RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 COL4A1P02462 1669 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 ANKRD36CQ5JPF3 1778 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 PATL2C9JE40 543 aaKnown RBP8.37□□□□□ -1.07
PTPRR-202ENST00000342084 FANCGO15287 622 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 SLU7O95391 586 aaKnown RBP8.37□□□□□ -1.07
PTPRR-202ENST00000342084 FMNL1O95466 1100 aaPredicted RBP8.37□□□□□ -1.07
PTPRR-202ENST00000342084 UQCRFS1P1P0C7P4 283 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 SYCP1Q15431 976 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 USP49Q70CQ1 688 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 ADGRA1Q86SQ6 560 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 SDR42E1Q8WUS8 393 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 INTS13Q9NVM9 706 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 SERTAD1Q9UHV2 236 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 PCDHB6Q9Y5E3 794 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 SLC4A4Q9Y6R1 1079 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 MYH3P11055 1940 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 LRP5O75197 1615 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 IKBKBO14920 756 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 CUTAO60888 179 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 MMP1P03956 469 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 SLC5A1P13866 664 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 FMR1Q06787 632 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTPRR-202ENST00000342084 MAP3K12Q12852 859 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 RTN1Q16799 776 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 ERCC6LQ2NKX8 1250 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 AKNAD1Q5T1N1 836 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 SGMS1Q86VZ5 419 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 HOMER1Q86YM7 354 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 NOSTRINQ8IVI9 506 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 FAM177A1Q8N128 213 aaPredicted RBP8.37□□□□□ -1.07
PTPRR-202ENST00000342084 JMYQ8N9B5 988 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 SHISA4Q96DD7 197 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 ERO1AQ96HE7 468 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 TIGD1Q96MW7 591 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 MAN1B1Q9UKM7 699 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 BCL9O00512 1426 aa8.37□□□□□ -1.07
PTPRR-202ENST00000342084 NUP98P52948 1817 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 CYP2D7A0A087X1C5 515 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 MINDY4BA8MYZ0 360 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 POLR2DO15514 142 aaKnown RBP8.36□□□□□ -1.07
PTPRR-202ENST00000342084 PRDM1O75626 825 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 CASP1P29466 404 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 EVX2Q03828 476 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 WTAPQ15007 396 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 OLFM4Q6UX06 510 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 MFSD6Q6ZSS7 791 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 KRI1Q8N9T8 703 aaKnown RBP8.36□□□□□ -1.07
PTPRR-202ENST00000342084 ZNF397Q8NF99 534 aaPredicted RBP8.36□□□□□ -1.07
PTPRR-202ENST00000342084 UTP14AQ9BVJ6 771 aaKnown RBP8.36□□□□□ -1.07
PTPRR-202ENST00000342084 ST7Q9NRC1 585 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 OGFRQ9NZT2 677 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 DNAI1Q9UI46 699 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 DDX41Q9UJV9 622 aaKnown RBP8.36□□□□□ -1.07
PTPRR-202ENST00000342084 FBXO2Q9UK22 296 aaPredicted RBP8.36□□□□□ -1.07
PTPRR-202ENST00000342084 PSDA5PKW4 1024 aaPredicted RBP8.36□□□□□ -1.07
PTPRR-202ENST00000342084 TOP1P11387 765 aaKnown RBP8.36□□□□□ -1.07
PTPRR-202ENST00000342084 IFNAR1P17181 557 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 LIFRP42702 1097 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 NOM1Q5C9Z4 860 aaKnown RBP8.36□□□□□ -1.07
PTPRR-202ENST00000342084 EARS2Q5JPH6 523 aaKnown RBP8.36□□□□□ -1.07
PTPRR-202ENST00000342084 VSTM4Q8IW00 320 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 ZNF34Q8IZ26 560 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 ACSBG1Q96GR2 724 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 MED15Q96RN5 788 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 MPHOSPH8Q99549 860 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 CABP5Q9NP86 173 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 KCND1Q9NSA2 647 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 ZNF446Q9NWS9 450 aa8.36□□□□□ -1.07
PTPRR-202ENST00000342084 MROH5Q6ZUA9 1318 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 CHD4Q14839 1912 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 FAM237AA0A1B0GTK4 181 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 WNT7AO00755 349 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 COBLO75128 1261 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 MDM2Q00987 491 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-202ENST00000342084 POSTNQ15063 836 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 ALX1Q15699 326 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 PLCH1Q4KWH8 1693 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 TIAM2Q8IVF5 1701 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 STAG1Q8WVM7 1258 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 ARAP2Q8WZ64 1704 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 FEZ1Q99689 392 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 EPC1Q9H2F5 836 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.35□□□□□ -1.07
PTPRR-202ENST00000342084 STK36Q9NRP7 1315 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 SAMSN1Q9NSI8 373 aaKnown RBP8.35□□□□□ -1.07
PTPRR-202ENST00000342084 VPS54Q9P1Q0 977 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 LRP2BPQ9P2M1 347 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 ABCF2Q9UG63 623 aa8.35□□□□□ -1.07
PTPRR-202ENST00000342084 DOCK2Q92608 1830 aa8.34□□□□□ -1.07
PTPRR-202ENST00000342084 A0A087X0B3 334 aa8.34□□□□□ -1.07
PTPRR-202ENST00000342084 ECM2O94769 699 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-202ENST00000342084 CYP7A1P22680 504 aa8.34□□□□□ -1.07
PTPRR-202ENST00000342084 GYG1P46976 350 aa8.34□□□□□ -1.07
PTPRR-202ENST00000342084 ADKP55263 362 aaKnown RBP8.34□□□□□ -1.07
PTPRR-202ENST00000342084 DYNLL1P63167 89 aaKnown RBP8.34□□□□□ -1.07
PTPRR-202ENST00000342084 SAFBQ15424 915 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTPRR-202ENST00000342084 SMIM5Q71RC9 77 aa8.34□□□□□ -1.07
PTPRR-202ENST00000342084 ZNF654Q8IZM8 581 aa8.34□□□□□ -1.07
PTPRR-202ENST00000342084 CRACR2BQ8N4Y2 399 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-202ENST00000342084 KRT23Q9C075 422 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms