RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 NECAB1Q8N987 351 aa16.43■□□□□ 0.22
PMS1-201ENST00000342075 EPS15P42566 896 aa16.43■□□□□ 0.22
PMS1-201ENST00000342075 HDLBPQ00341 1268 aaKnown RBP16.43■□□□□ 0.22
PMS1-201ENST00000342075 APOBRQ0VD83 1088 aa16.43■□□□□ 0.22
PMS1-201ENST00000342075 BECN1Q14457 450 aa16.43■□□□□ 0.22
PMS1-201ENST00000342075 TMED8Q6PL24 325 aaPredicted RBP16.43■□□□□ 0.22
PMS1-201ENST00000342075 OSBPL5Q9H0X9 879 aaPredicted RBP16.43■□□□□ 0.22
PMS1-201ENST00000342075 HDAC9Q9UKV0 1011 aa16.43■□□□□ 0.22
PMS1-201ENST00000342075 SIPA1L1O43166 1804 aa16.43■□□□□ 0.22
PMS1-201ENST00000342075 ST3GAL1Q11201 340 aa16.42■□□□□ 0.22
PMS1-201ENST00000342075 SHROOM1Q2M3G4 852 aaPredicted RBP16.42■□□□□ 0.22
PMS1-201ENST00000342075 TRPM4Q8TD43 1214 aa16.42■□□□□ 0.22
PMS1-201ENST00000342075 ANAPC4Q9UJX5 808 aa16.42■□□□□ 0.22
PMS1-201ENST00000342075 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
PMS1-201ENST00000342075 ME3Q16798 604 aa16.42■□□□□ 0.22
PMS1-201ENST00000342075 MRIQ9BWK5 157 aa16.42■□□□□ 0.22
PMS1-201ENST00000342075 ZNF70Q9UC06 446 aaPredicted RBP16.42■□□□□ 0.22
PMS1-201ENST00000342075 FGD1P98174 961 aa16.41■□□□□ 0.22
PMS1-201ENST00000342075 CHMP4CQ96CF2 233 aa16.41■□□□□ 0.22
PMS1-201ENST00000342075 DAXXQ9UER7 740 aaPredicted RBP16.41■□□□□ 0.22
PMS1-201ENST00000342075 TRDNQ13061 729 aa16.41■□□□□ 0.22
PMS1-201ENST00000342075 SBK1Q52WX2 424 aa16.41■□□□□ 0.22
PMS1-201ENST00000342075 NAP1L2Q9ULW6 460 aaPredicted RBP16.41■□□□□ 0.22
PMS1-201ENST00000342075 RXRAP19793 462 aa16.4■□□□□ 0.22
PMS1-201ENST00000342075 ZSCAN29Q8IWY8 852 aaPredicted RBP16.4■□□□□ 0.22
PMS1-201ENST00000342075 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.4■□□□□ 0.22
PMS1-201ENST00000342075 IGSF3O75054 1194 aa16.4■□□□□ 0.22
PMS1-201ENST00000342075 MCM5P33992 734 aa16.4■□□□□ 0.22
PMS1-201ENST00000342075 DLK2Q6UY11 383 aa16.4■□□□□ 0.22
PMS1-201ENST00000342075 TMEM39BQ9GZU3 492 aa16.4■□□□□ 0.22
PMS1-201ENST00000342075 ZBED3Q96IU2 234 aaPredicted RBP16.4■□□□□ 0.22
PMS1-201ENST00000342075 MYL10Q9BUA6 226 aa16.4■□□□□ 0.22
PMS1-201ENST00000342075 DNAJC18Q9H819 358 aa16.4■□□□□ 0.22
PMS1-201ENST00000342075 BRPF3Q9ULD4 1205 aa16.4■□□□□ 0.22
PMS1-201ENST00000342075 ZNF280AP59817 542 aaPredicted RBP16.39■□□□□ 0.21
PMS1-201ENST00000342075 CLEC10AQ8IUN9 316 aa16.39■□□□□ 0.21
PMS1-201ENST00000342075 GPC2Q8N158 579 aa16.39■□□□□ 0.21
PMS1-201ENST00000342075 CNTNAP1P78357 1384 aa16.39■□□□□ 0.21
PMS1-201ENST00000342075 SPDYE2Q495Y8 402 aa16.39■□□□□ 0.21
PMS1-201ENST00000342075 GPRC5DQ9NZD1 345 aa16.39■□□□□ 0.21
PMS1-201ENST00000342075 POLR2AP24928 1970 aaKnown RBP16.39■□□□□ 0.21
PMS1-201ENST00000342075 HIRAP54198 1017 aaPredicted RBP16.38■□□□□ 0.21
PMS1-201ENST00000342075 PRAMEF18Q5VWM3 479 aa16.38■□□□□ 0.21
PMS1-201ENST00000342075 CCDC83Q8IWF9 413 aa16.38■□□□□ 0.21
PMS1-201ENST00000342075 IDI2Q9BXS1 227 aa16.38■□□□□ 0.21
PMS1-201ENST00000342075 NCOA5Q9HCD5 579 aaKnown RBP16.38■□□□□ 0.21
PMS1-201ENST00000342075 LIMCH1Q9UPQ0 1083 aa16.38■□□□□ 0.21
PMS1-201ENST00000342075 CDK8P49336 464 aa16.38■□□□□ 0.21
PMS1-201ENST00000342075 KIF4BQ2VIQ3 1234 aa16.38■□□□□ 0.21
PMS1-201ENST00000342075 CCDC144CPQ8IYA2 1237 aa16.38■□□□□ 0.21
PMS1-201ENST00000342075 MYH8P13535 1937 aa16.38■□□□□ 0.21
PMS1-201ENST00000342075 HSP90AA1P07900 732 aaKnown RBP16.37■□□□□ 0.21
PMS1-201ENST00000342075 HMGB1P09429 215 aaKnown RBP16.37■□□□□ 0.21
PMS1-201ENST00000342075 RPS12P25398 132 aaKnown RBP16.37■□□□□ 0.21
PMS1-201ENST00000342075 CCT2P78371 535 aaKnown RBP16.37■□□□□ 0.21
PMS1-201ENST00000342075 CERS3Q8IU89 383 aa16.37■□□□□ 0.21
PMS1-201ENST00000342075 IGDCC4Q8TDY8 1250 aa16.37■□□□□ 0.21
PMS1-201ENST00000342075 DPF2Q92785 391 aa16.37■□□□□ 0.21
PMS1-201ENST00000342075 MKNK2Q9HBH9 465 aa16.37■□□□□ 0.21
PMS1-201ENST00000342075 ROBO3Q96MS0 1386 aa16.37■□□□□ 0.21
PMS1-201ENST00000342075 IFIT3O14879 490 aaKnown RBP16.37■□□□□ 0.21
PMS1-201ENST00000342075 FGRP09769 529 aa16.37■□□□□ 0.21
PMS1-201ENST00000342075 RASA1P20936 1047 aa16.37■□□□□ 0.21
PMS1-201ENST00000342075 KRT23Q9C075 422 aa16.37■□□□□ 0.21
PMS1-201ENST00000342075 RNF41Q9H4P4 317 aaPredicted RBP16.37■□□□□ 0.21
PMS1-201ENST00000342075 LY9Q9HBG7 655 aa16.37■□□□□ 0.21
PMS1-201ENST00000342075 SH2B2O14492 632 aaPredicted RBP16.36■□□□□ 0.21
PMS1-201ENST00000342075 TMEM67Q5HYA8 995 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 C16orf86Q6ZW13 317 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 AMOTL1Q8IY63 956 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 CNNM2Q9H8M5 875 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 HACL1Q9UJ83 578 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 FZD1Q9UP38 647 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 TNKSO95271 1327 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 TSPY2A6NKD2 308 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 TFAP4Q01664 338 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 PDE4BQ07343 736 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 RASGRP2Q7LDG7 609 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 ESR2Q92731 530 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 AGXT2Q9BYV1 514 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 IL17RBQ9NRM6 502 aa16.36■□□□□ 0.21
PMS1-201ENST00000342075 KLF18A0A0U1RQI7 1052 aa16.35■□□□□ 0.21
PMS1-201ENST00000342075 GABPAQ06546 454 aa16.35■□□□□ 0.21
PMS1-201ENST00000342075 ENAHQ8N8S7 591 aaPredicted RBP16.35■□□□□ 0.21
PMS1-201ENST00000342075 MTMR14Q8NCE2 650 aa16.35■□□□□ 0.21
PMS1-201ENST00000342075 CSRNP1Q96S65 589 aa16.35■□□□□ 0.21
PMS1-201ENST00000342075 SERPINB13Q9UIV8 391 aa16.35■□□□□ 0.21
PMS1-201ENST00000342075 MIGA2Q7L4E1 593 aa16.35■□□□□ 0.21
PMS1-201ENST00000342075 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.35■□□□□ 0.21
PMS1-201ENST00000342075 ORC4O43929 436 aa16.35■□□□□ 0.21
PMS1-201ENST00000342075 SHMT1P34896 483 aa16.35■□□□□ 0.21
PMS1-201ENST00000342075 SCRN1Q12765 414 aa16.35■□□□□ 0.21
PMS1-201ENST00000342075 RRP1BQ14684 758 aaKnown RBP16.35■□□□□ 0.21
PMS1-201ENST00000342075 ANGEL2Q5VTE6 544 aaKnown RBP16.35■□□□□ 0.21
PMS1-201ENST00000342075 TMOD2Q9NZR1 351 aa16.35■□□□□ 0.21
PMS1-201ENST00000342075 ANGEL1Q9UNK9 670 aaKnown RBP16.35■□□□□ 0.21
PMS1-201ENST00000342075 H7C1D1 291 aa16.34■□□□□ 0.21
PMS1-201ENST00000342075 AKR1B1P15121 316 aa16.34■□□□□ 0.21
PMS1-201ENST00000342075 PKP1Q13835 747 aa16.34■□□□□ 0.21
PMS1-201ENST00000342075 MTMR7Q9Y216 660 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms