RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 NPHP1O15259 732 aa28.15■■■□□ 2.1
CPNE1-202ENST00000352393 GUCY1A2P33402 732 aa28.15■■■□□ 2.1
CPNE1-202ENST00000352393 GOLGA8FQ08AF8 430 aa28.15■■■□□ 2.1
CPNE1-202ENST00000352393 GOLGA8DPQ0D2H9 430 aa28.15■■■□□ 2.1
CPNE1-202ENST00000352393 AKNAD1Q5T1N1 836 aa28.15■■■□□ 2.1
CPNE1-202ENST00000352393 NT5DC1Q5TFE4 455 aa28.15■■■□□ 2.1
CPNE1-202ENST00000352393 SPATA5Q8NB90 893 aa28.15■■■□□ 2.1
CPNE1-202ENST00000352393 UTP14AQ9BVJ6 771 aaKnown RBP28.15■■■□□ 2.1
CPNE1-202ENST00000352393 TRMT112Q9UI30 125 aaKnown RBP28.15■■■□□ 2.1
CPNE1-202ENST00000352393 HOOK1Q9UJC3 728 aaKnown RBP28.15■■■□□ 2.1
CPNE1-202ENST00000352393 MROH5Q6ZUA9 1318 aa28.15■■■□□ 2.1
CPNE1-202ENST00000352393 ARHGAP6O43182 974 aa28.15■■■□□ 2.1
CPNE1-202ENST00000352393 PTPREP23469 700 aa28.15■■■□□ 2.1
CPNE1-202ENST00000352393 POSTNQ15063 836 aa28.15■■■□□ 2.1
CPNE1-202ENST00000352393 DIS3L2Q8IYB7 885 aaKnown RBP28.15■■■□□ 2.1
CPNE1-202ENST00000352393 KRT23Q9C075 422 aa28.15■■■□□ 2.1
CPNE1-202ENST00000352393 PLCH1Q4KWH8 1693 aa28.14■■■□□ 2.1
CPNE1-202ENST00000352393 ZNF18P17022 549 aa28.14■■■□□ 2.1
CPNE1-202ENST00000352393 MAGEB6Q8N7X4 407 aa28.14■■■□□ 2.1
CPNE1-202ENST00000352393 ZSCAN12O43309 604 aa28.13■■■□□ 2.09
CPNE1-202ENST00000352393 SAFBQ15424 915 aaKnown RBP eCLIP28.13■■■□□ 2.091e-17■■■■□ 20.2
CPNE1-202ENST00000352393 TERF2Q15554 542 aa28.13■■■□□ 2.09
CPNE1-202ENST00000352393 SPECC1Q5M775 1068 aa28.13■■■□□ 2.09
CPNE1-202ENST00000352393 ZNF771Q7L3S4 317 aaPredicted RBP28.13■■■□□ 2.09
CPNE1-202ENST00000352393 SRRTQ9BXP5 876 aaKnown RBP28.13■■■□□ 2.09
CPNE1-202ENST00000352393 FOXP1Q9H334 677 aaPredicted RBP28.13■■■□□ 2.09
CPNE1-202ENST00000352393 GSG1L2A8MUP6 293 aa28.13■■■□□ 2.09
CPNE1-202ENST00000352393 CLCN6P51797 869 aa28.13■■■□□ 2.09
CPNE1-202ENST00000352393 GRIN1Q05586 938 aa28.13■■■□□ 2.09
CPNE1-202ENST00000352393 PTPN21Q16825 1174 aa28.13■■■□□ 2.09
CPNE1-202ENST00000352393 ARMT1Q9H993 441 aa28.13■■■□□ 2.09
CPNE1-202ENST00000352393 SLIT2O94813 1529 aa28.13■■■□□ 2.09
CPNE1-202ENST00000352393 VWA3AA6NCI4 1184 aa28.12■■■□□ 2.09
CPNE1-202ENST00000352393 PRR29P0C7W0 189 aa28.12■■■□□ 2.09
CPNE1-202ENST00000352393 SARSP49591 514 aaKnown RBP28.12■■■□□ 2.09
CPNE1-202ENST00000352393 MAP3K12Q12852 859 aa28.12■■■□□ 2.09
CPNE1-202ENST00000352393 RASGRF1Q13972 1273 aa28.12■■■□□ 2.09
CPNE1-202ENST00000352393 ARHGAP29Q52LW3 1261 aa28.12■■■□□ 2.09
CPNE1-202ENST00000352393 RILPL1Q5EBL4 403 aa28.12■■■□□ 2.09
CPNE1-202ENST00000352393 STAG1Q8WVM7 1258 aa28.12■■■□□ 2.09
CPNE1-202ENST00000352393 PPP2R2CQ9Y2T4 447 aa28.12■■■□□ 2.09
CPNE1-202ENST00000352393 PARP3Q9Y6F1 533 aa28.12■■■□□ 2.09
CPNE1-202ENST00000352393 MYH6P13533 1939 aa28.12■■■□□ 2.09
CPNE1-202ENST00000352393 CYP19A1P11511 503 aaPredicted RBP28.12■■■□□ 2.09
CPNE1-202ENST00000352393 FMR1Q06787 632 aaKnown RBP eCLIP28.12■■■□□ 2.097e-7■■■□□ 18.6
CPNE1-202ENST00000352393 RTN1Q16799 776 aa28.12■■■□□ 2.09
CPNE1-202ENST00000352393 KCNJ14Q9UNX9 436 aa28.12■■■□□ 2.09
CPNE1-202ENST00000352393 TADA3O75528 432 aa28.11■■■□□ 2.09
CPNE1-202ENST00000352393 MORC3Q14149 939 aa28.11■■■□□ 2.09
CPNE1-202ENST00000352393 TRIM22Q8IYM9 498 aa28.11■■■□□ 2.09
CPNE1-202ENST00000352393 ZNF579Q8NAF0 562 aaKnown RBP28.11■■■□□ 2.09
CPNE1-202ENST00000352393 MLKLQ8NB16 471 aa28.11■■■□□ 2.09
CPNE1-202ENST00000352393 BMS1Q14692 1282 aaKnown RBP28.1■■■□□ 2.09
CPNE1-202ENST00000352393 MFSD6Q6ZSS7 791 aa28.1■■■□□ 2.09
CPNE1-202ENST00000352393 HELBQ8NG08 1087 aaPredicted RBP28.1■■■□□ 2.09
CPNE1-202ENST00000352393 ENOX1Q8TC92 643 aaKnown RBP28.1■■■□□ 2.09
CPNE1-202ENST00000352393 SLC4A9Q96Q91 983 aa28.1■■■□□ 2.09
CPNE1-202ENST00000352393 SERTAD1Q9UHV2 236 aa28.1■■■□□ 2.09
CPNE1-202ENST00000352393 SLC5A1P13866 664 aa28.1■■■□□ 2.09
CPNE1-202ENST00000352393 TRIML1Q8N9V2 468 aa28.1■■■□□ 2.09
CPNE1-202ENST00000352393 DACH1Q9UI36 760 aa28.1■■■□□ 2.09
CPNE1-202ENST00000352393 ZBTB1Q9Y2K1 713 aa28.1■■■□□ 2.09
CPNE1-202ENST00000352393 NFE2L3Q9Y4A8 694 aa28.1■■■□□ 2.09
CPNE1-202ENST00000352393 FHOD1Q9Y613 1164 aa28.1■■■□□ 2.09
CPNE1-202ENST00000352393 BAG1Q99933 345 aaPredicted RBP28.09■■■□□ 2.09
CPNE1-202ENST00000352393 MTA3Q9BTC8 594 aa28.09■■■□□ 2.09
CPNE1-202ENST00000352393 PNPLA7Q6ZV29 1317 aa28.09■■■□□ 2.09
CPNE1-202ENST00000352393 POLR2DO15514 142 aaKnown RBP28.09■■■□□ 2.09
CPNE1-202ENST00000352393 DEXIO95424 95 aa28.09■■■□□ 2.09
CPNE1-202ENST00000352393 RCAN1P53805 252 aa28.09■■■□□ 2.09
CPNE1-202ENST00000352393 TC2NQ8N9U0 490 aa28.09■■■□□ 2.09
CPNE1-202ENST00000352393 SMARCE1Q969G3 411 aa28.09■■■□□ 2.09
CPNE1-202ENST00000352393 NOL10Q9BSC4 688 aaKnown RBP28.09■■■□□ 2.09
CPNE1-202ENST00000352393 EVA1CP58658 441 aa28.08■■■□□ 2.09
CPNE1-202ENST00000352393 WTAPQ15007 396 aa28.08■■■□□ 2.09
CPNE1-202ENST00000352393 UBXN4Q92575 508 aa28.08■■■□□ 2.09
CPNE1-202ENST00000352393 PCDHB6Q9Y5E3 794 aa28.08■■■□□ 2.09
CPNE1-202ENST00000352393 BCL9O00512 1426 aa28.08■■■□□ 2.09
CPNE1-202ENST00000352393 GOLGA6L9A6NEM1 432 aa28.07■■■□□ 2.08
CPNE1-202ENST00000352393 ACTN4O43707 911 aaKnown RBP28.07■■■□□ 2.08
CPNE1-202ENST00000352393 PRKAB2O43741 272 aa28.07■■■□□ 2.08
CPNE1-202ENST00000352393 STX10O60499 249 aa28.07■■■□□ 2.08
CPNE1-202ENST00000352393 URI1O94763 535 aaPredicted RBP28.07■■■□□ 2.08
CPNE1-202ENST00000352393 SART3Q15020 963 aaKnown RBP28.07■■■□□ 2.08
CPNE1-202ENST00000352393 SPECC1LQ69YQ0 1117 aa28.07■■■□□ 2.08
CPNE1-202ENST00000352393 CRACR2BQ8N4Y2 399 aaPredicted RBP28.07■■■□□ 2.08
CPNE1-202ENST00000352393 MNS1Q8NEH6 495 aa28.07■■■□□ 2.08
CPNE1-202ENST00000352393 MPHOSPH8Q99549 860 aa28.07■■■□□ 2.08
CPNE1-202ENST00000352393 SRPRBQ9Y5M8 271 aaKnown RBP28.07■■■□□ 2.08
CPNE1-202ENST00000352393 ERVV-1B6SEH8 477 aa28.07■■■□□ 2.08
CPNE1-202ENST00000352393 GNAT2P19087 354 aa28.07■■■□□ 2.08
CPNE1-202ENST00000352393 LCORLQ8N3X6 602 aa28.07■■■□□ 2.08
CPNE1-202ENST00000352393 MED15Q96RN5 788 aa28.07■■■□□ 2.08
CPNE1-202ENST00000352393 COL22A1Q8NFW1 1626 aaPredicted RBP28.06■■■□□ 2.08
CPNE1-202ENST00000352393 EFCAB8A8MWE9 144 aa28.06■■■□□ 2.08
CPNE1-202ENST00000352393 NR5A1Q13285 461 aa28.06■■■□□ 2.08
CPNE1-202ENST00000352393 ZNF827Q17R98 1081 aa28.06■■■□□ 2.08
CPNE1-202ENST00000352393 HSP90AA4PQ58FG1 418 aa28.06■■■□□ 2.08
CPNE1-202ENST00000352393 SPATA20Q8TB22 786 aa28.06■■■□□ 2.08
CPNE1-202ENST00000352393 ZKSCAN3Q9BRR0 538 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms