RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 RASSF10A6NK89 507 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 WDR46O15213 610 aaKnown RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 STAM2O75886 525 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 HSPA9P38646 679 aaKnown RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 NCAPG2Q86XI2 1143 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 RETREG2Q8NC44 543 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 PHAXQ9H814 394 aaKnown RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 LRRIQ3A6PVS8 624 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 PPM1FP49593 454 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 KIFC3Q9BVG8 833 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 SRCIN1Q9C0H9 1055 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 KCNQ3O43525 872 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 SLC4A10Q6U841 1118 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 SPATA21Q7Z572 469 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 ZSCAN31Q96LW9 406 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 CARD8Q9Y2G2 431 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 TMED10P49755 219 aaKnown RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 GRSF1Q12849 480 aaKnown RBP eCLIP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 CPLX4Q7Z7G2 160 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 SLC4A7Q9Y6M7 1214 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 SH3TC1Q8TE82 1336 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 GSTA1P08263 222 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 PSME1Q06323 249 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 MCUR1Q96AQ8 359 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 PCMTD1Q96MG8 357 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 YIPF3Q9GZM5 350 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 DCTPP1Q9H773 170 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 ST13P4Q8IZP2 240 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 SNF8Q96H20 258 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 ARIH1Q9Y4X5 557 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 BCRP11274 1271 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 ATP5JP18859 108 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 TRAP1Q12931 704 aaKnown RBP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 SARM1Q6SZW1 724 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 UBN2Q6ZU65 1347 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 GJA8P48165 433 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 FYB2Q5VWT5 728 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 ALS2CLQ60I27 953 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 KANK3Q6NY19 840 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 CCDC62Q6P9F0 684 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 TRIM58Q8NG06 486 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 STXBP3O00186 592 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 RASGRF2O14827 1237 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 SMARCA1P28370 1054 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 ATP6V1E1P36543 226 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 PDXDC1Q6P996 788 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 PAGR1Q9BTK6 254 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 SELENOOQ9BVL4 669 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 PAPOLBQ9NRJ5 636 aaKnown RBP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 HELLSQ9NRZ9 838 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 FSBPO95073 299 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 UBXN1Q04323 297 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 KRT32Q14532 448 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 STX1AQ16623 288 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 WLSQ5T9L3 541 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 PRR23BQ6ZRT6 265 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 TBCCD1Q9NVR7 557 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 CCDC189A1A4V9 331 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 CLASP2O75122 1294 aaKnown RBP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 SYNCQ9H7C4 482 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 C6orf203Q9P0P8 240 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 TCF3P15923 654 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 ADRM1Q16186 407 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 TNIP2Q8NFZ5 429 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 SGSM3Q96HU1 749 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 KIAA0232Q92628 1395 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 SF3B3Q15393 1217 aaKnown RBP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 PPP1R42Q7Z4L9 355 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 GALNT15Q8N3T1 639 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 N4BP2L2Q92802 583 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 QKIQ96PU8 341 aaKnown RBP eCLIP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 CBFA2T3O75081 653 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 ZNF76P36508 570 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 INTS8Q75QN2 995 aaKnown RBP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 IQCF2Q8IXL9 164 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 LMBR1Q8WVP7 490 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 SNAPC5O75971 98 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 TRIM14Q14142 442 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 GUCY1B2O75343 617 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 WASHC4Q2M389 1173 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 FOXD4L6Q3SYB3 417 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 FOXD4L3Q6VB84 417 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 BARX2Q9UMQ3 279 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-202ENST00000344113 ANKRD62A6NC57 917 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 PM20D2Q8IYS1 436 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 IL1RAPL1Q9NZN1 696 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 GPRASP1Q5JY77 1395 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 CNGB3Q9NQW8 809 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 STK26Q9P289 416 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 PPP4R3AQ6IN85 833 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 RMI1Q9H9A7 625 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 NCOA3Q9Y6Q9 1424 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 DAB1O75553 588 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 KLC3Q6P597 504 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 FSIP1Q8NA03 581 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 PDP2Q9P2J9 529 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 CARMIL1Q5VZK9 1371 aa4.18□□□□□ -1.74
SYNE2-202ENST00000344113 GOLGA8QA0A0J9YX86 632 aa4.17□□□□□ -1.74
SYNE2-202ENST00000344113 GOLGA8OA6NCC3 632 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms