RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 TFRCP02786 760 aaKnown RBP14.97□□□□□ -0.01
LSM2-208ENST00000375661 FAM110CQ1W6H9 321 aa14.97□□□□□ -0.01
LSM2-208ENST00000375661 CCDC102BQ68D86 513 aa14.97□□□□□ -0.01
LSM2-208ENST00000375661 SH3BP5LQ7L8J4 393 aa14.97□□□□□ -0.01
LSM2-208ENST00000375661 PROCA1Q8NCQ7 364 aaPredicted RBP14.97□□□□□ -0.01
LSM2-208ENST00000375661 CRBNQ96SW2 442 aa14.97□□□□□ -0.01
LSM2-208ENST00000375661 SIL1Q9H173 461 aa14.97□□□□□ -0.01
LSM2-208ENST00000375661 COL2A1P02458 1487 aaPredicted RBP14.96□□□□□ -0.01
LSM2-208ENST00000375661 DDTLA6NHG4 134 aaPredicted RBP14.96□□□□□ -0.01
LSM2-208ENST00000375661 ELNP15502 786 aa14.96□□□□□ -0.01
LSM2-208ENST00000375661 MTX1Q13505 466 aa14.96□□□□□ -0.01
LSM2-208ENST00000375661 ANKLE1Q8NAG6 615 aa14.96□□□□□ -0.01
LSM2-208ENST00000375661 DEFB118Q96PH6 123 aa14.96□□□□□ -0.01
LSM2-208ENST00000375661 OSBPL5Q9H0X9 879 aaPredicted RBP14.96□□□□□ -0.01
LSM2-208ENST00000375661 COPRSQ9NQ92 184 aa14.96□□□□□ -0.01
LSM2-208ENST00000375661 MROH7-TTC4A0A0A0MT08 1334 aa14.95□□□□□ -0.02
LSM2-208ENST00000375661 TRIM75PA6NK02 468 aa14.95□□□□□ -0.02
LSM2-208ENST00000375661 BTDP43251 543 aa14.95□□□□□ -0.02
LSM2-208ENST00000375661 GCLCP48506 637 aaPredicted RBP14.95□□□□□ -0.02
LSM2-208ENST00000375661 DDX4Q9NQI0 724 aaKnown RBP14.95□□□□□ -0.02
LSM2-208ENST00000375661 ABCF2Q9UG63 623 aa14.95□□□□□ -0.02
LSM2-208ENST00000375661 GPR75-ASB3A0A0A6YYF3 556 aa14.94□□□□□ -0.02
LSM2-208ENST00000375661 ATP8B2P98198 1209 aa14.94□□□□□ -0.02
LSM2-208ENST00000375661 PABPC4Q13310 644 aaKnown RBP eCLIP14.94□□□□□ -0.022e-7■■■■□ 25.3
LSM2-208ENST00000375661 RASGRF1Q13972 1273 aa14.94□□□□□ -0.02
LSM2-208ENST00000375661 ERICH6Q7L0X2 663 aa14.94□□□□□ -0.02
LSM2-208ENST00000375661 NECAB2Q7Z6G3 386 aa14.94□□□□□ -0.02
LSM2-208ENST00000375661 ANKRD13CQ8N6S4 541 aa14.94□□□□□ -0.02
LSM2-208ENST00000375661 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.94□□□□□ -0.02
LSM2-208ENST00000375661 AKAP2Q9Y2D5 859 aa14.94□□□□□ -0.02
LSM2-208ENST00000375661 SZT2Q5T011 3432 aa14.94□□□□□ -0.02
LSM2-208ENST00000375661 PLXNB2O15031 1838 aa14.94□□□□□ -0.02
LSM2-208ENST00000375661 DDX60LQ5H9U9 1706 aaKnown RBP14.93□□□□□ -0.02
LSM2-208ENST00000375661 PNMA6EA0A0J9YXQ4 647 aa14.93□□□□□ -0.02
LSM2-208ENST00000375661 LDHCP07864 332 aa14.93□□□□□ -0.02
LSM2-208ENST00000375661 ADORA1P30542 326 aa14.93□□□□□ -0.02
LSM2-208ENST00000375661 BMP8BP34820 402 aa14.93□□□□□ -0.02
LSM2-208ENST00000375661 RHBDL3P58872 404 aa14.93□□□□□ -0.02
LSM2-208ENST00000375661 PICALMQ13492 652 aa14.93□□□□□ -0.02
LSM2-208ENST00000375661 GPR153Q6NV75 609 aa14.93□□□□□ -0.02
LSM2-208ENST00000375661 CEP85Q6P2H3 762 aa14.93□□□□□ -0.02
LSM2-208ENST00000375661 CHMP4BQ9H444 224 aaKnown RBP14.93□□□□□ -0.02
LSM2-208ENST00000375661 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.93□□□□□ -0.02
LSM2-208ENST00000375661 SRGAP3O43295 1099 aa14.92□□□□□ -0.02
LSM2-208ENST00000375661 HMGCRP04035 888 aa14.92□□□□□ -0.02
LSM2-208ENST00000375661 CENPBP07199 599 aaPredicted RBP14.92□□□□□ -0.02
LSM2-208ENST00000375661 GSTO1P78417 241 aa14.92□□□□□ -0.02
LSM2-208ENST00000375661 POLA2Q14181 598 aa14.92□□□□□ -0.02
LSM2-208ENST00000375661 TREML2Q5T2D2 321 aa14.92□□□□□ -0.02
LSM2-208ENST00000375661 ZNF280CQ8ND82 737 aa14.92□□□□□ -0.02
LSM2-208ENST00000375661 PAWRQ96IZ0 340 aaKnown RBP14.92□□□□□ -0.02
LSM2-208ENST00000375661 PA2G4Q9UQ80 394 aaKnown RBP14.92□□□□□ -0.02
LSM2-208ENST00000375661 FOCADQ5VW36 1801 aa14.92□□□□□ -0.02
LSM2-208ENST00000375661 CDK5RAP2Q96SN8 1893 aa14.91□□□□□ -0.02
LSM2-208ENST00000375661 A0A1B0GUL7 405 aa14.91□□□□□ -0.02
LSM2-208ENST00000375661 TIMM10P62072 90 aa14.91□□□□□ -0.02
LSM2-208ENST00000375661 IRX6P78412 446 aaPredicted RBP14.91□□□□□ -0.02
LSM2-208ENST00000375661 MECOMQ03112 1051 aa14.91□□□□□ -0.02
LSM2-208ENST00000375661 SPP2Q13103 211 aa14.91□□□□□ -0.02
LSM2-208ENST00000375661 SH3D19Q5HYK7 790 aa14.91□□□□□ -0.02
LSM2-208ENST00000375661 SLC17A8Q8NDX2 589 aa14.91□□□□□ -0.02
LSM2-208ENST00000375661 EXOC6Q8TAG9 804 aa14.91□□□□□ -0.02
LSM2-208ENST00000375661 SSH3Q8TE77 659 aa14.91□□□□□ -0.02
LSM2-208ENST00000375661 XAGE2Q96GT9 111 aa14.91□□□□□ -0.02
LSM2-208ENST00000375661 AS3MTQ9HBK9 375 aa14.91□□□□□ -0.02
LSM2-208ENST00000375661 TAOK2Q9UL54 1235 aa14.91□□□□□ -0.02
LSM2-208ENST00000375661 RPTORQ8N122 1335 aa14.91□□□□□ -0.02
LSM2-208ENST00000375661 RANBP2P49792 3224 aaKnown RBP14.9□□□□□ -0.02
LSM2-208ENST00000375661 USP17L5A8MUK1 530 aa14.9□□□□□ -0.02
LSM2-208ENST00000375661 CAP2P40123 477 aa14.9□□□□□ -0.02
LSM2-208ENST00000375661 SIRT2Q8IXJ6 389 aa14.9□□□□□ -0.02
LSM2-208ENST00000375661 GDF15Q99988 308 aa14.9□□□□□ -0.02
LSM2-208ENST00000375661 HMX1Q9NP08 348 aaPredicted RBP14.9□□□□□ -0.02
LSM2-208ENST00000375661 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.9□□□□□ -0.02
LSM2-208ENST00000375661 MORF4L1Q9UBU8 362 aa14.9□□□□□ -0.02
LSM2-208ENST00000375661 STAP2Q9UGK3 403 aa14.9□□□□□ -0.02
LSM2-208ENST00000375661 HERC5Q9UII4 1024 aaKnown RBP14.9□□□□□ -0.02
LSM2-208ENST00000375661 GJD2Q9UKL4 321 aa14.9□□□□□ -0.02
LSM2-208ENST00000375661 MAST2Q6P0Q8 1798 aa14.9□□□□□ -0.02
LSM2-208ENST00000375661 SIPA1L1O43166 1804 aa14.89□□□□□ -0.03
LSM2-208ENST00000375661 SLURP2P0DP57 97 aa14.89□□□□□ -0.03
LSM2-208ENST00000375661 CCDC84Q86UT8 332 aaPredicted RBP14.89□□□□□ -0.03
LSM2-208ENST00000375661 RPAP2Q8IXW5 612 aaPredicted RBP14.89□□□□□ -0.03
LSM2-208ENST00000375661 ZNF384Q8TF68 577 aa14.89□□□□□ -0.03
LSM2-208ENST00000375661 NSUN4Q96CB9 384 aaKnown RBP14.89□□□□□ -0.03
LSM2-208ENST00000375661 NBPF3Q9H094 633 aa14.89□□□□□ -0.03
LSM2-208ENST00000375661 DLL1O00548 723 aa14.88□□□□□ -0.03
LSM2-208ENST00000375661 SOX1O00570 391 aaPredicted RBP14.88□□□□□ -0.03
LSM2-208ENST00000375661 HMGCS2P54868 508 aa14.88□□□□□ -0.03
LSM2-208ENST00000375661 SPATA5Q8NB90 893 aa14.88□□□□□ -0.03
LSM2-208ENST00000375661 DIS3LQ8TF46 1054 aaKnown RBP14.88□□□□□ -0.03
LSM2-208ENST00000375661 LRCH3Q96II8 777 aa14.88□□□□□ -0.03
LSM2-208ENST00000375661 WDR18Q9BV38 432 aa14.88□□□□□ -0.03
LSM2-208ENST00000375661 ASCC2Q9H1I8 757 aaPredicted RBP14.88□□□□□ -0.03
LSM2-208ENST00000375661 HMG20BQ9P0W2 317 aa14.88□□□□□ -0.03
LSM2-208ENST00000375661 PCDHB15Q9Y5E8 787 aa14.88□□□□□ -0.03
LSM2-208ENST00000375661 XRCC5P13010 732 aaKnown RBP14.87□□□□□ -0.03
LSM2-208ENST00000375661 ARID4AP29374 1257 aaPredicted RBP14.87□□□□□ -0.03
LSM2-208ENST00000375661 HOXA7P31268 230 aaPredicted RBP14.87□□□□□ -0.03
LSM2-208ENST00000375661 TFCP2Q12800 502 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms