RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ADGRB3O60242 1522 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 LRRC7Q96NW7 1537 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 USP8P40818 1118 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 PLCD1P51178 756 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 LINC00301Q8NCQ3 95 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 FERMT2Q96AC1 680 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 AATFQ9NY61 560 aaKnown RBP eCLIP8.12□□□□□ -1.11
VCAN-202ENST00000342785 SHROOM2Q13796 1616 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 GNPATO15228 680 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 BCAMP50895 628 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 RBM6P78332 1123 aaKnown RBP8.12□□□□□ -1.11
VCAN-202ENST00000342785 PPARAQ07869 468 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 CETN1Q12798 172 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 RESTQ13127 1097 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 C11orf57Q6ZUT1 292 aaPredicted RBP8.12□□□□□ -1.11
VCAN-202ENST00000342785 TUBBP07437 444 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 PRPF4BQ13523 1007 aaKnown RBP8.12□□□□□ -1.11
VCAN-202ENST00000342785 CAPZA3Q96KX2 299 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 CDCA7Q9BWT1 371 aaPredicted RBP8.12□□□□□ -1.11
VCAN-202ENST00000342785 ZBTB1Q9Y2K1 713 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 H7C1W4 665 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 TUBB4BP68371 445 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 ARID5AQ03989 594 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 DPCR1Q3MIW9 517 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 KRBA2Q6ZNG9 492 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 SMAP1Q8IYB5 467 aaPredicted RBP8.11□□□□□ -1.11
VCAN-202ENST00000342785 TEX11Q8IYF3 940 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 TNKSO95271 1327 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 RPS8P62241 208 aaKnown RBP8.11□□□□□ -1.11
VCAN-202ENST00000342785 TAB2Q9NYJ8 693 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 CTNND2Q9UQB3 1225 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 SYNRGQ9UMZ2 1314 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 ARHGEF40Q8TER5 1519 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 MAP3K15Q6ZN16 1313 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 WDHD1O75717 1129 aaPredicted RBP8.11□□□□□ -1.11
VCAN-202ENST00000342785 SSR1P43307 286 aaKnown RBP8.11□□□□□ -1.11
VCAN-202ENST00000342785 IFFO1Q0D2I5 559 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 TIGD1Q96MW7 591 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 POLR3EQ9NVU0 708 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 ZMYM6O95789 1325 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 GYG1P46976 350 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 ADKP55263 362 aaKnown RBP8.11□□□□□ -1.11
VCAN-202ENST00000342785 ST5P78524 1137 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 PDE4DQ08499 809 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 ERCC6LQ2NKX8 1250 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 CSGALNACT2Q8N6G5 542 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 SDR42E1Q8WUS8 393 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 KIF1BO60333 1816 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 TFAP4Q01664 338 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 TOB2Q14106 344 aaPredicted RBP8.11□□□□□ -1.11
VCAN-202ENST00000342785 ZNF622Q969S3 477 aaKnown RBP eCLIP8.11□□□□□ -1.11
VCAN-202ENST00000342785 C8orf37Q96NL8 207 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 PUS7LQ9H0K6 701 aaKnown RBP8.11□□□□□ -1.11
VCAN-202ENST00000342785 ATG3Q9NT62 314 aa8.11□□□□□ -1.11
VCAN-202ENST00000342785 TTF2Q9UNY4 1162 aaKnown RBP8.11□□□□□ -1.11
VCAN-202ENST00000342785 PARP1P09874 1014 aaKnown RBP8.1□□□□□ -1.11
VCAN-202ENST00000342785 NEFHP12036 1026 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 KIF23Q02241 960 aaPredicted RBP8.1□□□□□ -1.11
VCAN-202ENST00000342785 PAK1Q13153 545 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 TMTC1Q8IUR5 882 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 FAM47AQ5JRC9 791 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 CARMIL3Q8ND23 1372 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 GLI2P10070 1586 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 CAPN2P17655 700 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 SLFNL1Q499Z3 407 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 SAP30BPQ9UHR5 308 aaKnown RBP8.1□□□□□ -1.11
VCAN-202ENST00000342785 ABCA6Q8N139 1617 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 USP31Q70CQ4 1352 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 CHMP4BP1P59074 171 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 STXBP4Q6ZWJ1 553 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 MAATS1Q7Z4T9 603 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 NOC4LQ9BVI4 516 aaKnown RBP8.1□□□□□ -1.11
VCAN-202ENST00000342785 CCDC113Q9H0I3 377 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 SV2BQ7L1I2 683 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 SYCP3Q8IZU3 236 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 NEK11Q8NG66 645 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 CARD10Q9BWT7 1032 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 BLZF1Q9H2G9 400 aa8.1□□□□□ -1.11
VCAN-202ENST00000342785 TRAF5O00463 557 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 ARID4AP29374 1257 aaPredicted RBP8.09□□□□□ -1.11
VCAN-202ENST00000342785 LMTK2Q8IWU2 1503 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 CRB1P82279 1406 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 M0R2C6 588 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 CETN2P41208 172 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 TXKP42681 527 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 MRPL12P52815 198 aaKnown RBP8.09□□□□□ -1.11
VCAN-202ENST00000342785 NONOQ15233 471 aaKnown RBP eCLIP8.09□□□□□ -1.11
VCAN-202ENST00000342785 ZFP91Q96JP5 570 aaPredicted RBP8.09□□□□□ -1.11
VCAN-202ENST00000342785 AIFM3Q96NN9 605 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 NAPGQ99747 312 aaPredicted RBP8.09□□□□□ -1.11
VCAN-202ENST00000342785 DESI2Q9BSY9 194 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 BCCIPQ9P287 314 aaKnown RBP eCLIP8.09□□□□□ -1.11
VCAN-202ENST00000342785 WDR17Q8IZU2 1322 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 ALKQ9UM73 1620 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 MACROD2A1Z1Q3 448 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 WDR66Q8TBY9 1149 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 SLF1Q9BQI6 1058 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 WWC3Q9ULE0 1092 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 TRIM14Q14142 442 aa8.09□□□□□ -1.11
VCAN-202ENST00000342785 CNBD1Q8NA66 436 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms