RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 FAM193AP78312 1265 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 ICA1Q05084 483 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 CNNM4Q6P4Q7 775 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 CERKQ8TCT0 537 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 KIFC2Q96AC6 838 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 GDPD2Q9HCC8 539 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 ZBTB1Q9Y2K1 713 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 ERVK-7P63135 1459 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 HARSP12081 509 aaKnown RBP10.07□□□□□ -0.8
CD28-201ENST00000324106 IREB2P48200 963 aaKnown RBP10.07□□□□□ -0.8
CD28-201ENST00000324106 CIAPIN1Q6FI81 312 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 TTLL7Q6ZT98 887 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 PLCD3Q8N3E9 789 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 CHMP2AO43633 222 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 CNGA1P29973 690 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 AK2P54819 239 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 KRT83P78385 493 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 TMCO3Q6UWJ1 677 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 KLHDC4Q8TBB5 520 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.07□□□□□ -0.8
CD28-201ENST00000324106 CCDC77Q9BR77 488 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 DSCC1Q9BVC3 393 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 ATF5Q9Y2D1 282 aaPredicted RBP10.07□□□□□ -0.8
CD28-201ENST00000324106 JCADQ9P266 1359 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 TCP10L2B9ZVM9 353 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 CETN3O15182 167 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 TMOD1P28289 359 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 CHRNDQ07001 517 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 CCDC14Q49A88 953 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 SWAP70Q9UH65 585 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 RASAL2Q9UJF2 1139 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 ATP7BP35670 1465 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 USP17L12C9JPN9 530 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 USP17L21D6R901 530 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 TACC1O75410 805 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 EEF2P13639 858 aaKnown RBP10.06□□□□□ -0.8
CD28-201ENST00000324106 ARID4AP29374 1257 aaPredicted RBP10.06□□□□□ -0.8
CD28-201ENST00000324106 MAP2K1Q02750 393 aaPredicted RBP10.06□□□□□ -0.8
CD28-201ENST00000324106 CKAP4Q07065 602 aaKnown RBP10.06□□□□□ -0.8
CD28-201ENST00000324106 VWA3BQ502W6 1294 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 KRT26Q7Z3Y9 468 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 LRWD1Q9UFC0 647 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 CCDC66A2RUB6 948 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 PDE8BO95263 885 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 RPS6KB1P23443 525 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 NT5C2P49902 561 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 DPP9Q86TI2 863 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 SNX21Q969T3 373 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 NACA2Q9H009 215 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 NT5C3AQ9H0P0 336 aa10.06□□□□□ -0.8
CD28-201ENST00000324106 ABT1Q9ULW3 272 aaKnown RBP10.06□□□□□ -0.8
CD28-201ENST00000324106 RICTORQ6R327 1708 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 VWA3AA6NCI4 1184 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 TRAF5O00463 557 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 MMP10P09238 476 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 KLHL40Q2TBA0 621 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 SLC27A3Q5K4L6 730 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 CDC37L1Q7L3B6 337 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 RSPH3Q86UC2 560 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 ZBTB8OSQ8IWT0 167 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 CCDC42Q96M95 316 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 ADD3Q9UEY8 706 aaKnown RBP10.05□□□□□ -0.8
CD28-201ENST00000324106 TRIM35Q9UPQ4 493 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 RPS6KA4O75676 772 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 FLOT1O75955 427 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 GAS8O95995 478 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 FOSP01100 380 aaPredicted RBP10.05□□□□□ -0.8
CD28-201ENST00000324106 ALAS1P13196 640 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 P4HA1P13674 534 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 ISM2Q6H9L7 571 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 GABPB2Q8TAK5 448 aaPredicted RBP10.05□□□□□ -0.8
CD28-201ENST00000324106 MASTLQ96GX5 879 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 JPH2Q9BR39 696 aaPredicted RBP10.05□□□□□ -0.8
CD28-201ENST00000324106 ADPGKQ9BRR6 497 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 DHX36Q9H2U1 1008 aaKnown RBP10.05□□□□□ -0.8
CD28-201ENST00000324106 JADE2Q9NQC1 790 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 IGSF1Q8N6C5 1336 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 CALUO43852 315 aaPredicted RBP10.05□□□□□ -0.8
CD28-201ENST00000324106 BTDP43251 543 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 GYG1P46976 350 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 ABCB5Q2M3G0 1257 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 ARHGEF16Q5VV41 709 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 PNMA3Q9UL41 463 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 USP6P35125 1406 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 GAS7O60861 476 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 RXRAP19793 462 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 YWHAEP62258 255 aaKnown RBP10.05□□□□□ -0.8
CD28-201ENST00000324106 PPARAQ07869 468 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 USH1GQ495M9 461 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 NCAPH2Q6IBW4 605 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 ZSCAN30Q86W11 494 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 DIS3L2Q8IYB7 885 aaKnown RBP10.05□□□□□ -0.8
CD28-201ENST00000324106 USP25Q9UHP3 1055 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 ATP10DQ9P241 1426 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 ARHGEF40Q8TER5 1519 aa10.05□□□□□ -0.8
CD28-201ENST00000324106 CCNT1O60563 726 aaKnown RBP10.04□□□□□ -0.8
CD28-201ENST00000324106 POLR2MP0CAP2 368 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 PLCB3Q01970 1234 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 PDE4DQ08499 809 aa10.04□□□□□ -0.8
CD28-201ENST00000324106 GPATCH4Q5T3I0 446 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms