RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 PRKAB2O43741 272 aa10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 RANBP6O60518 1105 aaKnown RBP10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 TOM1O60784 492 aa10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 IFIT1BQ5T764 474 aaKnown RBP10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 SPTY2D1Q68D10 685 aaPredicted RBP10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 NBPF5PQ86XG9 351 aaPredicted RBP10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 FANCBQ8NB91 859 aa10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 MMP1P03956 469 aa10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 AIFM3Q96NN9 605 aa10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 ZKSCAN3Q9BRR0 538 aa10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 GJB4Q9NTQ9 266 aa10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 SNAP23O00161 211 aa10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 SFPQP23246 707 aaKnown RBP eCLIP10.7□□□□□ -0.73e-7■■□□□ 13.3
GTF3C2-202ENST00000359541 ERFEQ4G0M1 354 aa10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 TPTE2Q6XPS3 522 aa10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 DHX40Q8IX18 779 aaKnown RBP10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 CTCFLQ8NI51 663 aaPredicted RBP10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 BRIP1Q9BX63 1249 aa10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 RNF26Q9BY78 433 aaPredicted RBP10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 KCNH3Q9ULD8 1083 aa10.7□□□□□ -0.7
GTF3C2-202ENST00000359541 IKBKBO14920 756 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 SERPINC1P01008 464 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 SKILP12757 684 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 TNNT1P13805 278 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 GYG1P46976 350 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 NTRK3Q16288 839 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 TNKSO95271 1327 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 AXDND1Q5T1B0 1012 aaPredicted RBP10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 LRRC8AQ8IWT6 810 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 C16orf45Q96MC5 204 aaPredicted RBP10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 ANAPC4Q9UJX5 808 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 AKAP11Q9UKA4 1901 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 CDK11BP21127 795 aaKnown RBP10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 NT5C2P49902 561 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 MYL5Q02045 173 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 PDE4BQ07343 736 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 DPCR1Q3MIW9 517 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 RESP18Q5W5W9 173 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 CCDC82Q8N4S0 544 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 CCDC112Q8NEF3 446 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 NID2Q14112 1375 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 ZNF804BA4D1E1 1349 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 CNTNAP4Q9C0A0 1308 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 NWD2Q9ULI1 1742 aa10.69□□□□□ -0.7
GTF3C2-202ENST00000359541 RPS8P62241 208 aaKnown RBP10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 CRACR2BQ8N4Y2 399 aaPredicted RBP10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 ZSCAN10Q96SZ4 725 aaPredicted RBP10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 NRBP1Q9UHY1 535 aa10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 HIBADHP31937 336 aaKnown RBP10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 LRMPQ12912 555 aa10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 PTPN14Q15678 1187 aa10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 SDR42E1Q8WUS8 393 aa10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 NGLY1Q96IV0 654 aa10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 KRT2P35908 639 aa10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 CACTINQ8WUQ7 758 aaKnown RBP10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 ERCC4Q92889 916 aaPredicted RBP10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 COL16A1Q07092 1604 aaPredicted RBP10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 MYH15Q9Y2K3 1946 aa10.68□□□□□ -0.7
GTF3C2-202ENST00000359541 TRIM75PA6NK02 468 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 BTBD18B2RXH4 712 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 DDAH1O94760 285 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 KRBA2Q6ZNG9 492 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 TMC6Q7Z403 805 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 DZIP1Q86YF9 867 aaKnown RBP10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 SENP2Q9HC62 589 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 IFNKQ9P0W0 207 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 MINPP1Q9UNW1 487 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 RTCBQ9Y3I0 505 aaKnown RBP10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 ARAP2Q8WZ64 1704 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 ATP2B1P20020 1258 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 KIF5BP33176 963 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 GTF2F1P35269 517 aaKnown RBP eCLIP10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 FAM98CQ17RN3 349 aaKnown RBP10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 ELOA2Q8IYF1 753 aaPredicted RBP10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 SMARCE1Q969G3 411 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 VGLL3A8MV65 326 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 WDHD1O75717 1129 aaPredicted RBP10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 TUBB4AP04350 444 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 PTPAQ15257 358 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 CCDC178Q5BJE1 867 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 ZNF592Q92610 1267 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 PYM1Q9BRP8 204 aaKnown RBP10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 INCENPQ9NQS7 918 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 ARPP21Q9UBL0 812 aaPredicted RBP10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 NARFQ9UHQ1 456 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 CFAP100Q494V2 611 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 SLC10A5Q5PT55 438 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 RC3H1Q5TC82 1133 aaKnown RBP10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 ATP8A2Q9NTI2 1148 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 KCNJ14Q9UNX9 436 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 HPSEQ9Y251 543 aa10.67□□□□□ -0.7
GTF3C2-202ENST00000359541 PDS5AQ29RF7 1337 aaKnown RBP10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 FAM237AA0A1B0GTK4 181 aa10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 CEP135Q66GS9 1140 aa10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 SHC4Q6S5L8 630 aa10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 ZNF579Q8NAF0 562 aaKnown RBP10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 FAM217BQ9NTX9 383 aaPredicted RBP10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 TUBE1Q9UJT0 475 aa10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 RPS6KA4O75676 772 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms