RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 LY9Q9HBG7 655 aa23.65■■□□□ 1.38
CLPB-202ENST00000340729 TOGARAM1Q9Y4F4 1720 aa23.65■■□□□ 1.38
CLPB-202ENST00000340729 A0A0U1RQG5 324 aaPredicted RBP23.64■■□□□ 1.38
CLPB-202ENST00000340729 CSF1RP07333 972 aa23.64■■□□□ 1.38
CLPB-202ENST00000340729 FMR1Q06787 632 aaKnown RBP eCLIP23.64■■□□□ 1.38
CLPB-202ENST00000340729 ALX1Q15699 326 aa23.64■■□□□ 1.38
CLPB-202ENST00000340729 PDILTQ8N807 584 aa23.64■■□□□ 1.38
CLPB-202ENST00000340729 SPATA20Q8TB22 786 aa23.64■■□□□ 1.38
CLPB-202ENST00000340729 HNRNPLLQ8WVV9 542 aaKnown RBP23.64■■□□□ 1.38
CLPB-202ENST00000340729 FBXO2Q9UK22 296 aaPredicted RBP23.64■■□□□ 1.38
CLPB-202ENST00000340729 A0A1B0GTH6 734 aa23.64■■□□□ 1.37
CLPB-202ENST00000340729 GOLGA8AA7E2F4 631 aa23.64■■□□□ 1.37
CLPB-202ENST00000340729 FMNL1O95466 1100 aaPredicted RBP23.64■■□□□ 1.37
CLPB-202ENST00000340729 CCDC175P0C221 793 aa23.64■■□□□ 1.37
CLPB-202ENST00000340729 CDK11BP21127 795 aaKnown RBP23.64■■□□□ 1.37
CLPB-202ENST00000340729 HSP90AB3PQ58FF7 597 aa23.64■■□□□ 1.37
CLPB-202ENST00000340729 FAM177A1Q8N128 213 aaPredicted RBP23.64■■□□□ 1.37
CLPB-202ENST00000340729 SMARCE1Q969G3 411 aa23.64■■□□□ 1.37
CLPB-202ENST00000340729 PCDH11XQ9BZA7 1347 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 PCDH11YQ9BZA8 1340 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 MAP2K7O14733 419 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 FOXN1O15353 648 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 SSRP1Q08945 709 aaKnown RBP23.63■■□□□ 1.37
CLPB-202ENST00000340729 RILPL1Q5EBL4 403 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 MICU3Q86XE3 530 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 DHX58Q96C10 678 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 DENND2AQ9ULE3 1009 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 POTEB2H3BUK9 544 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 A1BGP04217 495 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 IFNAR1P17181 557 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 MCAMP43121 646 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 ADKP55263 362 aaKnown RBP23.63■■□□□ 1.37
CLPB-202ENST00000340729 EXOC4Q96A65 974 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 FOXP1Q9H334 677 aaPredicted RBP23.63■■□□□ 1.37
CLPB-202ENST00000340729 STRN4Q9NRL3 753 aa23.63■■□□□ 1.37
CLPB-202ENST00000340729 MMP1P03956 469 aa23.62■■□□□ 1.37
CLPB-202ENST00000340729 PCCAP05165 728 aaPredicted RBP23.62■■□□□ 1.37
CLPB-202ENST00000340729 PLCD1P51178 756 aa23.62■■□□□ 1.37
CLPB-202ENST00000340729 TCIRG1Q13488 830 aa23.62■■□□□ 1.37
CLPB-202ENST00000340729 NKX2-3Q8TAU0 364 aa23.62■■□□□ 1.37
CLPB-202ENST00000340729 EPC1Q9H2F5 836 aa23.62■■□□□ 1.37
CLPB-202ENST00000340729 TBC1D2BQ9UPU7 963 aa23.62■■□□□ 1.37
CLPB-202ENST00000340729 ERVV-2B6SEH9 535 aa23.61■■□□□ 1.37
CLPB-202ENST00000340729 AKR1B15C9JRZ8 316 aaPredicted RBP23.61■■□□□ 1.37
CLPB-202ENST00000340729 GTF2E1P29083 439 aaPredicted RBP23.61■■□□□ 1.37
CLPB-202ENST00000340729 TOB1P50616 345 aaPredicted RBP23.61■■□□□ 1.37
CLPB-202ENST00000340729 SAFBQ15424 915 aaKnown RBP eCLIP23.61■■□□□ 1.37
CLPB-202ENST00000340729 SRGAP1Q7Z6B7 1085 aa23.61■■□□□ 1.37
CLPB-202ENST00000340729 ZCRB1Q8TBF4 217 aaKnown RBP23.61■■□□□ 1.37
CLPB-202ENST00000340729 ROBO1Q9Y6N7 1651 aa23.61■■□□□ 1.37
CLPB-202ENST00000340729 B4E1Z4 1266 aa23.61■■□□□ 1.37
CLPB-202ENST00000340729 RXRAP19793 462 aa23.61■■□□□ 1.37
CLPB-202ENST00000340729 PTPN21Q16825 1174 aa23.61■■□□□ 1.37
CLPB-202ENST00000340729 PI16Q6UXB8 463 aa23.61■■□□□ 1.37
CLPB-202ENST00000340729 TIAM2Q8IVF5 1701 aa23.61■■□□□ 1.37
CLPB-202ENST00000340729 CCDC12Q8WUD4 166 aaPredicted RBP23.61■■□□□ 1.37
CLPB-202ENST00000340729 SENP2Q9HC62 589 aa23.61■■□□□ 1.37
CLPB-202ENST00000340729 TNS2Q63HR2 1409 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 USP5P45974 858 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 IFIT5Q13325 482 aaKnown RBP23.6■■□□□ 1.37
CLPB-202ENST00000340729 LONRF2Q1L5Z9 754 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 SLC9C2Q5TAH2 1124 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 CEP112Q8N8E3 955 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 MED15Q96RN5 788 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 SERTAD1Q9UHV2 236 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 PRR29P0C7W0 189 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 CAPN2P17655 700 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 ST5P78524 1137 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 TAF7LQ5H9L4 462 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 TMEM67Q5HYA8 995 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 NFXL1Q6ZNB6 911 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 NEK11Q8NG66 645 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 AK7Q96M32 723 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 CARD10Q9BWT7 1032 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 MRPL44Q9H9J2 332 aaKnown RBP23.6■■□□□ 1.37
CLPB-202ENST00000340729 RAB21Q9UL25 225 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 RIPOR2Q9Y4F9 1068 aa23.6■■□□□ 1.37
CLPB-202ENST00000340729 SRPRBQ9Y5M8 271 aaKnown RBP23.6■■□□□ 1.37
CLPB-202ENST00000340729 POLR2DO15514 142 aaKnown RBP23.59■■□□□ 1.37
CLPB-202ENST00000340729 ACTN4O43707 911 aaKnown RBP23.59■■□□□ 1.37
CLPB-202ENST00000340729 APTXQ7Z2E3 356 aaKnown RBP23.59■■□□□ 1.37
CLPB-202ENST00000340729 MSANTD4Q8NCY6 345 aa23.59■■□□□ 1.37
CLPB-202ENST00000340729 SLC26A6Q9BXS9 759 aa23.59■■□□□ 1.37
CLPB-202ENST00000340729 ADGRG1Q9Y653 693 aa23.59■■□□□ 1.37
CLPB-202ENST00000340729 SLC12A7Q9Y666 1083 aa23.59■■□□□ 1.37
CLPB-202ENST00000340729 ZBTB22O15209 634 aa23.58■■□□□ 1.37
CLPB-202ENST00000340729 IL2RBP14784 551 aa23.58■■□□□ 1.37
CLPB-202ENST00000340729 PBX1P40424 430 aa23.58■■□□□ 1.37
CLPB-202ENST00000340729 CHMP4BP1P59074 171 aa23.58■■□□□ 1.37
CLPB-202ENST00000340729 BBXQ8WY36 941 aaPredicted RBP23.58■■□□□ 1.37
CLPB-202ENST00000340729 CDC23Q9UJX2 597 aa23.58■■□□□ 1.37
CLPB-202ENST00000340729 CEP131Q9UPN4 1083 aa23.58■■□□□ 1.37
CLPB-202ENST00000340729 BTBD18B2RXH4 712 aa23.58■■□□□ 1.36
CLPB-202ENST00000340729 SEMA3EO15041 775 aa23.58■■□□□ 1.36
CLPB-202ENST00000340729 FECHP22830 423 aa23.58■■□□□ 1.36
CLPB-202ENST00000340729 RAD51AP2Q09MP3 1159 aa23.58■■□□□ 1.36
CLPB-202ENST00000340729 DIS3L2Q8IYB7 885 aaKnown RBP23.58■■□□□ 1.36
CLPB-202ENST00000340729 MTA3Q9BTC8 594 aa23.58■■□□□ 1.36
CLPB-202ENST00000340729 CNNM2Q9H8M5 875 aa23.58■■□□□ 1.36
CLPB-202ENST00000340729 SAMSN1Q9NSI8 373 aaKnown RBP23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms