RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 ITGB4P16144 1822 aa5.29□□□□□ -1.56
PCDH11X-204ENST00000373088 PNPLA7Q6ZV29 1317 aa5.29□□□□□ -1.56
PCDH11X-204ENST00000373088 USP17L3A6NCW0 530 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 USP17L4A6NCW7 530 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 FOXP2O15409 715 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 XRCC6P12956 609 aaKnown RBP eCLIP5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 AOC3Q16853 763 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 CCDC183Q5T5S1 534 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 KRT40Q6A162 431 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 USP17L1Q7RTZ2 530 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 TMC4Q7Z404 712 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 TTC6Q86TZ1 520 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 OGFOD1Q8N543 542 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 FSIP1Q8NA03 581 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 TEKT1Q969V4 418 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 RIOK1Q9BRS2 568 aaKnown RBP5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 BCS1LQ9Y276 419 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 RGL2O15211 777 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 MARCH6O60337 910 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 CDC27P30260 824 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 EVX2Q03828 476 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 CCDC96Q2M329 555 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 CCAR1Q8IX12 1150 aaKnown RBP5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 LEO1Q8WVC0 666 aaPredicted RBP5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 STAG1Q8WVM7 1258 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 USP28Q96RU2 1077 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 LY9Q9HBG7 655 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 VIRMAQ69YN4 1812 aaKnown RBP5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 PSDA5PKW4 1024 aaPredicted RBP5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 GOLGA8HP0CJ92 632 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 KIF5BP33176 963 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 GAS2L3Q86XJ1 694 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 TTLL6Q8N841 843 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 VPS54Q9P1Q0 977 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 ZMYM6O95789 1325 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 BECN2A8MW95 431 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 UBE2Q2LH0YL09 131 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 CTDNEP1O95476 244 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 MAP3K11Q16584 847 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 FBXO18Q8NFZ0 1043 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 IGDCC4Q8TDY8 1250 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 JDP2Q8WYK2 163 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 AKT1S1Q96B36 256 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 ALDH8A1Q9H2A2 487 aaPredicted RBP5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 KCNQ5Q9NR82 932 aa5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 ZNF277Q9NRM2 450 aaPredicted RBP5.28□□□□□ -1.56
PCDH11X-204ENST00000373088 MYH14Q7Z406 1995 aaKnown RBP5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 FAM196BA6NMK8 535 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 HOXA10P31260 410 aaPredicted RBP5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 PLCD1P51178 756 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 R3HDM1Q15032 1099 aaKnown RBP5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 CRY2Q49AN0 593 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 SOGA3Q5TF21 947 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 HEATR3Q7Z4Q2 680 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 DIS3L2Q8IYB7 885 aaKnown RBP5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 ENAHQ8N8S7 591 aaPredicted RBP5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 NBPF3Q9H094 633 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 A0A1B0GVL5 298 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 CLRN2A0PK11 232 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 BTBD18B2RXH4 712 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 ECE2O60344 883 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 LIG1P18858 919 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 LIFRP42702 1097 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 ISM2Q6H9L7 571 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 CREBRFQ8IUR6 639 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 PDILTQ8N807 584 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 JMYQ8N9B5 988 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 PNMA1Q8ND90 353 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 NKX2-3Q8TAU0 364 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 CABP5Q9NP86 173 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 GJA3Q9Y6H8 435 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 MROH7-TTC4A0A0A0MT08 1334 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 LAMB4A4D0S4 1761 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 GOLGA6L19H0YKK7 550 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 TULP1O00294 542 aaPredicted RBP5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 BIN1O00499 593 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 SPTLC2O15270 562 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 LETM1O95202 739 aaPredicted RBP5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 CCDC192P0DO97 292 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 CALM1P0DP23 149 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 CALM2P0DP24 149 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 CALM3P0DP25 149 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 FBXO41Q8TF61 875 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 ERCC4Q92889 916 aaPredicted RBP5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 CPVLQ9H3G5 476 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 GPCPD1Q9NPB8 672 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 SEC63Q9UGP8 760 aaKnown RBP5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 HPS5Q9UPZ3 1129 aa5.27□□□□□ -1.57
PCDH11X-204ENST00000373088 TCP10L2B9ZVM9 353 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 PLEKHA8P1O95397 391 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 DEXIO95424 95 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 DPEP1P16444 411 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 RESTQ13127 1097 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 SPECC1Q5M775 1068 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 LRSAM1Q6UWE0 723 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 PODNQ7Z5L7 613 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 LRRC47Q8N1G4 583 aaKnown RBP5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 SMARCC2Q8TAQ2 1214 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 ZNF384Q8TF68 577 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 CLIP2Q9UDT6 1046 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms