RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 CD99L2Q8TCZ2 262 aa22.48■■□□□ 1.19
CDHR4-201ENST00000343366 IDI2Q9BXS1 227 aa22.48■■□□□ 1.19
CDHR4-201ENST00000343366 AATFQ9NY61 560 aaKnown RBP eCLIP22.48■■□□□ 1.19
CDHR4-201ENST00000343366 GNAT2P19087 354 aa22.47■■□□□ 1.19
CDHR4-201ENST00000343366 ZMYM1Q5SVZ6 1142 aa22.47■■□□□ 1.19
CDHR4-201ENST00000343366 RUFY2Q8WXA3 655 aa22.47■■□□□ 1.19
CDHR4-201ENST00000343366 DIAPH3Q9NSV4 1193 aa22.47■■□□□ 1.19
CDHR4-201ENST00000343366 CASC1Q6TDU7 716 aa22.46■■□□□ 1.19
CDHR4-201ENST00000343366 ADGRA1Q86SQ6 560 aa22.46■■□□□ 1.19
CDHR4-201ENST00000343366 ZNF333Q96JL9 665 aa22.46■■□□□ 1.19
CDHR4-201ENST00000343366 CRNKL1Q9BZJ0 848 aaKnown RBP22.46■■□□□ 1.19
CDHR4-201ENST00000343366 VEZTQ9HBM0 779 aa22.46■■□□□ 1.19
CDHR4-201ENST00000343366 PPP1R12BO60237 982 aaPredicted RBP22.45■■□□□ 1.18
CDHR4-201ENST00000343366 ENTPD3O75355 529 aa22.45■■□□□ 1.18
CDHR4-201ENST00000343366 USP2O75604 605 aaPredicted RBP22.45■■□□□ 1.18
CDHR4-201ENST00000343366 RHBDL3P58872 404 aa22.45■■□□□ 1.18
CDHR4-201ENST00000343366 TEX11Q8IYF3 940 aa22.45■■□□□ 1.18
CDHR4-201ENST00000343366 HOOK2Q96ED9 719 aa22.45■■□□□ 1.18
CDHR4-201ENST00000343366 DDRGK1Q96HY6 314 aa22.45■■□□□ 1.18
CDHR4-201ENST00000343366 RIOK1Q9BRS2 568 aaKnown RBP22.45■■□□□ 1.18
CDHR4-201ENST00000343366 RPAP1Q9BWH6 1393 aaPredicted RBP22.45■■□□□ 1.18
CDHR4-201ENST00000343366 FOCADQ5VW36 1801 aa22.45■■□□□ 1.18
CDHR4-201ENST00000343366 MCMDC2Q4G0Z9 681 aa22.44■■□□□ 1.18
CDHR4-201ENST00000343366 NBPF12Q5TAG4 269 aaPredicted RBP22.44■■□□□ 1.18
CDHR4-201ENST00000343366 MIGA1Q8NAN2 632 aa22.44■■□□□ 1.18
CDHR4-201ENST00000343366 MS4A4AQ96JQ5 239 aa22.44■■□□□ 1.18
CDHR4-201ENST00000343366 EFCC1Q9HA90 598 aa22.44■■□□□ 1.18
CDHR4-201ENST00000343366 ZSWIM8A7E2V4 1837 aa22.43■■□□□ 1.18
CDHR4-201ENST00000343366 CLRN2A0PK11 232 aa22.43■■□□□ 1.18
CDHR4-201ENST00000343366 SP3Q02447 781 aa22.43■■□□□ 1.18
CDHR4-201ENST00000343366 FAM151AQ8WW52 585 aa22.43■■□□□ 1.18
CDHR4-201ENST00000343366 PUS7LQ9H0K6 701 aaKnown RBP22.43■■□□□ 1.18
CDHR4-201ENST00000343366 ATP8A2Q9NTI2 1148 aa22.43■■□□□ 1.18
CDHR4-201ENST00000343366 COL2A1P02458 1487 aaPredicted RBP22.42■■□□□ 1.18
CDHR4-201ENST00000343366 RAD50Q92878 1312 aa22.42■■□□□ 1.18
CDHR4-201ENST00000343366 SH3RF3Q8TEJ3 882 aaPredicted RBP22.42■■□□□ 1.18
CDHR4-201ENST00000343366 OSBP2Q969R2 916 aa22.42■■□□□ 1.18
CDHR4-201ENST00000343366 DHX36Q9H2U1 1008 aaKnown RBP22.42■■□□□ 1.18
CDHR4-201ENST00000343366 CDK5RAP2Q96SN8 1893 aa22.41■■□□□ 1.18
CDHR4-201ENST00000343366 WDHD1O75717 1129 aaPredicted RBP22.41■■□□□ 1.18
CDHR4-201ENST00000343366 MBD4O95243 580 aa22.41■■□□□ 1.18
CDHR4-201ENST00000343366 USP5P45974 858 aa22.41■■□□□ 1.18
CDHR4-201ENST00000343366 SUPT20HL1Q3ZLR7 823 aa22.41■■□□□ 1.18
CDHR4-201ENST00000343366 GIMAP6Q6P9H5 292 aa22.41■■□□□ 1.18
CDHR4-201ENST00000343366 TCP10L2B9ZVM9 353 aa22.4■■□□□ 1.18
CDHR4-201ENST00000343366 GPAA1O43292 621 aa22.4■■□□□ 1.18
CDHR4-201ENST00000343366 DYNLL1P63167 89 aaKnown RBP22.4■■□□□ 1.18
CDHR4-201ENST00000343366 ANKRD13AQ8IZ07 590 aa22.4■■□□□ 1.18
CDHR4-201ENST00000343366 STRBPQ96SI9 672 aaKnown RBP22.4■■□□□ 1.18
CDHR4-201ENST00000343366 TAOK2Q9UL54 1235 aa22.4■■□□□ 1.18
CDHR4-201ENST00000343366 COLQQ9Y215 455 aaPredicted RBP22.4■■□□□ 1.18
CDHR4-201ENST00000343366 EIF5BO60841 1220 aaKnown RBP22.39■■□□□ 1.17
CDHR4-201ENST00000343366 CHMLP26374 656 aa22.39■■□□□ 1.17
CDHR4-201ENST00000343366 IREB2P48200 963 aaKnown RBP22.39■■□□□ 1.17
CDHR4-201ENST00000343366 NMIQ13287 307 aaPredicted RBP22.39■■□□□ 1.17
CDHR4-201ENST00000343366 RASA3Q14644 834 aa22.39■■□□□ 1.17
CDHR4-201ENST00000343366 OTUD7BQ6GQQ9 843 aa22.39■■□□□ 1.17
CDHR4-201ENST00000343366 SKAP1Q86WV1 359 aa22.39■■□□□ 1.17
CDHR4-201ENST00000343366 AMOTL1Q8IY63 956 aa22.39■■□□□ 1.17
CDHR4-201ENST00000343366 LCORLQ8N3X6 602 aa22.39■■□□□ 1.17
CDHR4-201ENST00000343366 TGFBRAP1Q8WUH2 860 aa22.39■■□□□ 1.17
CDHR4-201ENST00000343366 NACAP1Q9BZK3 213 aa22.39■■□□□ 1.17
CDHR4-201ENST00000343366 CDC45O75419 566 aa22.38■■□□□ 1.17
CDHR4-201ENST00000343366 CWC27Q6UX04 472 aaKnown RBP22.38■■□□□ 1.17
CDHR4-201ENST00000343366 OTUD5Q96G74 571 aa22.38■■□□□ 1.17
CDHR4-201ENST00000343366 TEPSINQ96N21 525 aa22.38■■□□□ 1.17
CDHR4-201ENST00000343366 OSBPL5Q9H0X9 879 aaPredicted RBP22.38■■□□□ 1.17
CDHR4-201ENST00000343366 ARMT1Q9H993 441 aa22.38■■□□□ 1.17
CDHR4-201ENST00000343366 FAM198AQ9UFP1 575 aa22.38■■□□□ 1.17
CDHR4-201ENST00000343366 SLC4A4Q9Y6R1 1079 aa22.38■■□□□ 1.17
CDHR4-201ENST00000343366 COL6A3P12111 3177 aa22.38■■□□□ 1.17
CDHR4-201ENST00000343366 ATRNL1Q5VV63 1379 aa22.38■■□□□ 1.17
CDHR4-201ENST00000343366 FLT1P17948 1338 aa22.37■■□□□ 1.17
CDHR4-201ENST00000343366 PATL2C9JE40 543 aaKnown RBP22.37■■□□□ 1.17
CDHR4-201ENST00000343366 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.37■■□□□ 1.17
CDHR4-201ENST00000343366 BRI3BPQ8WY22 251 aa22.37■■□□□ 1.17
CDHR4-201ENST00000343366 FAM227BQ96M60 508 aa22.37■■□□□ 1.17
CDHR4-201ENST00000343366 PTCH2Q9Y6C5 1203 aa22.37■■□□□ 1.17
CDHR4-201ENST00000343366 CCDC171Q6TFL3 1326 aa22.36■■□□□ 1.17
CDHR4-201ENST00000343366 MYH1P12882 1939 aa22.36■■□□□ 1.17
CDHR4-201ENST00000343366 A0A0D9SFI3 127 aa22.36■■□□□ 1.17
CDHR4-201ENST00000343366 M0R2C6 588 aa22.36■■□□□ 1.17
CDHR4-201ENST00000343366 CACNB3P54284 484 aa22.36■■□□□ 1.17
CDHR4-201ENST00000343366 NFIAQ12857 509 aa22.36■■□□□ 1.17
CDHR4-201ENST00000343366 PICALMQ13492 652 aa22.36■■□□□ 1.17
CDHR4-201ENST00000343366 CDAN1Q8IWY9 1227 aa22.36■■□□□ 1.17
CDHR4-201ENST00000343366 OPTNQ96CV9 577 aa22.36■■□□□ 1.17
CDHR4-201ENST00000343366 CHGBP05060 677 aa22.35■■□□□ 1.17
CDHR4-201ENST00000343366 HLA-DOAP06340 250 aa22.35■■□□□ 1.17
CDHR4-201ENST00000343366 TCP10Q12799 353 aa22.35■■□□□ 1.17
CDHR4-201ENST00000343366 SLFNL1Q499Z3 407 aa22.35■■□□□ 1.17
CDHR4-201ENST00000343366 TTC6Q86TZ1 520 aa22.35■■□□□ 1.17
CDHR4-201ENST00000343366 CNKSR2Q8WXI2 1034 aa22.35■■□□□ 1.17
CDHR4-201ENST00000343366 SEC62Q99442 399 aaKnown RBP22.35■■□□□ 1.17
CDHR4-201ENST00000343366 DCP1AQ9NPI6 582 aaPredicted RBP22.35■■□□□ 1.17
CDHR4-201ENST00000343366 NAV1Q8NEY1 1877 aa22.34■■□□□ 1.17
CDHR4-201ENST00000343366 LAMA3Q16787 3333 aa22.34■■□□□ 1.17
CDHR4-201ENST00000343366 DCAF15Q66K64 600 aa22.34■■□□□ 1.17
CDHR4-201ENST00000343366 MAPKAPK5Q8IW41 473 aa22.34■■□□□ 1.17
CDHR4-201ENST00000343366 ZSCAN29Q8IWY8 852 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms