RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 AGTPBP1Q9UPW5 1226 aa16.02■□□□□ 0.16
NECTIN1-203ENST00000341398 COL2A1P02458 1487 aaPredicted RBP16.01■□□□□ 0.15
NECTIN1-203ENST00000341398 TNPO2O14787 897 aaKnown RBP16.01■□□□□ 0.15
NECTIN1-203ENST00000341398 SURF6O75683 361 aaKnown RBP16.01■□□□□ 0.15
NECTIN1-203ENST00000341398 GJB1P08034 283 aa16.01■□□□□ 0.15
NECTIN1-203ENST00000341398 PRKCZQ05513 592 aa16.01■□□□□ 0.15
NECTIN1-203ENST00000341398 ZNF280CQ8ND82 737 aa16.01■□□□□ 0.15
NECTIN1-203ENST00000341398 ZNF384Q8TF68 577 aa16.01■□□□□ 0.15
NECTIN1-203ENST00000341398 COA7Q96BR5 231 aa16.01■□□□□ 0.15
NECTIN1-203ENST00000341398 PI4KBQ9UBF8 816 aa16.01■□□□□ 0.15
NECTIN1-203ENST00000341398 TNNQ9UQP3 1299 aa16.01■□□□□ 0.15
NECTIN1-203ENST00000341398 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.01■□□□□ 0.15
NECTIN1-203ENST00000341398 USP17L5A8MUK1 530 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 ADCY3O60266 1144 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 CCL5P13501 91 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 CAP2P40123 477 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 SPP2Q13103 211 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 POLA2Q14181 598 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 TNNI3KQ59H18 835 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 SSH3Q8TE77 659 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 DPF3Q92784 378 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 TRIM34Q9BYJ4 488 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 FPGT-TNNI3KV9GXZ4 949 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 ATAD5Q96QE3 1844 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 BRCA2P51587 3418 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 DOCK3Q8IZD9 2030 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 GJA8P48165 433 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 GCLCP48506 637 aaPredicted RBP16■□□□□ 0.15
NECTIN1-203ENST00000341398 FOXP4Q8IVH2 680 aaPredicted RBP16■□□□□ 0.15
NECTIN1-203ENST00000341398 PXYLP1Q8TE99 480 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 HTATIP2Q9BUP3 242 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 SNRKQ9NRH2 765 aa16■□□□□ 0.15
NECTIN1-203ENST00000341398 AATFQ9NY61 560 aaKnown RBP eCLIP16■□□□□ 0.15
NECTIN1-203ENST00000341398 FAM196BA6NMK8 535 aa15.99■□□□□ 0.15
NECTIN1-203ENST00000341398 SLURP2P0DP57 97 aa15.99■□□□□ 0.15
NECTIN1-203ENST00000341398 FLT3LGP49771 235 aa15.99■□□□□ 0.15
NECTIN1-203ENST00000341398 PPP4CP60510 307 aa15.99■□□□□ 0.15
NECTIN1-203ENST00000341398 HNRNPUQ00839 825 aaKnown RBP eCLIP15.99■□□□□ 0.15
NECTIN1-203ENST00000341398 IRF5Q13568 498 aa15.99■□□□□ 0.15
NECTIN1-203ENST00000341398 CRACR2BQ8N4Y2 399 aaPredicted RBP15.99■□□□□ 0.15
NECTIN1-203ENST00000341398 ANKRD13CQ8N6S4 541 aa15.99■□□□□ 0.15
NECTIN1-203ENST00000341398 SH3RF3Q8TEJ3 882 aaPredicted RBP15.99■□□□□ 0.15
NECTIN1-203ENST00000341398 ZNF512BQ96KM6 892 aaPredicted RBP15.99■□□□□ 0.15
NECTIN1-203ENST00000341398 GABRQQ9UN88 632 aa15.99■□□□□ 0.15
NECTIN1-203ENST00000341398 ASNSP08243 561 aa15.98■□□□□ 0.15
NECTIN1-203ENST00000341398 FAM110CQ1W6H9 321 aa15.98■□□□□ 0.15
NECTIN1-203ENST00000341398 CCDC84Q86UT8 332 aaPredicted RBP15.98■□□□□ 0.15
NECTIN1-203ENST00000341398 CERS3Q8IU89 383 aa15.98■□□□□ 0.15
NECTIN1-203ENST00000341398 ITPRIPQ8IWB1 547 aa15.98■□□□□ 0.15
NECTIN1-203ENST00000341398 TGFBRAP1Q8WUH2 860 aa15.98■□□□□ 0.15
NECTIN1-203ENST00000341398 DBNDD2Q9BQY9 259 aa15.98■□□□□ 0.15
NECTIN1-203ENST00000341398 GINM1Q9NU53 330 aa15.98■□□□□ 0.15
NECTIN1-203ENST00000341398 HMGCS2P54868 508 aa15.97■□□□□ 0.15
NECTIN1-203ENST00000341398 TREML2Q5T2D2 321 aa15.97■□□□□ 0.15
NECTIN1-203ENST00000341398 TMOD4Q9NZQ9 345 aa15.97■□□□□ 0.15
NECTIN1-203ENST00000341398 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.97■□□□□ 0.15
NECTIN1-203ENST00000341398 TAOK2Q9UL54 1235 aa15.97■□□□□ 0.15
NECTIN1-203ENST00000341398 NOP58Q9Y2X3 529 aaKnown RBP15.97■□□□□ 0.15
NECTIN1-203ENST00000341398 SGPL1O95470 568 aa15.96■□□□□ 0.15
NECTIN1-203ENST00000341398 CYP2E1P05181 493 aaPredicted RBP15.96■□□□□ 0.15
NECTIN1-203ENST00000341398 HLA-DOAP06340 250 aa15.96■□□□□ 0.15
NECTIN1-203ENST00000341398 SH3D19Q5HYK7 790 aa15.96■□□□□ 0.15
NECTIN1-203ENST00000341398 U2AF1L4Q8WU68 220 aaKnown RBP15.96■□□□□ 0.15
NECTIN1-203ENST00000341398 SHISA4Q96DD7 197 aa15.96■□□□□ 0.15
NECTIN1-203ENST00000341398 WDR18Q9BV38 432 aa15.96■□□□□ 0.15
NECTIN1-203ENST00000341398 NR2E3Q9Y5X4 410 aa15.96■□□□□ 0.15
NECTIN1-203ENST00000341398 MYO5AQ9Y4I1 1855 aaKnown RBP15.95■□□□□ 0.14
NECTIN1-203ENST00000341398 C19orf81C9J6K1 198 aa15.95■□□□□ 0.14
NECTIN1-203ENST00000341398 H0YGN5 161 aa15.95■□□□□ 0.14
NECTIN1-203ENST00000341398 ZBTB7BO15156 539 aaPredicted RBP15.95■□□□□ 0.14
NECTIN1-203ENST00000341398 TFRCP02786 760 aaKnown RBP15.95■□□□□ 0.14
NECTIN1-203ENST00000341398 ZAP70P43403 619 aa15.95■□□□□ 0.14
NECTIN1-203ENST00000341398 IRX3P78415 501 aaPredicted RBP15.95■□□□□ 0.14
NECTIN1-203ENST00000341398 TMED8Q6PL24 325 aaPredicted RBP15.95■□□□□ 0.14
NECTIN1-203ENST00000341398 MAPKAPK5Q8IW41 473 aa15.95■□□□□ 0.14
NECTIN1-203ENST00000341398 UNC93B1Q9H1C4 597 aa15.95■□□□□ 0.14
NECTIN1-203ENST00000341398 C1orf115Q9H7X2 142 aa15.95■□□□□ 0.14
NECTIN1-203ENST00000341398 COLQQ9Y215 455 aaPredicted RBP15.95■□□□□ 0.14
NECTIN1-203ENST00000341398 MAST2Q6P0Q8 1798 aa15.95■□□□□ 0.14
NECTIN1-203ENST00000341398 CEP290O15078 2479 aa15.94■□□□□ 0.14
NECTIN1-203ENST00000341398 CDK5RAP2Q96SN8 1893 aa15.94■□□□□ 0.14
NECTIN1-203ENST00000341398 INHAP05111 366 aa15.94■□□□□ 0.14
NECTIN1-203ENST00000341398 ELNP15502 786 aa15.94■□□□□ 0.14
NECTIN1-203ENST00000341398 CYP7A1P22680 504 aa15.94■□□□□ 0.14
NECTIN1-203ENST00000341398 BACE1P56817 501 aa15.94■□□□□ 0.14
NECTIN1-203ENST00000341398 ERC1Q8IUD2 1116 aa15.94■□□□□ 0.14
NECTIN1-203ENST00000341398 CCDC8Q9H0W5 538 aaPredicted RBP15.94■□□□□ 0.14
NECTIN1-203ENST00000341398 ASCC2Q9H1I8 757 aaPredicted RBP15.94■□□□□ 0.14
NECTIN1-203ENST00000341398 LOC285556D6RIA3 1793 aa15.94■□□□□ 0.14
NECTIN1-203ENST00000341398 FOCADQ5VW36 1801 aa15.94■□□□□ 0.14
NECTIN1-203ENST00000341398 USP17L10C9JJH3 530 aa15.93■□□□□ 0.14
NECTIN1-203ENST00000341398 IDH1O75874 414 aaKnown RBP15.93■□□□□ 0.14
NECTIN1-203ENST00000341398 FARP2O94887 1054 aaPredicted RBP15.93■□□□□ 0.14
NECTIN1-203ENST00000341398 MS4A1P11836 297 aa15.93■□□□□ 0.14
NECTIN1-203ENST00000341398 HSP90AB4PQ58FF6 505 aa15.93■□□□□ 0.14
NECTIN1-203ENST00000341398 METTL16Q86W50 562 aaKnown RBP15.93■□□□□ 0.14
NECTIN1-203ENST00000341398 PALD1Q9ULE6 856 aa15.93■□□□□ 0.14
NECTIN1-203ENST00000341398 FLT1P17948 1338 aa15.93■□□□□ 0.14
NECTIN1-203ENST00000341398 MYH1P12882 1939 aa15.93■□□□□ 0.14
NECTIN1-203ENST00000341398 SZT2Q5T011 3432 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms