RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ZNF34Q8IZ26 560 aa12.79□□□□□ -0.36
SSU72-202ENST00000359060 SLC4A9Q96Q91 983 aa12.79□□□□□ -0.36
SSU72-202ENST00000359060 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.79□□□□□ -0.36
SSU72-202ENST00000359060 SERTAD1Q9UHV2 236 aa12.79□□□□□ -0.36
SSU72-202ENST00000359060 PAXBP1Q9Y5B6 917 aa12.79□□□□□ -0.36
SSU72-202ENST00000359060 GSG1L2A8MUP6 293 aa12.79□□□□□ -0.36
SSU72-202ENST00000359060 FMR1NBQ8N0W7 255 aaPredicted RBP12.79□□□□□ -0.36
SSU72-202ENST00000359060 SAP30BPQ9UHR5 308 aaKnown RBP12.79□□□□□ -0.36
SSU72-202ENST00000359060 F8W031 263 aaPredicted RBP12.78□□□□□ -0.36
SSU72-202ENST00000359060 HEATR3Q7Z4Q2 680 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 ANKRD2Q9GZV1 360 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 PCDHA5Q9Y5H7 936 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 ARID4AP29374 1257 aaPredicted RBP12.78□□□□□ -0.36
SSU72-202ENST00000359060 UBE4AQ14139 1066 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 LRRC8AQ8IWT6 810 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 MRFAP1L1Q96HT8 127 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 LY9Q9HBG7 655 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 HPS5Q9UPZ3 1129 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 KIF2AO00139 706 aaPredicted RBP12.78□□□□□ -0.36
SSU72-202ENST00000359060 LDHCP07864 332 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 CALM1P0DP23 149 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 CALM2P0DP24 149 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 CALM3P0DP25 149 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 LIFRP42702 1097 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 PIK3AP1Q6ZUJ8 805 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 DNAI1Q9UI46 699 aa12.78□□□□□ -0.36
SSU72-202ENST00000359060 IPO7O95373 1038 aaKnown RBP12.77□□□□□ -0.36
SSU72-202ENST00000359060 IFNAR1P17181 557 aa12.77□□□□□ -0.36
SSU72-202ENST00000359060 ZSCAN10Q96SZ4 725 aaPredicted RBP12.77□□□□□ -0.36
SSU72-202ENST00000359060 KIF1AQ12756 1690 aa12.77□□□□□ -0.36
SSU72-202ENST00000359060 UBA7P41226 1012 aa12.77□□□□□ -0.36
SSU72-202ENST00000359060 IKQ13123 557 aaPredicted RBP12.77□□□□□ -0.36
SSU72-202ENST00000359060 CDK5RAP3Q96JB5 506 aa12.77□□□□□ -0.36
SSU72-202ENST00000359060 PLIN2Q99541 437 aa12.77□□□□□ -0.36
SSU72-202ENST00000359060 UBE2Q2LH0YL09 131 aa12.77□□□□□ -0.37
SSU72-202ENST00000359060 ITPK1Q13572 414 aa12.77□□□□□ -0.37
SSU72-202ENST00000359060 POSTNQ15063 836 aa12.77□□□□□ -0.37
SSU72-202ENST00000359060 CCDC144BQ3MJ40 725 aa12.77□□□□□ -0.37
SSU72-202ENST00000359060 SYT10Q6XYQ8 523 aa12.77□□□□□ -0.37
SSU72-202ENST00000359060 MARCH10Q8NA82 808 aaPredicted RBP12.77□□□□□ -0.37
SSU72-202ENST00000359060 CELF1Q92879 486 aaKnown RBP12.77□□□□□ -0.37
SSU72-202ENST00000359060 KCNF1Q9H3M0 494 aa12.77□□□□□ -0.37
SSU72-202ENST00000359060 NFE2L3Q9Y4A8 694 aa12.77□□□□□ -0.37
SSU72-202ENST00000359060 FMNL1O95466 1100 aaPredicted RBP12.77□□□□□ -0.37
SSU72-202ENST00000359060 ZNF287Q9HBT7 754 aa12.77□□□□□ -0.37
SSU72-202ENST00000359060 EPB41L4AQ9HCS5 686 aaPredicted RBP12.77□□□□□ -0.37
SSU72-202ENST00000359060 MAGEC2Q9UBF1 373 aaPredicted RBP12.77□□□□□ -0.37
SSU72-202ENST00000359060 RRAGBQ5VZM2 374 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 GRAMD1CQ8IYS0 662 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 SEC63Q9UGP8 760 aaKnown RBP12.76□□□□□ -0.37
SSU72-202ENST00000359060 LMO7Q8WWI1 1683 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 ZSCAN12O43309 604 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 GUCY1A2P33402 732 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 STIM1Q13586 685 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 TRAPPC3LQ5T215 181 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 KRBA2Q6ZNG9 492 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 CNBD1Q8NA66 436 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 UBXN4Q92575 508 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 FANCLQ9NW38 375 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 MPHOSPH10O00566 681 aaKnown RBP12.76□□□□□ -0.37
SSU72-202ENST00000359060 WDHD1O75717 1129 aaPredicted RBP12.76□□□□□ -0.37
SSU72-202ENST00000359060 RBM5P52756 815 aaKnown RBP eCLIP12.76□□□□□ -0.37
SSU72-202ENST00000359060 RBM6P78332 1123 aaKnown RBP12.76□□□□□ -0.37
SSU72-202ENST00000359060 TFAP4Q01664 338 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 LONRF3Q496Y0 759 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 BCL2L12Q9HB09 334 aa12.76□□□□□ -0.37
SSU72-202ENST00000359060 RBM28Q9NW13 759 aaKnown RBP12.76□□□□□ -0.37
SSU72-202ENST00000359060 ARGLU1Q9NWB6 273 aaPredicted RBP12.76□□□□□ -0.37
SSU72-202ENST00000359060 ABCC12Q96J65 1359 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 CAMTA2O94983 1202 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 SSBP05455 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
SSU72-202ENST00000359060 ATP1A3P13637 1013 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 ZSCAN29Q8IWY8 852 aaPredicted RBP12.75□□□□□ -0.37
SSU72-202ENST00000359060 IGDCC4Q8TDY8 1250 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 AGXT2Q9BYV1 514 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 PCDHB6Q9Y5E3 794 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 BMP15O95972 392 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 MMP1P03956 469 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 PICALMQ13492 652 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 TTC38Q5R3I4 469 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 ZNF771Q7L3S4 317 aaPredicted RBP12.75□□□□□ -0.37
SSU72-202ENST00000359060 CRACR2BQ8N4Y2 399 aaPredicted RBP12.75□□□□□ -0.37
SSU72-202ENST00000359060 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
SSU72-202ENST00000359060 MAPK8IP1Q9UQF2 711 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 RGPD5Q99666 1765 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 N4BP3O15049 544 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 GNG11P61952 73 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 MAPKAPK5Q8IW41 473 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 MINPP1Q9UNW1 487 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 KDM3BQ7LBC6 1761 aa12.75□□□□□ -0.37
SSU72-202ENST00000359060 ZNF804AQ7Z570 1209 aa12.74□□□□□ -0.37
SSU72-202ENST00000359060 PLA2G4DQ86XP0 818 aa12.74□□□□□ -0.37
SSU72-202ENST00000359060 PPP6R2O75170 966 aa12.74□□□□□ -0.37
SSU72-202ENST00000359060 IQCB1Q15051 598 aa12.74□□□□□ -0.37
SSU72-202ENST00000359060 TGFBRAP1Q8WUH2 860 aa12.74□□□□□ -0.37
SSU72-202ENST00000359060 DNAJC5Q9H3Z4 198 aa12.74□□□□□ -0.37
SSU72-202ENST00000359060 RIMBP2O15034 1052 aa12.74□□□□□ -0.37
SSU72-202ENST00000359060 UFL1O94874 794 aa12.74□□□□□ -0.37
SSU72-202ENST00000359060 PRDX5P30044 214 aa12.74□□□□□ -0.37
SSU72-202ENST00000359060 STAT6P42226 847 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms