RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 ESPNB1AK53 854 aa18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 SSRP1Q08945 709 aaKnown RBP18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 COL23A1Q86Y22 540 aaPredicted RBP18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 SH3RF3Q8TEJ3 882 aaPredicted RBP18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 CD209Q9NNX6 404 aa18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 POLR3EQ9NVU0 708 aa18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 GGA1Q9UJY5 639 aa18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 LTBP1Q14766 1721 aa18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 KLRG2A4D1S0 409 aaPredicted RBP18.88■□□□□ 0.61
SCNN1A-202ENST00000338748 CCDC192P0DO97 292 aa18.88■□□□□ 0.61
SCNN1A-202ENST00000338748 RBM6P78332 1123 aaKnown RBP18.88■□□□□ 0.61
SCNN1A-202ENST00000338748 SPTY2D1Q68D10 685 aaPredicted RBP18.88■□□□□ 0.61
SCNN1A-202ENST00000338748 FANCBQ8NB91 859 aa18.88■□□□□ 0.61
SCNN1A-202ENST00000338748 ATP8A2Q9NTI2 1148 aa18.88■□□□□ 0.61
SCNN1A-202ENST00000338748 MKRN1Q9UHC7 482 aaKnown RBP18.88■□□□□ 0.61
SCNN1A-202ENST00000338748 FAM47AQ5JRC9 791 aa18.88■□□□□ 0.61
SCNN1A-202ENST00000338748 OLFM4Q6UX06 510 aa18.88■□□□□ 0.61
SCNN1A-202ENST00000338748 ENGASEQ8NFI3 743 aa18.88■□□□□ 0.61
SCNN1A-202ENST00000338748 TBC1D16Q8TBP0 767 aa18.88■□□□□ 0.61
SCNN1A-202ENST00000338748 AKT1S1Q96B36 256 aa18.88■□□□□ 0.61
SCNN1A-202ENST00000338748 STK38Q15208 465 aa18.87■□□□□ 0.61
SCNN1A-202ENST00000338748 TMTC2Q8N394 836 aa18.87■□□□□ 0.61
SCNN1A-202ENST00000338748 CRACR2BQ8N4Y2 399 aaPredicted RBP18.87■□□□□ 0.61
SCNN1A-202ENST00000338748 FSIP1Q8NA03 581 aa18.87■□□□□ 0.61
SCNN1A-202ENST00000338748 MCM9Q9NXL9 1143 aa18.87■□□□□ 0.61
SCNN1A-202ENST00000338748 LRRC37AA6NMS7 1700 aa18.87■□□□□ 0.61
SCNN1A-202ENST00000338748 DLEC1Q9Y238 1755 aa18.86■□□□□ 0.61
SCNN1A-202ENST00000338748 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.86■□□□□ 0.61
SCNN1A-202ENST00000338748 AP5Z1O43299 807 aa18.86■□□□□ 0.61
SCNN1A-202ENST00000338748 APBA3O96018 575 aa18.86■□□□□ 0.61
SCNN1A-202ENST00000338748 ATP2B4P23634 1241 aa18.86■□□□□ 0.61
SCNN1A-202ENST00000338748 SHISA4Q96DD7 197 aa18.86■□□□□ 0.61
SCNN1A-202ENST00000338748 ARPP21Q9UBL0 812 aaPredicted RBP18.86■□□□□ 0.61
SCNN1A-202ENST00000338748 KCNJ14Q9UNX9 436 aa18.86■□□□□ 0.61
SCNN1A-202ENST00000338748 BBOX1O75936 387 aa18.86■□□□□ 0.61
SCNN1A-202ENST00000338748 YEATS4O95619 227 aa18.86■□□□□ 0.61
SCNN1A-202ENST00000338748 IFIT1BQ5T764 474 aaKnown RBP18.86■□□□□ 0.61
SCNN1A-202ENST00000338748 ANO1Q5XXA6 986 aa18.86■□□□□ 0.61
SCNN1A-202ENST00000338748 A0A1B0GVL5 298 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 ORC4O43929 436 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 IL1R1P14778 569 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 U2AF2P26368 475 aaKnown RBP eCLIP18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 CRAMP1Q96RY5 1269 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 PODXL2Q9NZ53 605 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 hCG_1642624A0A1W2PR95 340 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 SPTLC2O15270 562 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 PLEKHA8P1O95397 391 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 RCAN1P53805 252 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 FAM160A1Q05DH4 1040 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 TROAPQ12815 778 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 UVSSAQ2YD98 709 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 SBK1Q52WX2 424 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 IQCA1Q86XH1 822 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 RGS22Q8NE09 1264 aa18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 RTFDC1Q9BY42 306 aaPredicted RBP18.85■□□□□ 0.61
SCNN1A-202ENST00000338748 MROH7-TTC4A0A0A0MT08 1334 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 A0A087WWV3 80 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 PLSCR1O15162 318 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 PCP11498 1178 aaKnown RBP18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 FUT2Q10981 343 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 SF3A1Q15459 793 aaKnown RBP18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 ANO6Q4KMQ2 910 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 ADALQ6DHV7 355 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 CCDC73Q6ZRK6 1079 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 KLHL34Q8N239 644 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 KCNG4Q8TDN1 519 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 DYNLL2Q96FJ2 89 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 MYH6P13533 1939 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 BTBD18B2RXH4 712 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 PPEF1O14829 653 aaPredicted RBP18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 WDHD1O75717 1129 aaPredicted RBP18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 MARCKSP29966 332 aaPredicted RBP18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 NDUFA8P51970 172 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 TRIM29Q14134 588 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 AXDND1Q5T1B0 1012 aaPredicted RBP18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 TRIM22Q8IYM9 498 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 FMR1NBQ8N0W7 255 aaPredicted RBP18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 MRPS27Q92552 414 aaKnown RBP18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 ERCC4Q92889 916 aaPredicted RBP18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 NRXN2Q9P2S2 1712 aa18.84■□□□□ 0.61
SCNN1A-202ENST00000338748 BAZ2BQ9UIF8 2168 aaKnown RBP18.83■□□□□ 0.61
SCNN1A-202ENST00000338748 COL11A2P13942 1736 aaPredicted RBP18.83■□□□□ 0.61
SCNN1A-202ENST00000338748 C6orf229H3BNL8 230 aa18.83■□□□□ 0.6
SCNN1A-202ENST00000338748 MMP1P03956 469 aa18.83■□□□□ 0.6
SCNN1A-202ENST00000338748 USP5P45974 858 aa18.83■□□□□ 0.6
SCNN1A-202ENST00000338748 GNL2Q13823 731 aaKnown RBP18.83■□□□□ 0.6
SCNN1A-202ENST00000338748 C12orf60Q5U649 245 aa18.83■□□□□ 0.6
SCNN1A-202ENST00000338748 LUZP1Q86V48 1076 aa18.83■□□□□ 0.6
SCNN1A-202ENST00000338748 TGFBRAP1Q8WUH2 860 aa18.83■□□□□ 0.6
SCNN1A-202ENST00000338748 MAP3K14Q99558 947 aa18.83■□□□□ 0.6
SCNN1A-202ENST00000338748 CDK5RAP2Q96SN8 1893 aa18.83■□□□□ 0.6
SCNN1A-202ENST00000338748 NAV1Q8NEY1 1877 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 CCDC196A0A1B0GTZ2 297 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 PRKCSHP14314 528 aaPredicted RBP18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 PTPAQ15257 358 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 MSL1Q68DK7 614 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 ZNF772Q68DY9 489 aaPredicted RBP18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 TMED8Q6PL24 325 aaPredicted RBP18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 FAM200AQ8TCP9 573 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms