI4KBQ9UBF8 816 aa22.65■■□□□ 1.22
HDAC6-202ENST00000376610 IGSF3O75054 1194 aa22.64■■□□□ 1.21
HDAC6-202ENST00000376610 CAP2P40123 477 aa22.64■■□□□ 1.21
HDAC6-202ENST00000376610 SPP2Q13103 211 aa22.64■■□□□ 1.21
HDAC6-202ENST00000376610 C1orf115Q9H7X2 142 aa22.64■■□□□ 1.21
HDAC6-202ENST00000376610 USP17L5A8MUK1 530 aa22.63■■□□□ 1.21
HDAC6-202ENST00000376610 ADCY3O60266 1144 aa22.63■■□□□ 1.21
HDAC6-202ENST00000376610 GJB1P08034 283 aa22.63■■□□□ 1.21
HDAC6-202ENST00000376610 COA7Q96BR5 231 aa22.63■■□□□ 1.21
HDAC6-202ENST00000376610 FLT3LGP49771 235 aa22.62■■□□□ 1.21
HDAC6-202ENST00000376610 TREML2Q5T2D2 321 aa22.62■■□□□ 1.21
HDAC6-202ENST00000376610 ANKRD13CQ8N6S4 541 aa22.62■■□□□ 1.21
HDAC6-202ENST00000376610 ZNF512BQ96KM6 892 aaPredicted RBP22.62■■□□□ 1.21
HDAC6-202ENST00000376610 GABRQQ9UN88 632 aa22.62■■□□□ 1.21
HDAC6-202ENST00000376610 GJA8P48165 433 aa22.61■■□□□ 1.21
HDAC6-202ENST00000376610 GCLCP48506 637 aaPredicted RBP22.61■■□□□ 1.21
HDAC6-202ENST00000376610 HMGCS2P54868 508 aa22.61■■□□□ 1.21
HDAC6-202ENST00000376610 PPP4CP60510 307 aa22.61■■□□□ 1.21
HDAC6-202ENST00000376610 FAM110CQ1W6H9 321 aa22.61■■□□□ 1.21
HDAC6-202ENST00000376610 CRACR2BQ8N4Y2 399 aaPredicted RBP22.61■■□□□ 1.21
HDAC6-202ENST00000376610 TGFBRAP1Q8WUH2 860 aa22.61■■□□□ 1.21
HDAC6-202ENST00000376610 SHISA4Q96DD7 197 aa22.61■■□□□ 1.21
HDAC6-202ENST00000376610 TAOK2Q9UL54 1235 aa22.61■■□□□ 1.21
HDAC6-202ENST00000376610 LOC285556D6RIA3 1793 aa22.61■■□□□ 1.21
HDAC6-202ENST00000376610 CYP2E1P05181 493 aaPredicted RBP22.6■■□□□ 1.21
HDAC6-202ENST00000376610 MAPKAPK5Q8IW41 473 aa22.6■■□□□ 1.21
HDAC6-202ENST00000376610 PXYLP1Q8TE99 480 aa22.6■■□□□ 1.21
HDAC6-202ENST00000376610 DPF3Q92784 378 aa22.6■■□□□ 1.21
HDAC6-202ENST00000376610 NOP58Q9Y2X3 529 aaKnown RBP22.6■■□□□ 1.21
HDAC6-202ENST00000376610 ASNSP08243 561 aa22.59■■□□□ 1.21
HDAC6-202ENST00000376610 IRF5Q13568 498 aa22.59■■□□□ 1.21
HDAC6-202ENST00000376610 FOXP4Q8IVH2 680 aaPredicted RBP22.59■■□□□ 1.21
HDAC6-202ENST00000376610 HTATIP2Q9BUP3 242 aa22.59■■□□□ 1.21
HDAC6-202ENST00000376610 FLT1P17948 1338 aa22.58■■□□□ 1.21
HDAC6-202ENST00000376610 CDK5RAP2Q96SN8 1893 aa22.58■■□□□ 1.21
HDAC6-202ENST00000376610 HLA-DOAP06340 250 aa22.58■■□□□ 1.21
HDAC6-202ENST00000376610 ZAP70P43403 619 aa22.58■■□□□ 1.21
HDAC6-202ENST00000376610 CERS3Q8IU89 383 aa22.58■■□□□ 1.21
HDAC6-202ENST00000376610 U2AF1L4Q8WU68 220 aaKnown RBP22.58■■□□□ 1.21
HDAC6-202ENST00000376610 UNC93B1Q9H1C4 597 aa22.58■■□□□ 1.21
HDAC6-202ENST00000376610 TMOD4Q9NZQ9 345 aa22.58■■□□□ 1.21
HDAC6-202ENST00000376610 DBNLQ9UJU6 430 aaKnown RBP22.58■■□□□ 1.21
HDAC6-202ENST00000376610 FOCADQ5VW36 1801 aa22.58■■□□□ 1.21
HDAC6-202ENST00000376610 MYO5AQ9Y4I1 1855 aaKnown RBP22.58■■□□□ 1.2
HDAC6-202ENST00000376610 DOCK3Q8IZD9 2030 aa22.57■■□□□ 1.2
HDAC6-202ENST00000376610 ZBTB7BO15156 539 aaPredicted RBP22.57■■□□□ 1.2
HDAC6-202ENST00000376610 INHAP05111 366 aa22.57■■□□□ 1.2
HDAC6-202ENST00000376610 ELNP15502 786 aa22.57■■□□□ 1.2
HDAC6-202ENST00000376610 CAPN2P17655 700 aa22.57■■□□□ 1.2
HDAC6-202ENST00000376610 SH3D19Q5HYK7 790 aa22.57■■□□□ 1.2
HDAC6-202ENST00000376610 ERC1Q8IUD2 1116 aa22.57■■□□□ 1.2
HDAC6-202ENST00000376610 CCDC8Q9H0W5 538 aaPredicted RBP22.57■■□□□ 1.2
HDAC6-202ENST00000376610 GINM1Q9NU53 330 aa22.57■■□□□ 1.2
HDAC6-202ENST00000376610 H0YGN5 161 aa22.56■■□□□ 1.2
HDAC6-202ENST00000376610 IDH1O75874 414 aaKnown RBP22.56■■□□□ 1.2
HDAC6-202ENST00000376610 CYP7A1P22680 504 aa22.56■■□□□ 1.2
HDAC6-202ENST00000376610 IRX3P78415 501 aaPredicted RBP22.56■■□□□ 1.2
HDAC6-202ENST00000376610 RRP1BQ14684 758 aaKnown RBP22.56■■□□□ 1.2
HDAC6-202ENST00000376610 ADGRA1Q86SQ6 560 aa22.56■■□□□ 1.2
HDAC6-202ENST00000376610 WDR18Q9BV38 432 aa22.56■■□□□ 1.2
HDAC6-202ENST00000376610 ASCC2Q9H1I8 757 aaPredicted RBP22.56■■□□□ 1.2
HDAC6-202ENST00000376610 PIH1D3Q9NQM4 214 aaKnown RBP22.56■■□□□ 1.2
HDAC6-202ENST00000376610 PALD1Q9ULE6 856 aa22.56■■□□□ 1.2
HDAC6-202ENST00000376610 SIPA1L1O43166 1804 aa22.55■■□□□ 1.2
HDAC6-202ENST00000376610 FARP2O94887 1054 aaPredicted RBP22.55■■□□□ 1.2
HDAC6-202ENST00000376610 SGPL1O95470 568 aa22.55■■□□□ 1.2
HDAC6-202ENST00000376610 RLBP1P12271 317 aa22.55■■□□□ 1.2
HDAC6-202ENST00000376610 BACE1P56817 501 aa22.55■■□□□ 1.2
HDAC6-202ENST00000376610 MTMR2Q13614 643 aa22.55■■□□□ 1.2
HDAC6-202ENST00000376610 COLQQ9Y215 455 aaPredicted RBP22.55■■□□□ 1.2
HDAC6-202ENST00000376610 TRIOBPQ9H2D6 2365 aa22.55■■□□□ 1.2
HDAC6-202ENST00000376610 C19orf81C9J6K1 198 aa22.54■■□□□ 1.2
HDAC6-202ENST00000376610 MIER1Q8N108 512 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms