RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 ANTXR2P58335 489 aa12.37□□□□□ -0.43
PDPN-203ENST00000376061 EXOSC10Q01780 885 aaKnown RBP12.37□□□□□ -0.43
PDPN-203ENST00000376061 NFIAQ12857 509 aa12.37□□□□□ -0.43
PDPN-203ENST00000376061 TRDNQ13061 729 aa12.37□□□□□ -0.43
PDPN-203ENST00000376061 PICALMQ13492 652 aa12.37□□□□□ -0.43
PDPN-203ENST00000376061 TOB2Q14106 344 aaPredicted RBP12.37□□□□□ -0.43
PDPN-203ENST00000376061 SLC4A8Q2Y0W8 1093 aa12.37□□□□□ -0.43
PDPN-203ENST00000376061 MFSD6Q6ZSS7 791 aa12.37□□□□□ -0.43
PDPN-203ENST00000376061 OGFOD1Q8N543 542 aa12.37□□□□□ -0.43
PDPN-203ENST00000376061 ALDH8A1Q9H2A2 487 aaPredicted RBP12.37□□□□□ -0.43
PDPN-203ENST00000376061 RNF41Q9H4P4 317 aaPredicted RBP12.37□□□□□ -0.43
PDPN-203ENST00000376061 CNNM2Q9H8M5 875 aa12.37□□□□□ -0.43
PDPN-203ENST00000376061 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
PDPN-203ENST00000376061 COL2A1P02458 1487 aaPredicted RBP12.37□□□□□ -0.43
PDPN-203ENST00000376061 PRC1O43663 620 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 PCP11498 1178 aaKnown RBP12.36□□□□□ -0.43
PDPN-203ENST00000376061 MCM5P33992 734 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 CACNB3P54284 484 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 ZNF280AP59817 542 aaPredicted RBP12.36□□□□□ -0.43
PDPN-203ENST00000376061 DLGAP5Q15398 846 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 Q6ZUG5 572 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 CYB5R4Q7L1T6 521 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 CHST3Q7LGC8 479 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 AMOTL1Q8IY63 956 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 STK11IPQ8N1F8 1099 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 MTMR14Q8NCE2 650 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 ZBED3Q96IU2 234 aaPredicted RBP12.36□□□□□ -0.43
PDPN-203ENST00000376061 TMX3Q96JJ7 454 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 PRMT6Q96LA8 375 aaPredicted RBP12.36□□□□□ -0.43
PDPN-203ENST00000376061 IDI2Q9BXS1 227 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 LRRC2Q9BYS8 371 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 KRT23Q9C075 422 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 OSBPL5Q9H0X9 879 aaPredicted RBP12.36□□□□□ -0.43
PDPN-203ENST00000376061 TDRD3Q9H7E2 651 aaKnown RBP12.36□□□□□ -0.43
PDPN-203ENST00000376061 RNF181Q9P0P0 153 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 GJA3Q9Y6H8 435 aa12.36□□□□□ -0.43
PDPN-203ENST00000376061 ORC4O43929 436 aa12.35□□□□□ -0.43
PDPN-203ENST00000376061 LARGE1O95461 756 aa12.35□□□□□ -0.43
PDPN-203ENST00000376061 POLR3DP05423 398 aaPredicted RBP12.35□□□□□ -0.43
PDPN-203ENST00000376061 SLC3A2P08195 630 aaKnown RBP12.35□□□□□ -0.43
PDPN-203ENST00000376061 FGRP09769 529 aa12.35□□□□□ -0.43
PDPN-203ENST00000376061 ANKRD1Q15327 319 aa12.35□□□□□ -0.43
PDPN-203ENST00000376061 RRP12Q5JTH9 1297 aaKnown RBP12.35□□□□□ -0.43
PDPN-203ENST00000376061 DPF2Q92785 391 aa12.35□□□□□ -0.43
PDPN-203ENST00000376061 LARP6Q9BRS8 491 aaKnown RBP12.35□□□□□ -0.43
PDPN-203ENST00000376061 AGXT2Q9BYV1 514 aa12.35□□□□□ -0.43
PDPN-203ENST00000376061 FAM198AQ9UFP1 575 aa12.35□□□□□ -0.43
PDPN-203ENST00000376061 LIMCH1Q9UPQ0 1083 aa12.35□□□□□ -0.43
PDPN-203ENST00000376061 GREB1LQ9C091 1923 aaPredicted RBP12.34□□□□□ -0.43
PDPN-203ENST00000376061 KDM4AO75164 1064 aa12.34□□□□□ -0.43
PDPN-203ENST00000376061 MMP14P50281 582 aa12.34□□□□□ -0.43
PDPN-203ENST00000376061 PLCD1P51178 756 aa12.34□□□□□ -0.43
PDPN-203ENST00000376061 GPR162Q16538 588 aa12.34□□□□□ -0.43
PDPN-203ENST00000376061 C9orf131Q5VYM1 1079 aa12.34□□□□□ -0.43
PDPN-203ENST00000376061 MICALL2Q8IY33 904 aa12.34□□□□□ -0.43
PDPN-203ENST00000376061 GPC2Q8N158 579 aa12.34□□□□□ -0.43
PDPN-203ENST00000376061 FBXL16Q8N461 479 aa12.34□□□□□ -0.43
PDPN-203ENST00000376061 DYNLL2Q96FJ2 89 aa12.34□□□□□ -0.43
PDPN-203ENST00000376061 MYOZ2Q9NPC6 264 aa12.34□□□□□ -0.43
PDPN-203ENST00000376061 GPHNQ9NQX3 736 aaPredicted RBP12.34□□□□□ -0.43
PDPN-203ENST00000376061 TOMM22Q9NS69 142 aa12.34□□□□□ -0.43
PDPN-203ENST00000376061 TPCN1Q9ULQ1 816 aa12.34□□□□□ -0.43
PDPN-203ENST00000376061 ATRNL1Q5VV63 1379 aa12.34□□□□□ -0.43
PDPN-203ENST00000376061 CLRN2A0PK11 232 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 PRDM1O75626 825 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 EGFRP00533 1210 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 FGD1P98174 961 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 CUL4AQ13619 759 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 C16orf86Q6ZW13 317 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 ZFPM1Q8IX07 1006 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 SLC44A5Q8NCS7 719 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 ESR2Q92731 530 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 BRF1Q92994 677 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 OTUD5Q96G74 571 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 TMOD2Q9NZR1 351 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 ZSWIM5Q9P217 1185 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 ZNF70Q9UC06 446 aaPredicted RBP12.33□□□□□ -0.44
PDPN-203ENST00000376061 CNTNAP1P78357 1384 aa12.33□□□□□ -0.44
PDPN-203ENST00000376061 SH2B2O14492 632 aaPredicted RBP12.32□□□□□ -0.44
PDPN-203ENST00000376061 ENTPD3O75355 529 aa12.32□□□□□ -0.44
PDPN-203ENST00000376061 PDE4BQ07343 736 aa12.32□□□□□ -0.44
PDPN-203ENST00000376061 TCP10Q12799 353 aa12.32□□□□□ -0.44
PDPN-203ENST00000376061 SPRYD3Q8NCJ5 442 aa12.32□□□□□ -0.44
PDPN-203ENST00000376061 TMEM87BQ96K49 555 aa12.32□□□□□ -0.44
PDPN-203ENST00000376061 SH2B1Q9NRF2 756 aaPredicted RBP12.32□□□□□ -0.44
PDPN-203ENST00000376061 GPRC5DQ9NZD1 345 aa12.32□□□□□ -0.44
PDPN-203ENST00000376061 CNOT7Q9UIV1 285 aaKnown RBP12.32□□□□□ -0.44
PDPN-203ENST00000376061 WNT10BO00744 389 aa12.31□□□□□ -0.44
PDPN-203ENST00000376061 RANBP6O60518 1105 aaKnown RBP12.31□□□□□ -0.44
PDPN-203ENST00000376061 GABPAQ06546 454 aa12.31□□□□□ -0.44
PDPN-203ENST00000376061 APOBRQ0VD83 1088 aa12.31□□□□□ -0.44
PDPN-203ENST00000376061 ST3GAL1Q11201 340 aa12.31□□□□□ -0.44
PDPN-203ENST00000376061 ME3Q16798 604 aa12.31□□□□□ -0.44
PDPN-203ENST00000376061 NBPF9Q3BBW0 867 aa12.31□□□□□ -0.44
PDPN-203ENST00000376061 TMEM67Q5HYA8 995 aa12.31□□□□□ -0.44
PDPN-203ENST00000376061 FKBP1CQ5VVH2 108 aa12.31□□□□□ -0.44
PDPN-203ENST00000376061 SH3BP5LQ7L8J4 393 aa12.31□□□□□ -0.44
PDPN-203ENST00000376061 TTC6Q86TZ1 520 aa12.31□□□□□ -0.44
PDPN-203ENST00000376061 ZSCAN31Q96LW9 406 aaPredicted RBP12.31□□□□□ -0.44
PDPN-203ENST00000376061 EHD4Q9H223 541 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms