RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 RASEFQ8IZ41 740 aa20.93■□□□□ 0.94
VPS37B-202ENST00000371248 DYNLL2Q96FJ2 89 aa20.93■□□□□ 0.94
VPS37B-202ENST00000371248 NBPF3Q9H094 633 aa20.93■□□□□ 0.94
VPS37B-202ENST00000371248 ADM5C9JUS6 153 aa20.92■□□□□ 0.94
VPS37B-202ENST00000371248 ZKSCAN1P17029 563 aaPredicted RBP20.92■□□□□ 0.94
VPS37B-202ENST00000371248 MAP1SQ66K74 1059 aaPredicted RBP20.92■□□□□ 0.94
VPS37B-202ENST00000371248 USP48Q86UV5 1035 aa20.92■□□□□ 0.94
VPS37B-202ENST00000371248 LDHDQ86WU2 507 aa20.92■□□□□ 0.94
VPS37B-202ENST00000371248 PPP2R3BQ9Y5P8 575 aa20.92■□□□□ 0.94
VPS37B-202ENST00000371248 DLK2Q6UY11 383 aa20.92■□□□□ 0.94
VPS37B-202ENST00000371248 SERPINB13Q9UIV8 391 aa20.92■□□□□ 0.94
VPS37B-202ENST00000371248 MYH8P13535 1937 aa20.91■□□□□ 0.94
VPS37B-202ENST00000371248 SLC3A2P08195 630 aaKnown RBP20.91■□□□□ 0.94
VPS37B-202ENST00000371248 SLURP2P0DP57 97 aa20.91■□□□□ 0.94
VPS37B-202ENST00000371248 CDC37L1Q7L3B6 337 aa20.91■□□□□ 0.94
VPS37B-202ENST00000371248 TBC1D10CQ8IV04 446 aa20.91■□□□□ 0.94
VPS37B-202ENST00000371248 KCNB2Q92953 911 aa20.91■□□□□ 0.94
VPS37B-202ENST00000371248 GLIS2Q9BZE0 524 aaPredicted RBP20.91■□□□□ 0.94
VPS37B-202ENST00000371248 INCENPQ9NQS7 918 aa20.91■□□□□ 0.94
VPS37B-202ENST00000371248 SNX14Q9Y5W7 946 aa20.91■□□□□ 0.94
VPS37B-202ENST00000371248 NBPF12Q5TAG4 269 aaPredicted RBP20.9■□□□□ 0.94
VPS37B-202ENST00000371248 FOXP4Q8IVH2 680 aaPredicted RBP20.9■□□□□ 0.94
VPS37B-202ENST00000371248 CRACR2BQ8N4Y2 399 aaPredicted RBP20.9■□□□□ 0.94
VPS37B-202ENST00000371248 TACC3Q9Y6A5 838 aa20.9■□□□□ 0.94
VPS37B-202ENST00000371248 AKNAD1Q5T1N1 836 aa20.9■□□□□ 0.94
VPS37B-202ENST00000371248 MFSD6Q6ZSS7 791 aa20.9■□□□□ 0.94
VPS37B-202ENST00000371248 EHD4Q9H223 541 aa20.9■□□□□ 0.94
VPS37B-202ENST00000371248 ROBO3Q96MS0 1386 aa20.89■□□□□ 0.94
VPS37B-202ENST00000371248 E7EWF7 191 aa20.89■□□□□ 0.93
VPS37B-202ENST00000371248 RBM25P49756 843 aaKnown RBP20.89■□□□□ 0.93
VPS37B-202ENST00000371248 TSGA10IPQ3SY00 556 aa20.89■□□□□ 0.93
VPS37B-202ENST00000371248 TBC1D32Q96NH3 1257 aa20.89■□□□□ 0.93
VPS37B-202ENST00000371248 TRIM34Q9BYJ4 488 aa20.89■□□□□ 0.93
VPS37B-202ENST00000371248 FAM196BA6NMK8 535 aa20.89■□□□□ 0.93
VPS37B-202ENST00000371248 GABPAQ06546 454 aa20.89■□□□□ 0.93
VPS37B-202ENST00000371248 PDE4BQ07343 736 aa20.89■□□□□ 0.93
VPS37B-202ENST00000371248 STOX1Q6ZVD7 989 aa20.89■□□□□ 0.93
VPS37B-202ENST00000371248 C16orf86Q6ZW13 317 aa20.89■□□□□ 0.93
VPS37B-202ENST00000371248 MIGA2Q7L4E1 593 aa20.89■□□□□ 0.93
VPS37B-202ENST00000371248 SLC44A5Q8NCS7 719 aa20.89■□□□□ 0.93
VPS37B-202ENST00000371248 STAG1Q8WVM7 1258 aa20.89■□□□□ 0.93
VPS37B-202ENST00000371248 PRDM1O75626 825 aa20.88■□□□□ 0.93
VPS37B-202ENST00000371248 CDK8P49336 464 aa20.88■□□□□ 0.93
VPS37B-202ENST00000371248 RNF41Q9H4P4 317 aaPredicted RBP20.88■□□□□ 0.93
VPS37B-202ENST00000371248 TOMM22Q9NS69 142 aa20.88■□□□□ 0.93
VPS37B-202ENST00000371248 KIF3CO14782 793 aa20.87■□□□□ 0.93
VPS37B-202ENST00000371248 ANAPC15P60006 121 aa20.87■□□□□ 0.93
VPS37B-202ENST00000371248 ADCK5Q3MIX3 580 aa20.87■□□□□ 0.93
VPS37B-202ENST00000371248 METTL16Q86W50 562 aaKnown RBP20.87■□□□□ 0.93
VPS37B-202ENST00000371248 DNAJC18Q9H819 358 aa20.87■□□□□ 0.93
VPS37B-202ENST00000371248 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.87■□□□□ 0.934e-8■■■■■ 51.6
VPS37B-202ENST00000371248 MKNK2Q9HBH9 465 aa20.87■□□□□ 0.93
VPS37B-202ENST00000371248 HERC5Q9UII4 1024 aaKnown RBP20.87■□□□□ 0.93
VPS37B-202ENST00000371248 KRT32Q14532 448 aa20.87■□□□□ 0.93
VPS37B-202ENST00000371248 SUPT20HL1Q3ZLR7 823 aa20.87■□□□□ 0.93
VPS37B-202ENST00000371248 RRP12Q5JTH9 1297 aaKnown RBP20.87■□□□□ 0.93
VPS37B-202ENST00000371248 CDCA5Q96FF9 252 aa20.87■□□□□ 0.93
VPS37B-202ENST00000371248 SWAP70Q9UH65 585 aa20.87■□□□□ 0.93
VPS37B-202ENST00000371248 NEDD4P46934 1319 aa20.87■□□□□ 0.93
VPS37B-202ENST00000371248 FGRP09769 529 aa20.86■□□□□ 0.93
VPS37B-202ENST00000371248 TRDNQ13061 729 aa20.86■□□□□ 0.93
VPS37B-202ENST00000371248 CHADLQ6NUI6 762 aa20.86■□□□□ 0.93
VPS37B-202ENST00000371248 ZNF287Q9HBT7 754 aa20.86■□□□□ 0.93
VPS37B-202ENST00000371248 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.86■□□□□ 0.93
VPS37B-202ENST00000371248 TBC1D12O60347 775 aa20.85■□□□□ 0.93
VPS37B-202ENST00000371248 ZNF784Q8NCA9 323 aaPredicted RBP20.85■□□□□ 0.93
VPS37B-202ENST00000371248 HOOK2Q96ED9 719 aa20.85■□□□□ 0.93
VPS37B-202ENST00000371248 PCP11498 1178 aaKnown RBP20.85■□□□□ 0.93
VPS37B-202ENST00000371248 SHMT1P34896 483 aa20.85■□□□□ 0.93
VPS37B-202ENST00000371248 NCOA7Q8NI08 942 aa20.85■□□□□ 0.93
VPS37B-202ENST00000371248 JAKMIP1Q96N16 626 aaKnown RBP20.85■□□□□ 0.93
VPS37B-202ENST00000371248 NEK1Q96PY6 1258 aa20.85■□□□□ 0.93
VPS37B-202ENST00000371248 CNNM2Q9H8M5 875 aa20.85■□□□□ 0.93
VPS37B-202ENST00000371248 TRAF5O00463 557 aa20.84■□□□□ 0.93
VPS37B-202ENST00000371248 MAP3K10Q02779 954 aa20.84■□□□□ 0.93
VPS37B-202ENST00000371248 KRT23Q9C075 422 aa20.84■□□□□ 0.93
VPS37B-202ENST00000371248 B4E1Z4 1266 aa20.84■□□□□ 0.93
VPS37B-202ENST00000371248 ORC4O43929 436 aa20.84■□□□□ 0.93
VPS37B-202ENST00000371248 RANBP6O60518 1105 aaKnown RBP20.84■□□□□ 0.93
VPS37B-202ENST00000371248 FMR1Q06787 632 aaKnown RBP eCLIP20.84■□□□□ 0.93
VPS37B-202ENST00000371248 DCAF15Q66K64 600 aa20.84■□□□□ 0.93
VPS37B-202ENST00000371248 RALYLQ86SE5 291 aaKnown RBP20.84■□□□□ 0.93
VPS37B-202ENST00000371248 ZNF444Q8N0Y2 327 aaPredicted RBP20.84■□□□□ 0.93
VPS37B-202ENST00000371248 NKX2-3Q8TAU0 364 aa20.84■□□□□ 0.93
VPS37B-202ENST00000371248 TAOK2Q9UL54 1235 aa20.84■□□□□ 0.93
VPS37B-202ENST00000371248 FZD1Q9UP38 647 aa20.84■□□□□ 0.93
VPS37B-202ENST00000371248 SSC5DA1L4H1 1573 aa20.83■□□□□ 0.93
VPS37B-202ENST00000371248 RASA1P20936 1047 aa20.83■□□□□ 0.93
VPS37B-202ENST00000371248 PRKG1Q13976 671 aa20.83■□□□□ 0.93
VPS37B-202ENST00000371248 TATDN1Q6P1N9 297 aa20.83■□□□□ 0.93
VPS37B-202ENST00000371248 KIF2CQ99661 725 aa20.83■□□□□ 0.93
VPS37B-202ENST00000371248 KDM4AO75164 1064 aa20.82■□□□□ 0.92
VPS37B-202ENST00000371248 PSMA5P28066 241 aa20.82■□□□□ 0.92
VPS37B-202ENST00000371248 NF2P35240 595 aa20.82■□□□□ 0.92
VPS37B-202ENST00000371248 COL9A3Q14050 684 aaPredicted RBP20.82■□□□□ 0.92
VPS37B-202ENST00000371248 CASTP20810 708 aaKnown RBP20.82■□□□□ 0.92
VPS37B-202ENST00000371248 CERKLQ49MI3 558 aaPredicted RBP20.82■□□□□ 0.92
VPS37B-202ENST00000371248 FAM47AQ5JRC9 791 aa20.82■□□□□ 0.92
VPS37B-202ENST00000371248 ESR2Q92731 530 aa20.82■□□□□ 0.92
VPS37B-202ENST00000371248 IL17RAQ96F46 866 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms