RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 FANCBQ8NB91 859 aa13.26□□□□□ -0.29
RAB39B-201ENST00000369454 AATFQ9NY61 560 aaKnown RBP eCLIP13.26□□□□□ -0.29
RAB39B-201ENST00000369454 PCDHA5Q9Y5H7 936 aa13.26□□□□□ -0.29
RAB39B-201ENST00000369454 MYH3P11055 1940 aa13.26□□□□□ -0.29
RAB39B-201ENST00000369454 TOB1P50616 345 aaPredicted RBP13.25□□□□□ -0.29
RAB39B-201ENST00000369454 ALX1Q15699 326 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 CFAP100Q494V2 611 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 CAVIN4Q5BKX8 364 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 FOXP4Q8IVH2 680 aaPredicted RBP13.25□□□□□ -0.29
RAB39B-201ENST00000369454 LINC00116Q8NCU8 138 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 PRDM10Q9NQV6 1147 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 ATRNO75882 1429 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 MMP1P03956 469 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 IFNAR1P17181 557 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 TPM4P67936 248 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 FAM47AQ5JRC9 791 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 STAG1Q8WVM7 1258 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 DPF2Q92785 391 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 ZNF652Q9Y2D9 606 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 MYH15Q9Y2K3 1946 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 U2AF2P26368 475 aaKnown RBP eCLIP13.25□□□□□ -0.29
RAB39B-201ENST00000369454 CDC25BP30305 580 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 TBC1D9BQ66K14 1250 aa13.25□□□□□ -0.29
RAB39B-201ENST00000369454 METTL16Q86W50 562 aaKnown RBP13.25□□□□□ -0.29
RAB39B-201ENST00000369454 TRMT44Q8IYL2 757 aaKnown RBP13.25□□□□□ -0.29
RAB39B-201ENST00000369454 GNL3LQ9NVN8 582 aaKnown RBP13.25□□□□□ -0.29
RAB39B-201ENST00000369454 USP17L12C9JPN9 530 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 USP17L21D6R901 530 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 PLEKHA8P1O95397 391 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 CCZ1BP86790 482 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 CCZ1P86791 482 aaPredicted RBP13.24□□□□□ -0.29
RAB39B-201ENST00000369454 FANCCQ00597 558 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 PTPN14Q15678 1187 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 CRACR2BQ8N4Y2 399 aaPredicted RBP13.24□□□□□ -0.29
RAB39B-201ENST00000369454 KRI1Q8N9T8 703 aaKnown RBP13.24□□□□□ -0.29
RAB39B-201ENST00000369454 CCDC112Q8NEF3 446 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 MINPP1Q9UNW1 487 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 V9GY48 417 aaPredicted RBP13.24□□□□□ -0.29
RAB39B-201ENST00000369454 GNAT2P19087 354 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 CASP1P29466 404 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 NCAPHQ15003 741 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 ESR2Q92731 530 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 COL4A1P02462 1669 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 TAF1P21675 1872 aa13.24□□□□□ -0.29
RAB39B-201ENST00000369454 NOM1Q5C9Z4 860 aaKnown RBP13.23□□□□□ -0.29
RAB39B-201ENST00000369454 PPP4R3BQ5MIZ7 849 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 C8orf37Q96NL8 207 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 FANCLQ9NW38 375 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 SERTAD1Q9UHV2 236 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 PRR29P0C7W0 189 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 SFPQP23246 707 aaKnown RBP eCLIP13.23□□□□□ -0.29
RAB39B-201ENST00000369454 CBX1P83916 185 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 IFIT1BQ5T764 474 aaKnown RBP13.23□□□□□ -0.29
RAB39B-201ENST00000369454 RESP18Q5W5W9 173 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 STAMQ92783 540 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 FAM84BQ96KN1 310 aaPredicted RBP13.23□□□□□ -0.29
RAB39B-201ENST00000369454 RNF41Q9H4P4 317 aaPredicted RBP13.23□□□□□ -0.29
RAB39B-201ENST00000369454 PPP6R2O75170 966 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 CYP2D6P10635 497 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 PRDX5P30044 214 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 AFMP43652 599 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 UBASH3AP57075 661 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 PDE4BQ07343 736 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 EARS2Q5JPH6 523 aaKnown RBP13.23□□□□□ -0.29
RAB39B-201ENST00000369454 ARMCX5Q6P1M9 558 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 OLFM4Q6UX06 510 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 KRBA2Q6ZNG9 492 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 ENAHQ8N8S7 591 aaPredicted RBP13.23□□□□□ -0.29
RAB39B-201ENST00000369454 AK7Q96M32 723 aa13.23□□□□□ -0.29
RAB39B-201ENST00000369454 TMEM232C9JQI7 657 aa13.22□□□□□ -0.29
RAB39B-201ENST00000369454 RBM6P78332 1123 aaKnown RBP13.22□□□□□ -0.29
RAB39B-201ENST00000369454 WASF1Q92558 559 aa13.22□□□□□ -0.29
RAB39B-201ENST00000369454 MYH14Q7Z406 1995 aaKnown RBP13.22□□□□□ -0.29
RAB39B-201ENST00000369454 DOT1LQ8TEK3 1739 aa13.22□□□□□ -0.29
RAB39B-201ENST00000369454 SMTNL1A8MU46 457 aa13.22□□□□□ -0.29
RAB39B-201ENST00000369454 DEXIO95424 95 aa13.22□□□□□ -0.29
RAB39B-201ENST00000369454 KLHL10Q6JEL2 608 aa13.22□□□□□ -0.29
RAB39B-201ENST00000369454 NBPF5PQ86XG9 351 aaPredicted RBP13.22□□□□□ -0.29
RAB39B-201ENST00000369454 FAM177A1Q8N128 213 aaPredicted RBP13.22□□□□□ -0.29
RAB39B-201ENST00000369454 ZNF384Q8TF68 577 aa13.22□□□□□ -0.29
RAB39B-201ENST00000369454 HPSEQ9Y251 543 aa13.22□□□□□ -0.29
RAB39B-201ENST00000369454 CUTAO60888 179 aa13.22□□□□□ -0.29
RAB39B-201ENST00000369454 COBLO75128 1261 aa13.22□□□□□ -0.29
RAB39B-201ENST00000369454 PDCL2Q8N4E4 241 aa13.22□□□□□ -0.29
RAB39B-201ENST00000369454 PNPLA7Q6ZV29 1317 aa13.22□□□□□ -0.29
RAB39B-201ENST00000369454 CDK11BP21127 795 aaKnown RBP13.21□□□□□ -0.29
RAB39B-201ENST00000369454 BMP6P22004 513 aa13.21□□□□□ -0.29
RAB39B-201ENST00000369454 TXNRD3Q86VQ6 643 aa13.21□□□□□ -0.29
RAB39B-201ENST00000369454 DHX58Q96C10 678 aa13.21□□□□□ -0.29
RAB39B-201ENST00000369454 GPR101Q96P66 508 aaPredicted RBP13.21□□□□□ -0.29
RAB39B-201ENST00000369454 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
RAB39B-201ENST00000369454 TMX1Q9H3N1 280 aa13.21□□□□□ -0.29
RAB39B-201ENST00000369454 CCDC196A0A1B0GTZ2 297 aa13.21□□□□□ -0.29
RAB39B-201ENST00000369454 GNPATO15228 680 aa13.21□□□□□ -0.29
RAB39B-201ENST00000369454 GTF2F1P35269 517 aaKnown RBP eCLIP13.21□□□□□ -0.29
RAB39B-201ENST00000369454 MYL5Q02045 173 aa13.21□□□□□ -0.29
RAB39B-201ENST00000369454 SHISA4Q96DD7 197 aa13.21□□□□□ -0.29
RAB39B-201ENST00000369454 EPSTI1Q96J88 318 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms