RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 CSADQ9Y600 493 aa17.5■□□□□ 0.39
NUCKS1-201ENST00000367142 H7C1D1 291 aa17.5■□□□□ 0.39
NUCKS1-201ENST00000367142 DNM3Q9UQ16 869 aa17.5■□□□□ 0.39
NUCKS1-201ENST00000367142 UTP11Q9Y3A2 253 aaKnown RBP17.5■□□□□ 0.39
NUCKS1-201ENST00000367142 B4E1Z4 1266 aa17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 RHOXF2BP0C7M4 288 aa17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 CPXCR1Q8N123 301 aa17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 RHOXF2Q9BQY4 288 aa17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 LACTBP83111 547 aaPredicted RBP17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 PPP2R5DQ14738 602 aa17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 DLGAP5Q15398 846 aa17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 ZEB2O60315 1214 aa17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 BAG6P46379 1132 aa17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 KIF11P52732 1056 aa17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 SEPT6Q14141 434 aa17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 NONOQ15233 471 aaKnown RBP eCLIP17.49■□□□□ 0.394e-7■■■□□ 15.3
NUCKS1-201ENST00000367142 MAEAQ7L5Y9 396 aa17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 CEP85Q6P2H3 762 aa17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 MYCT1Q8N699 235 aa17.49■□□□□ 0.39
NUCKS1-201ENST00000367142 EP400NLQ6ZTU2 488 aa17.48■□□□□ 0.39
NUCKS1-201ENST00000367142 FAM89AQ96GI7 184 aa17.48■□□□□ 0.39
NUCKS1-201ENST00000367142 EBAG9O00559 213 aa17.48■□□□□ 0.39
NUCKS1-201ENST00000367142 HOXC9P31274 260 aa17.48■□□□□ 0.39
NUCKS1-201ENST00000367142 A0A1B0GUL7 405 aa17.48■□□□□ 0.39
NUCKS1-201ENST00000367142 VIMP08670 466 aaKnown RBP17.48■□□□□ 0.39
NUCKS1-201ENST00000367142 LGSNQ5TDP6 509 aa17.48■□□□□ 0.39
NUCKS1-201ENST00000367142 IP6K1Q92551 441 aa17.48■□□□□ 0.39
NUCKS1-201ENST00000367142 CD19P15391 556 aa17.48■□□□□ 0.39
NUCKS1-201ENST00000367142 USH1GQ495M9 461 aa17.48■□□□□ 0.39
NUCKS1-201ENST00000367142 IRX5P78411 483 aaPredicted RBP17.48■□□□□ 0.39
NUCKS1-201ENST00000367142 BAG1Q99933 345 aaPredicted RBP17.48■□□□□ 0.39
NUCKS1-201ENST00000367142 OTUD6AQ7L8S5 288 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 FAM76AQ8TAV0 307 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 SNX29Q8TEQ0 813 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 DDX21Q9NR30 783 aaKnown RBP eCLIP17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 AATFQ9NY61 560 aaKnown RBP eCLIP17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 ABCC1P33527 1531 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 NPATQ14207 1427 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 PALM3A6NDB9 673 aaPredicted RBP17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 CAPN2P17655 700 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 RAB3IPQ96QF0 476 aaPredicted RBP17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 TNFAIP1Q13829 316 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 VPS18Q9P253 973 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 BCRP11274 1271 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 CYP26C1Q6V0L0 522 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 CTTNBP2NLQ9P2B4 639 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 LRWD1Q9UFC0 647 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 USTQ9Y2C2 406 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 ZFYVE9O95405 1425 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 GOLGA6CA6NDK9 693 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 GOLGA6BA6NDN3 693 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 GOLGA6DP0CG33 693 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 XAGE2Q96GT9 111 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 NUP58Q9BVL2 599 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 GOLGA6AQ9NYA3 693 aa17.47■□□□□ 0.39
NUCKS1-201ENST00000367142 EXOC3O60645 756 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 CEP85LQ5SZL2 805 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 TBC1D22AQ8WUA7 517 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 SNX21Q969T3 373 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 MRRFQ96E11 262 aaKnown RBP17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 V9GY48 417 aaPredicted RBP17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 FAM47CQ5HY64 1035 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 TTC38Q5R3I4 469 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 CSGALNACT2Q8N6G5 542 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 MED10Q9BTT4 135 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 METTL22Q9BUU2 404 aaPredicted RBP17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 LAMC3Q9Y6N6 1575 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 C11orf95C9JLR9 678 aaPredicted RBP17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 OATP04181 439 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 SLC12A2P55011 1212 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 PPP2R5CQ13362 524 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 GNPTABQ3T906 1256 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 GPR162Q16538 588 aa17.46■□□□□ 0.39
NUCKS1-201ENST00000367142 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.46■□□□□ 0.397e-30■■□□□ 11.5
NUCKS1-201ENST00000367142 PABPC4Q13310 644 aaKnown RBP eCLIP17.45■□□□□ 0.385e-7■■■□□ 17
NUCKS1-201ENST00000367142 TNNI3KQ59H18 835 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 DNAJC21Q5F1R6 531 aaKnown RBP17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 MICALL1Q8N3F8 863 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 ZRANB1Q9UGI0 708 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 FPGT-TNNI3KV9GXZ4 949 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 GIGYF1O75420 1035 aaPredicted RBP17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 CFBP00751 764 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 NEDD9Q14511 834 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 GLG1Q92896 1179 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 SDCCAG8Q86SQ7 713 aaPredicted RBP17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 PPIP5K2O43314 1243 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 FAM160A1Q05DH4 1040 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 CALCRLQ16602 461 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 IGSF22Q8N9C0 903 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 FAM193BQ96PV7 902 aaPredicted RBP17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 RPS6KB1P23443 525 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 DPY19L2Q6NUT2 758 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 ANO3Q9BYT9 981 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.45■□□□□ 0.382e-9■□□□□ 10.7
NUCKS1-201ENST00000367142 TTLL3Q9Y4R7 772 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 SYNRGQ9UMZ2 1314 aa17.45■□□□□ 0.38
NUCKS1-201ENST00000367142 APBA3O96018 575 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 ATF7P17544 494 aaPredicted RBP17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 TCP10Q12799 353 aa17.44■□□□□ 0.38
NUCKS1-201ENST00000367142 PAK1Q13153 545 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms