RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ZNF496Q96IT1 587 aaPredicted RBP17.03■□□□□ 0.32
UBAP1-202ENST00000359544 DRC1Q96MC2 740 aa17.03■□□□□ 0.32
UBAP1-202ENST00000359544 BICC1Q9H694 974 aaKnown RBP17.03■□□□□ 0.32
UBAP1-202ENST00000359544 UTRNP46939 3433 aa17.02■□□□□ 0.32
UBAP1-202ENST00000359544 WDHD1O75717 1129 aaPredicted RBP17.02■□□□□ 0.32
UBAP1-202ENST00000359544 MMP14P50281 582 aa17.02■□□□□ 0.32
UBAP1-202ENST00000359544 AXDND1Q5T1B0 1012 aaPredicted RBP17.02■□□□□ 0.32
UBAP1-202ENST00000359544 ANO1Q5XXA6 986 aa17.02■□□□□ 0.32
UBAP1-202ENST00000359544 FOXR1Q6PIV2 292 aa17.02■□□□□ 0.32
UBAP1-202ENST00000359544 LRRC31Q6UY01 552 aa17.02■□□□□ 0.32
UBAP1-202ENST00000359544 CCDC102AQ96A19 550 aa17.02■□□□□ 0.32
UBAP1-202ENST00000359544 AKAP2Q9Y2D5 859 aa17.02■□□□□ 0.32
UBAP1-202ENST00000359544 PNPLA7Q6ZV29 1317 aa17.02■□□□□ 0.32
UBAP1-202ENST00000359544 PPFIA4O75335 1185 aa17.02■□□□□ 0.31
UBAP1-202ENST00000359544 CNNM3Q8NE01 707 aa17.02■□□□□ 0.31
UBAP1-202ENST00000359544 EDC3Q96F86 508 aaKnown RBP17.02■□□□□ 0.31
UBAP1-202ENST00000359544 ABCB6Q9NP58 842 aa17.02■□□□□ 0.31
UBAP1-202ENST00000359544 FANCLQ9NW38 375 aa17.02■□□□□ 0.31
UBAP1-202ENST00000359544 SH3TC1Q8TE82 1336 aa17.02■□□□□ 0.31
UBAP1-202ENST00000359544 ADAMTS7Q9UKP4 1686 aa17.01■□□□□ 0.31
UBAP1-202ENST00000359544 KIF5CO60282 957 aa17.01■□□□□ 0.31
UBAP1-202ENST00000359544 ANXA1P04083 346 aa17.01■□□□□ 0.31
UBAP1-202ENST00000359544 CASP8Q14790 479 aa17.01■□□□□ 0.31
UBAP1-202ENST00000359544 KARSQ15046 597 aaKnown RBP17.01■□□□□ 0.31
UBAP1-202ENST00000359544 ZNF790Q6PG37 636 aa17.01■□□□□ 0.31
UBAP1-202ENST00000359544 CCDC91Q7Z6B0 441 aa17.01■□□□□ 0.31
UBAP1-202ENST00000359544 TTC5Q8N0Z6 440 aa17.01■□□□□ 0.31
UBAP1-202ENST00000359544 LINS1Q8NG48 757 aa17.01■□□□□ 0.31
UBAP1-202ENST00000359544 ZSWIM4Q9H7M6 989 aa17.01■□□□□ 0.31
UBAP1-202ENST00000359544 INTS13Q9NVM9 706 aa17.01■□□□□ 0.31
UBAP1-202ENST00000359544 LOC102724159A0A0B4J2E5 919 aa17.01■□□□□ 0.31
UBAP1-202ENST00000359544 GNPATO15228 680 aa17.01■□□□□ 0.31
UBAP1-202ENST00000359544 N4BP1O75113 896 aaKnown RBP17.01■□□□□ 0.31
UBAP1-202ENST00000359544 POLR3DP05423 398 aaPredicted RBP17.01■□□□□ 0.31
UBAP1-202ENST00000359544 FDPSP14324 419 aaKnown RBP17.01■□□□□ 0.31
UBAP1-202ENST00000359544 PWP2Q15269 919 aaKnown RBP17.01■□□□□ 0.31
UBAP1-202ENST00000359544 SWT1Q5T5J6 900 aaKnown RBP17.01■□□□□ 0.31
UBAP1-202ENST00000359544 MMS22LQ6ZRQ5 1243 aa17.01■□□□□ 0.31
UBAP1-202ENST00000359544 PUF60Q9UHX1 559 aaKnown RBP17.01■□□□□ 0.31
UBAP1-202ENST00000359544 EIF5P55010 431 aaKnown RBP17■□□□□ 0.31
UBAP1-202ENST00000359544 CWF19L2Q2TBE0 894 aaKnown RBP17■□□□□ 0.31
UBAP1-202ENST00000359544 COL23A1Q86Y22 540 aaPredicted RBP17■□□□□ 0.31
UBAP1-202ENST00000359544 JMYQ8N9B5 988 aa17■□□□□ 0.31
UBAP1-202ENST00000359544 PNKPQ96T60 521 aa17■□□□□ 0.31
UBAP1-202ENST00000359544 DSCC1Q9BVC3 393 aa17■□□□□ 0.31
UBAP1-202ENST00000359544 A0A087WUV0 522 aaPredicted RBP17■□□□□ 0.31
UBAP1-202ENST00000359544 MROH7-TTC4A0A0A0MT08 1334 aa17■□□□□ 0.31
UBAP1-202ENST00000359544 C5P01031 1676 aa17■□□□□ 0.31
UBAP1-202ENST00000359544 PIP4K2AP48426 406 aaPredicted RBP17■□□□□ 0.31
UBAP1-202ENST00000359544 DNAJC21Q5F1R6 531 aaKnown RBP17■□□□□ 0.31
UBAP1-202ENST00000359544 MSL1Q68DK7 614 aa17■□□□□ 0.31
UBAP1-202ENST00000359544 MCTP2Q6DN12 878 aa17■□□□□ 0.31
UBAP1-202ENST00000359544 KAZALD1Q96I82 304 aa17■□□□□ 0.31
UBAP1-202ENST00000359544 TOMM22Q9NS69 142 aa17■□□□□ 0.31
UBAP1-202ENST00000359544 TADA2BQ86TJ2 420 aa16.99■□□□□ 0.31
UBAP1-202ENST00000359544 NAA15Q9BXJ9 866 aaKnown RBP16.99■□□□□ 0.31
UBAP1-202ENST00000359544 HPSEQ9Y251 543 aa16.99■□□□□ 0.31
UBAP1-202ENST00000359544 ADKP55263 362 aaKnown RBP16.99■□□□□ 0.31
UBAP1-202ENST00000359544 SLC39A14Q15043 492 aa16.99■□□□□ 0.31
UBAP1-202ENST00000359544 FBXL16Q8N461 479 aa16.99■□□□□ 0.31
UBAP1-202ENST00000359544 CTCFLQ8NI51 663 aaPredicted RBP16.99■□□□□ 0.31
UBAP1-202ENST00000359544 DESI2Q9BSY9 194 aa16.99■□□□□ 0.31
UBAP1-202ENST00000359544 KCPQ6ZWJ8 1503 aa16.98■□□□□ 0.31
UBAP1-202ENST00000359544 PANX2Q96RD6 677 aa16.98■□□□□ 0.31
UBAP1-202ENST00000359544 CEP89Q96ST8 783 aa16.98■□□□□ 0.31
UBAP1-202ENST00000359544 FAM204AQ9H8W3 233 aa16.98■□□□□ 0.31
UBAP1-202ENST00000359544 VIPAS39Q9H9C1 493 aa16.98■□□□□ 0.31
UBAP1-202ENST00000359544 MRPL44Q9H9J2 332 aaKnown RBP16.98■□□□□ 0.31
UBAP1-202ENST00000359544 E7EWF7 191 aa16.98■□□□□ 0.31
UBAP1-202ENST00000359544 PPP6R2O75170 966 aa16.98■□□□□ 0.31
UBAP1-202ENST00000359544 PNOCQ13519 176 aa16.98■□□□□ 0.31
UBAP1-202ENST00000359544 AFAP1L1Q8TED9 768 aa16.98■□□□□ 0.31
UBAP1-202ENST00000359544 HAUS7Q99871 368 aa16.98■□□□□ 0.31
UBAP1-202ENST00000359544 HELLSQ9NRZ9 838 aa16.98■□□□□ 0.31
UBAP1-202ENST00000359544 C4BP0C0L5 1744 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 TAF1LQ8IZX4 1826 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.97■□□□□ 0.31
UBAP1-202ENST00000359544 FAM237AA0A1B0GTK4 181 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 CTAGE9A4FU28 777 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 DDX58O95786 925 aaKnown RBP16.97■□□□□ 0.31
UBAP1-202ENST00000359544 CRKLP46109 303 aaKnown RBP16.97■□□□□ 0.31
UBAP1-202ENST00000359544 WHAMMP3Q1A5X7 153 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 DACH1Q9UI36 760 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 HOOK1Q9UJC3 728 aaKnown RBP16.97■□□□□ 0.31
UBAP1-202ENST00000359544 DBNLQ9UJU6 430 aaKnown RBP16.97■□□□□ 0.31
UBAP1-202ENST00000359544 CTAGE15A4D2H0 777 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 PPFIA3O75145 1194 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 CTAGE8P0CG41 777 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 KIF4BQ2VIQ3 1234 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 TNNI3KQ59H18 835 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 OTUD7BQ6GQQ9 843 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 CTAGE6Q86UF2 777 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 TICAM2Q86XR7 235 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 CTAGE4Q8IX94 777 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 RAI14Q9P0K7 980 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 FPGT-TNNI3KV9GXZ4 949 aa16.97■□□□□ 0.31
UBAP1-202ENST00000359544 AKR1B15C9JRZ8 316 aaPredicted RBP16.96■□□□□ 0.31
UBAP1-202ENST00000359544 VSNL1P62760 191 aa16.96■□□□□ 0.31
UBAP1-202ENST00000359544 PTPN21Q16825 1174 aa16.96■□□□□ 0.31
UBAP1-202ENST00000359544 LZTFL1Q9NQ48 299 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms