RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 MB21D2Q8IYB1 491 aaPredicted RBP17.81■□□□□ 0.44
TUBB4B-201ENST00000340384 NAPBQ9H115 298 aa17.81■□□□□ 0.44
TUBB4B-201ENST00000340384 SPDYE2BA6NHP3 402 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 WNT10BO00744 389 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 PRKAB2O43741 272 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 SPDYE6P0CI01 402 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 ZNF445P59923 1031 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 APOBRQ0VD83 1088 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 NBPF9Q3BBW0 867 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 CDC42EP5Q6NZY7 148 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 OGFOD1Q8N543 542 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 SMARCC2Q8TAQ2 1214 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 TRPM4Q8TD43 1214 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 SH3RF3Q8TEJ3 882 aaPredicted RBP17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 LRRC2Q9BYS8 371 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 CNNM2Q9H8M5 875 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 ASTN2O75129 1339 aaPredicted RBP17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 MAGEB6P1A0A0J9YX57 407 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 SCRN1Q12765 414 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 TBC1D10BQ4KMP7 808 aaPredicted RBP17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 RBM26Q5T8P6 1007 aaKnown RBP17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 GPT2Q8TD30 523 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 HDAC9Q9UKV0 1011 aa17.8■□□□□ 0.44
TUBB4B-201ENST00000340384 H3BQV1 296 aa17.79■□□□□ 0.44
TUBB4B-201ENST00000340384 RBM5P52756 815 aaKnown RBP eCLIP17.79■□□□□ 0.44
TUBB4B-201ENST00000340384 KRT85P78386 507 aa17.79■□□□□ 0.44
TUBB4B-201ENST00000340384 IFFO2Q5TF58 517 aa17.79■□□□□ 0.44
TUBB4B-201ENST00000340384 USP48Q86UV5 1035 aa17.79■□□□□ 0.44
TUBB4B-201ENST00000340384 SLF2Q8IX21 1173 aa17.79■□□□□ 0.44
TUBB4B-201ENST00000340384 IFNL3Q8IZI9 196 aa17.79■□□□□ 0.44
TUBB4B-201ENST00000340384 TDRD3Q9H7E2 651 aaKnown RBP17.79■□□□□ 0.44
TUBB4B-201ENST00000340384 GRPEL1Q9HAV7 217 aa17.79■□□□□ 0.44
TUBB4B-201ENST00000340384 NAP1L2Q9ULW6 460 aaPredicted RBP17.79■□□□□ 0.44
TUBB4B-201ENST00000340384 TCHHQ07283 1943 aa17.78■□□□□ 0.44
TUBB4B-201ENST00000340384 PDIA3P30101 505 aaKnown RBP17.78■□□□□ 0.44
TUBB4B-201ENST00000340384 MMP14P50281 582 aa17.78■□□□□ 0.44
TUBB4B-201ENST00000340384 UBE2HP62256 183 aa17.78■□□□□ 0.44
TUBB4B-201ENST00000340384 DLGAP5Q15398 846 aa17.78■□□□□ 0.44
TUBB4B-201ENST00000340384 TMEM87BQ96K49 555 aa17.78■□□□□ 0.44
TUBB4B-201ENST00000340384 ZSCAN16Q9H4T2 348 aaPredicted RBP17.78■□□□□ 0.44
TUBB4B-201ENST00000340384 GSG1L2A8MUP6 293 aa17.77■□□□□ 0.44
TUBB4B-201ENST00000340384 H7C1D1 291 aa17.77■□□□□ 0.44
TUBB4B-201ENST00000340384 WDHD1O75717 1129 aaPredicted RBP17.77■□□□□ 0.44
TUBB4B-201ENST00000340384 CACNB3P54284 484 aa17.77■□□□□ 0.44
TUBB4B-201ENST00000340384 ZSCAN23Q3MJ62 389 aa17.77■□□□□ 0.44
TUBB4B-201ENST00000340384 NSUN7Q8NE18 718 aaKnown RBP17.77■□□□□ 0.44
TUBB4B-201ENST00000340384 KRT23Q9C075 422 aa17.77■□□□□ 0.44
TUBB4B-201ENST00000340384 USP40Q9NVE5 1235 aa17.77■□□□□ 0.44
TUBB4B-201ENST00000340384 MKRN1Q9UHC7 482 aaKnown RBP17.77■□□□□ 0.44
TUBB4B-201ENST00000340384 CNPY2Q9Y2B0 182 aa17.77■□□□□ 0.44
TUBB4B-201ENST00000340384 SLC4A4Q9Y6R1 1079 aa17.77■□□□□ 0.44
TUBB4B-201ENST00000340384 TDO2P48775 406 aa17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 NFIAQ12857 509 aa17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 KIF4BQ2VIQ3 1234 aa17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 FOXD4L6Q3SYB3 417 aaPredicted RBP17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 FOXD4L3Q6VB84 417 aaPredicted RBP17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 SDR42E1Q8WUS8 393 aa17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 RNF41Q9H4P4 317 aaPredicted RBP17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 EPB41L4AQ9HCS5 686 aaPredicted RBP17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 DDX4Q9NQI0 724 aaKnown RBP17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 WDR90Q96KV7 1748 aa17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 PTPDC1A2A3K4 754 aa17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 JAK2O60674 1132 aa17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 BAG3O95817 575 aa17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 CDC37L1Q7L3B6 337 aa17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 ZFPM1Q8IX07 1006 aa17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 ADARB2Q9NS39 739 aaKnown RBP17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 ZNF70Q9UC06 446 aaPredicted RBP17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 ANGEL1Q9UNK9 670 aaKnown RBP17.76■□□□□ 0.43
TUBB4B-201ENST00000340384 KLF18A0A0U1RQI7 1052 aa17.75■□□□□ 0.43
TUBB4B-201ENST00000340384 CLRN2A0PK11 232 aa17.75■□□□□ 0.43
TUBB4B-201ENST00000340384 LETM1O95202 739 aaPredicted RBP17.75■□□□□ 0.43
TUBB4B-201ENST00000340384 SPDYE2Q495Y8 402 aa17.75■□□□□ 0.43
TUBB4B-201ENST00000340384 CHST3Q7LGC8 479 aa17.75■□□□□ 0.43
TUBB4B-201ENST00000340384 RGS22Q8NE09 1264 aa17.75■□□□□ 0.43
TUBB4B-201ENST00000340384 CHAMP1Q96JM3 812 aa17.75■□□□□ 0.43
TUBB4B-201ENST00000340384 MTA3Q9BTC8 594 aa17.75■□□□□ 0.43
TUBB4B-201ENST00000340384 SCAND2PQ9GZW5 306 aaPredicted RBP17.75■□□□□ 0.43
TUBB4B-201ENST00000340384 TAF1DQ9H5J8 278 aaPredicted RBP17.75■□□□□ 0.43
TUBB4B-201ENST00000340384 FAM198AQ9UFP1 575 aa17.75■□□□□ 0.43
TUBB4B-201ENST00000340384 HACL1Q9UJ83 578 aa17.75■□□□□ 0.43
TUBB4B-201ENST00000340384 SCAF8Q9UPN6 1271 aaKnown RBP17.75■□□□□ 0.43
TUBB4B-201ENST00000340384 GOLGA8BA8MQT2 603 aa17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 SMIM22K7EJ46 135 aa17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 FIBPO43427 364 aa17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 EPHX2P34913 555 aa17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 CCT2P78371 535 aaKnown RBP17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 EVX2Q03828 476 aa17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 DNM1Q05193 864 aaKnown RBP17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 AKNAD1Q5T1N1 836 aa17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 CPLX2Q6PUV4 134 aaKnown RBP17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 TBC1D10CQ8IV04 446 aa17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 TGFBRAP1Q8WUH2 860 aa17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 NBPF3Q9H094 633 aa17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 RRAGCQ9HB90 399 aa17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 ELP1O95163 1332 aa17.74■□□□□ 0.43
TUBB4B-201ENST00000340384 CPLX1O14810 134 aa17.73■□□□□ 0.43
TUBB4B-201ENST00000340384 CDKL5O76039 1030 aa17.73■□□□□ 0.43
TUBB4B-201ENST00000340384 XRCC6P12956 609 aaKnown RBP eCLIP17.73■□□□□ 0.434e-6■■□□□ 13.8
TUBB4B-201ENST00000340384 LMOD1P29536 600 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms