RNA–Protein interactions for RNA: ENST00000340898.6

RNFT1P3-201, Transcript of ring finger protein, transmembrane 1 pseudogene 3, humanhuman

BASIC

Gene RNFT1P3, Length 1,052 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1P3-201ENST00000340898 PTSQ03393 145 aa8.14□□□□□ -1.11
RNFT1P3-201ENST00000340898 RIPOR1Q6ZS17 1223 aa8.14□□□□□ -1.11
RNFT1P3-201ENST00000340898 SNX29Q8TEQ0 813 aa8.14□□□□□ -1.11
RNFT1P3-201ENST00000340898 DCAF5Q96JK2 942 aa8.14□□□□□ -1.11
RNFT1P3-201ENST00000340898 PHACTR3Q96KR7 559 aa8.14□□□□□ -1.11
RNFT1P3-201ENST00000340898 GPAMQ9HCL2 828 aa8.14□□□□□ -1.11
RNFT1P3-201ENST00000340898 TFCP2L1Q9NZI6 479 aa8.14□□□□□ -1.11
RNFT1P3-201ENST00000340898 GMPR2Q9P2T1 348 aaKnown RBP8.14□□□□□ -1.11
RNFT1P3-201ENST00000340898 LOC102724428A0A0B4J2F2 783 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 SOBPA7XYQ1 873 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 GIPC1O14908 333 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 PHACTR2O75167 634 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 EIF4BP23588 611 aaKnown RBP8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 SIK1P57059 783 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 CABP4P57796 275 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 AKAP4Q5JQC9 854 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 NLRP8Q86W28 1048 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 SMARCC1Q92922 1105 aaPredicted RBP8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 RNF34Q969K3 372 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 CEP63Q96MT8 703 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 MTFR1LQ9H019 292 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 ELP3Q9H9T3 547 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 USP20Q9Y2K6 914 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 C5P01031 1676 aa8.13□□□□□ -1.11
RNFT1P3-201ENST00000340898 SCN11AQ9UI33 1791 aa8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 QSER1Q2KHR3 1735 aa8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 PLEKHG2Q9H7P9 1386 aa8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 RNMTO43148 476 aaKnown RBP8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 HSP90AB1P08238 724 aaKnown RBP8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 SLC39A6Q13433 755 aa8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 LBRQ14739 615 aaKnown RBP8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 C1orf141Q5JVX7 400 aa8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 C9orf131Q5VYM1 1079 aa8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 IL17REQ8NFR9 667 aa8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 CRISPLD1Q9H336 500 aa8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 RUBCNLQ9H714 662 aa8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 ZFYVE28Q9HCC9 887 aa8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 C11orf16Q9NQ32 467 aa8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 FOXD3Q9UJU5 478 aaPredicted RBP8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 KCNMB2Q9Y691 235 aa8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 VIRMAQ69YN4 1812 aaKnown RBP8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 C4BP0C0L5 1744 aa8.12□□□□□ -1.11
RNFT1P3-201ENST00000340898 SLC35F4A4IF30 521 aa8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 XYLBO75191 536 aa8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 ZNF76P36508 570 aa8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 TYRO3Q06418 890 aa8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 TRIP4Q15650 581 aaPredicted RBP8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 NAALADL2Q58DX5 795 aa8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 MSL1Q68DK7 614 aa8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 FIGNL1Q6PIW4 674 aa8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 CCDC74AQ96AQ1 378 aa8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 CRELD1Q96HD1 420 aa8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 PPP1R1BQ9UD71 204 aaPredicted RBP8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 COL24A1Q17RW2 1714 aa8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 UBR3Q6ZT12 1888 aa8.11□□□□□ -1.11
RNFT1P3-201ENST00000340898 MYH14Q7Z406 1995 aaKnown RBP8.1□□□□□ -1.11
RNFT1P3-201ENST00000340898 PRKAR2BP31323 418 aa8.1□□□□□ -1.11
RNFT1P3-201ENST00000340898 FANCCQ00597 558 aa8.1□□□□□ -1.11
RNFT1P3-201ENST00000340898 NT5DC4Q86YG4 428 aa8.1□□□□□ -1.11
RNFT1P3-201ENST00000340898 CCDC155Q8N6L0 562 aa8.1□□□□□ -1.11
RNFT1P3-201ENST00000340898 SLC16A10Q8TF71 515 aa8.1□□□□□ -1.11
RNFT1P3-201ENST00000340898 SREK1Q8WXA9 508 aaKnown RBP8.1□□□□□ -1.11
RNFT1P3-201ENST00000340898 PMEPA1Q969W9 287 aa8.1□□□□□ -1.11
RNFT1P3-201ENST00000340898 GMCL1Q96IK5 515 aa8.1□□□□□ -1.11
RNFT1P3-201ENST00000340898 DRC1Q96MC2 740 aa8.1□□□□□ -1.11
RNFT1P3-201ENST00000340898 SYT17Q9BSW7 474 aa8.1□□□□□ -1.11
RNFT1P3-201ENST00000340898 SLC52A2Q9HAB3 445 aa8.1□□□□□ -1.11
RNFT1P3-201ENST00000340898 ADAMTS7Q9UKP4 1686 aa8.09□□□□□ -1.11
RNFT1P3-201ENST00000340898 SENP3-EIF4A1A0A087X0R7 540 aa8.09□□□□□ -1.11
RNFT1P3-201ENST00000340898 EGFRP00533 1210 aa8.09□□□□□ -1.11
RNFT1P3-201ENST00000340898 U2AF1L5P0DN76 240 aaPredicted RBP8.09□□□□□ -1.11
RNFT1P3-201ENST00000340898 U2AF1Q01081 240 aaKnown RBP eCLIP8.09□□□□□ -1.11
RNFT1P3-201ENST00000340898 SAMD5Q5TGI4 173 aa8.09□□□□□ -1.11
RNFT1P3-201ENST00000340898 USPL1Q5W0Q7 1092 aa8.09□□□□□ -1.11
RNFT1P3-201ENST00000340898 CFAP53Q96M91 514 aa8.09□□□□□ -1.11
RNFT1P3-201ENST00000340898 BRD7Q9NPI1 651 aa8.09□□□□□ -1.11
RNFT1P3-201ENST00000340898 TMEM63CQ9P1W3 806 aa8.09□□□□□ -1.11
RNFT1P3-201ENST00000340898 KCNQ3O43525 872 aa8.08□□□□□ -1.12
RNFT1P3-201ENST00000340898 SNRPBP14678 240 aaKnown RBP8.08□□□□□ -1.12
RNFT1P3-201ENST00000340898 DCTN1Q14203 1278 aa8.08□□□□□ -1.12
RNFT1P3-201ENST00000340898 TTC39BQ5VTQ0 682 aaPredicted RBP8.08□□□□□ -1.12
RNFT1P3-201ENST00000340898 METTL16Q86W50 562 aaKnown RBP8.08□□□□□ -1.12
RNFT1P3-201ENST00000340898 DNAJC10Q8IXB1 793 aa8.08□□□□□ -1.12
RNFT1P3-201ENST00000340898 EPS8L3Q8TE67 593 aaKnown RBP8.08□□□□□ -1.12
RNFT1P3-201ENST00000340898 NUCKS1Q9H1E3 243 aaKnown RBP8.08□□□□□ -1.12
RNFT1P3-201ENST00000340898 C12orf49Q9H741 205 aa8.08□□□□□ -1.12
RNFT1P3-201ENST00000340898 ABI2Q9NYB9 513 aaPredicted RBP8.08□□□□□ -1.12
RNFT1P3-201ENST00000340898 COL5A3P25940 1745 aaPredicted RBP8.08□□□□□ -1.12
RNFT1P3-201ENST00000340898 TJP1Q07157 1748 aa8.07□□□□□ -1.12
RNFT1P3-201ENST00000340898 GNAT3A8MTJ3 354 aa8.07□□□□□ -1.12
RNFT1P3-201ENST00000340898 SF3A1Q15459 793 aaKnown RBP8.07□□□□□ -1.12
RNFT1P3-201ENST00000340898 INTS5Q6P9B9 1019 aaKnown RBP8.07□□□□□ -1.12
RNFT1P3-201ENST00000340898 FOXR1Q6PIV2 292 aa8.07□□□□□ -1.12
RNFT1P3-201ENST00000340898 TRIM22Q8IYM9 498 aa8.07□□□□□ -1.12
RNFT1P3-201ENST00000340898 NLGN2Q8NFZ4 835 aa8.07□□□□□ -1.12
RNFT1P3-201ENST00000340898 PLEKHF1Q96S99 279 aa8.07□□□□□ -1.12
RNFT1P3-201ENST00000340898 ZCCHC2Q9C0B9 1178 aaKnown RBP8.07□□□□□ -1.12
RNFT1P3-201ENST00000340898 SRCIN1Q9C0H9 1055 aa8.07□□□□□ -1.12
RNFT1P3-201ENST00000340898 TGIF2Q9GZN2 237 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms