RNA–Protein interactions for RNA: ENST00000368892.8

VPS72-202, Transcript of vacuolar protein sorting 72 homolog, humanhuman

APPRIS P1 TSL 1 (best)

Gene VPS72, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-202ENST00000368892 STAG1Q8WVM7 1258 aa24.4■■□□□ 1.5
VPS72-202ENST00000368892 CSRNP1Q96S65 589 aa24.4■■□□□ 1.5
VPS72-202ENST00000368892 GPBP1L1Q9HC44 474 aaPredicted RBP24.4■■□□□ 1.5
VPS72-202ENST00000368892 SERPINB13Q9UIV8 391 aa24.4■■□□□ 1.5
VPS72-202ENST00000368892 SNX14Q9Y5W7 946 aa24.4■■□□□ 1.5
VPS72-202ENST00000368892 MYH1P12882 1939 aa24.4■■□□□ 1.5
VPS72-202ENST00000368892 LAMA4Q16363 1823 aa24.4■■□□□ 1.5
VPS72-202ENST00000368892 PCP11498 1178 aaKnown RBP24.4■■□□□ 1.5
VPS72-202ENST00000368892 C16orf86Q6ZW13 317 aa24.4■■□□□ 1.5
VPS72-202ENST00000368892 CDC37L1Q7L3B6 337 aa24.4■■□□□ 1.5
VPS72-202ENST00000368892 ZSCAN29Q8IWY8 852 aaPredicted RBP24.4■■□□□ 1.5
VPS72-202ENST00000368892 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.4■■□□□ 1.5
VPS72-202ENST00000368892 TBC1D12O60347 775 aa24.39■■□□□ 1.49
VPS72-202ENST00000368892 ZKSCAN1P17029 563 aaPredicted RBP24.39■■□□□ 1.49
VPS72-202ENST00000368892 CTDSPL2Q05D32 466 aa24.39■■□□□ 1.49
VPS72-202ENST00000368892 AKNAD1Q5T1N1 836 aa24.39■■□□□ 1.49
VPS72-202ENST00000368892 DNAJC18Q9H819 358 aa24.39■■□□□ 1.49
VPS72-202ENST00000368892 LAMB1P07942 1786 aa24.38■■□□□ 1.49
VPS72-202ENST00000368892 SIPA1L1O43166 1804 aa24.38■■□□□ 1.49
VPS72-202ENST00000368892 E7EWF7 191 aa24.38■■□□□ 1.49
VPS72-202ENST00000368892 KIF3CO14782 793 aa24.38■■□□□ 1.49
VPS72-202ENST00000368892 SLC4A8Q2Y0W8 1093 aa24.38■■□□□ 1.49
VPS72-202ENST00000368892 STOX1Q6ZVD7 989 aa24.38■■□□□ 1.49
VPS72-202ENST00000368892 HERC5Q9UII4 1024 aaKnown RBP24.38■■□□□ 1.49
VPS72-202ENST00000368892 ADM5C9JUS6 153 aa24.37■■□□□ 1.49
VPS72-202ENST00000368892 ORC4O43929 436 aa24.37■■□□□ 1.49
VPS72-202ENST00000368892 SLC3A2P08195 630 aaKnown RBP24.37■■□□□ 1.49
VPS72-202ENST00000368892 NBPF12Q5TAG4 269 aaPredicted RBP24.37■■□□□ 1.49
VPS72-202ENST00000368892 DYNLL2Q96FJ2 89 aa24.37■■□□□ 1.49
VPS72-202ENST00000368892 KIF2CQ99661 725 aa24.37■■□□□ 1.49
VPS72-202ENST00000368892 SWAP70Q9UH65 585 aa24.37■■□□□ 1.49
VPS72-202ENST00000368892 CLEC11AQ9Y240 323 aa24.37■■□□□ 1.49
VPS72-202ENST00000368892 NT5C2P49902 561 aa24.36■■□□□ 1.49
VPS72-202ENST00000368892 KRT32Q14532 448 aa24.36■■□□□ 1.49
VPS72-202ENST00000368892 MAP1SQ66K74 1059 aaPredicted RBP24.36■■□□□ 1.49
VPS72-202ENST00000368892 USP48Q86UV5 1035 aa24.36■■□□□ 1.49
VPS72-202ENST00000368892 RNF41Q9H4P4 317 aaPredicted RBP24.36■■□□□ 1.49
VPS72-202ENST00000368892 POLR2AP24928 1970 aaKnown RBP24.36■■□□□ 1.49
VPS72-202ENST00000368892 YY1P25490 414 aa24.35■■□□□ 1.49
VPS72-202ENST00000368892 CDK8P49336 464 aa24.35■■□□□ 1.49
VPS72-202ENST00000368892 TATDN1Q6P1N9 297 aa24.35■■□□□ 1.49
VPS72-202ENST00000368892 MFSD6Q6ZSS7 791 aa24.35■■□□□ 1.49
VPS72-202ENST00000368892 GLIS2Q9BZE0 524 aaPredicted RBP24.35■■□□□ 1.49
VPS72-202ENST00000368892 INCENPQ9NQS7 918 aa24.35■■□□□ 1.49
VPS72-202ENST00000368892 SHMT1P34896 483 aa24.35■■□□□ 1.49
VPS72-202ENST00000368892 PDE4BQ07343 736 aa24.35■■□□□ 1.49
VPS72-202ENST00000368892 ADCK5Q3MIX3 580 aa24.35■■□□□ 1.49
VPS72-202ENST00000368892 SUPT20HL1Q3ZLR7 823 aa24.35■■□□□ 1.49
VPS72-202ENST00000368892 PRAMEF18Q5VWM3 479 aa24.35■■□□□ 1.49
VPS72-202ENST00000368892 HOOK2Q96ED9 719 aa24.35■■□□□ 1.49
VPS72-202ENST00000368892 TM6SF1Q9BZW5 370 aa24.35■■□□□ 1.49
VPS72-202ENST00000368892 SSC5DA1L4H1 1573 aa24.35■■□□□ 1.49
VPS72-202ENST00000368892 SLURP2P0DP57 97 aa24.34■■□□□ 1.49
VPS72-202ENST00000368892 CHADLQ6NUI6 762 aa24.34■■□□□ 1.49
VPS72-202ENST00000368892 DLK2Q6UY11 383 aa24.34■■□□□ 1.49
VPS72-202ENST00000368892 SLC44A5Q8NCS7 719 aa24.34■■□□□ 1.49
VPS72-202ENST00000368892 ZNF287Q9HBT7 754 aa24.34■■□□□ 1.49
VPS72-202ENST00000368892 NEDD4P46934 1319 aa24.34■■□□□ 1.49
VPS72-202ENST00000368892 CDCA5Q96FF9 252 aa24.33■■□□□ 1.49
VPS72-202ENST00000368892 CNNM2Q9H8M5 875 aa24.33■■□□□ 1.49
VPS72-202ENST00000368892 RASA1P20936 1047 aa24.32■■□□□ 1.48
VPS72-202ENST00000368892 CRACR2BQ8N4Y2 399 aaPredicted RBP24.32■■□□□ 1.48
VPS72-202ENST00000368892 ZNF784Q8NCA9 323 aaPredicted RBP24.32■■□□□ 1.48
VPS72-202ENST00000368892 NKX2-3Q8TAU0 364 aa24.32■■□□□ 1.48
VPS72-202ENST00000368892 ITGBL1O95965 494 aaPredicted RBP24.31■■□□□ 1.48
VPS72-202ENST00000368892 COL9A3Q14050 684 aaPredicted RBP24.31■■□□□ 1.48
VPS72-202ENST00000368892 MB21D2Q8IYB1 491 aaPredicted RBP24.31■■□□□ 1.48
VPS72-202ENST00000368892 NCOA7Q8NI08 942 aa24.31■■□□□ 1.48
VPS72-202ENST00000368892 KRT23Q9C075 422 aa24.31■■□□□ 1.48
VPS72-202ENST00000368892 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.31■■□□□ 1.48
VPS72-202ENST00000368892 FAM196BA6NMK8 535 aa24.3■■□□□ 1.48
VPS72-202ENST00000368892 PHF20L1A8MW92 1017 aa24.3■■□□□ 1.48
VPS72-202ENST00000368892 PRDM1O75626 825 aa24.3■■□□□ 1.48
VPS72-202ENST00000368892 DCAF15Q66K64 600 aa24.3■■□□□ 1.48
VPS72-202ENST00000368892 MIGA2Q7L4E1 593 aa24.3■■□□□ 1.48
VPS72-202ENST00000368892 STK11IPQ8N1F8 1099 aa24.3■■□□□ 1.48
VPS72-202ENST00000368892 NEK1Q96PY6 1258 aa24.3■■□□□ 1.48
VPS72-202ENST00000368892 MKNK2Q9HBH9 465 aa24.3■■□□□ 1.48
VPS72-202ENST00000368892 ZSWIM6Q9HCJ5 1215 aa24.3■■□□□ 1.48
VPS72-202ENST00000368892 ZNF112Q9UJU3 913 aa24.3■■□□□ 1.48
VPS72-202ENST00000368892 PSMA5P28066 241 aa24.3■■□□□ 1.48
VPS72-202ENST00000368892 TRDNQ13061 729 aa24.3■■□□□ 1.48
VPS72-202ENST00000368892 HMGB1P09429 215 aaKnown RBP24.29■■□□□ 1.48
VPS72-202ENST00000368892 ESR2Q92731 530 aa24.29■■□□□ 1.48
VPS72-202ENST00000368892 CCDC17Q96LX7 622 aa24.29■■□□□ 1.48
VPS72-202ENST00000368892 JAKMIP1Q96N16 626 aaKnown RBP24.29■■□□□ 1.48
VPS72-202ENST00000368892 ZSWIM5Q9P217 1185 aa24.29■■□□□ 1.48
VPS72-202ENST00000368892 B4E1Z4 1266 aa24.28■■□□□ 1.48
VPS72-202ENST00000368892 RRP1BQ14684 758 aaKnown RBP24.28■■□□□ 1.48
VPS72-202ENST00000368892 TRIM34Q9BYJ4 488 aa24.28■■□□□ 1.48
VPS72-202ENST00000368892 PLIN4Q96Q06 1357 aa24.27■■□□□ 1.48
VPS72-202ENST00000368892 TRAF5O00463 557 aa24.27■■□□□ 1.48
VPS72-202ENST00000368892 KDM4AO75164 1064 aa24.27■■□□□ 1.48
VPS72-202ENST00000368892 EXOSC10Q01780 885 aaKnown RBP24.27■■□□□ 1.48
VPS72-202ENST00000368892 RALYLQ86SE5 291 aaKnown RBP24.27■■□□□ 1.48
VPS72-202ENST00000368892 ZNF444Q8N0Y2 327 aaPredicted RBP24.27■■□□□ 1.48
VPS72-202ENST00000368892 KLRG1Q96E93 195 aa24.27■■□□□ 1.48
VPS72-202ENST00000368892 ZNF341Q9BYN7 854 aa24.27■■□□□ 1.48
VPS72-202ENST00000368892 WDR19Q8NEZ3 1342 aa24.26■■□□□ 1.47
VPS72-202ENST00000368892 USP2O75604 605 aaPredicted RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms