RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 ANGEL2Q5VTE6 544 aaKnown RBP16.12■□□□□ 0.17
PRPF18-201ENST00000320054 MFSD6Q6ZSS7 791 aa16.12■□□□□ 0.17
PRPF18-201ENST00000320054 C16orf86Q6ZW13 317 aa16.12■□□□□ 0.17
PRPF18-201ENST00000320054 PNMA8AQ86V59 439 aaPredicted RBP16.12■□□□□ 0.17
PRPF18-201ENST00000320054 JAKMIP1Q96N16 626 aaKnown RBP16.12■□□□□ 0.17
PRPF18-201ENST00000320054 NEK1Q96PY6 1258 aa16.12■□□□□ 0.17
PRPF18-201ENST00000320054 KRT23Q9C075 422 aa16.12■□□□□ 0.17
PRPF18-201ENST00000320054 ZSWIM6Q9HCJ5 1215 aa16.12■□□□□ 0.17
PRPF18-201ENST00000320054 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.12■□□□□ 0.17
PRPF18-201ENST00000320054 PPP2R3BQ9Y5P8 575 aa16.12■□□□□ 0.17
PRPF18-201ENST00000320054 DDTLA6NHG4 134 aaPredicted RBP16.11■□□□□ 0.17
PRPF18-201ENST00000320054 VEGFAP15692 232 aaPredicted RBP16.11■□□□□ 0.17
PRPF18-201ENST00000320054 GABPAQ06546 454 aa16.11■□□□□ 0.17
PRPF18-201ENST00000320054 TRDNQ13061 729 aa16.11■□□□□ 0.17
PRPF18-201ENST00000320054 RASA3Q14644 834 aa16.11■□□□□ 0.17
PRPF18-201ENST00000320054 METTL16Q86W50 562 aaKnown RBP16.11■□□□□ 0.17
PRPF18-201ENST00000320054 FOXP4Q8IVH2 680 aaPredicted RBP16.11■□□□□ 0.17
PRPF18-201ENST00000320054 ZSCAN29Q8IWY8 852 aaPredicted RBP16.11■□□□□ 0.17
PRPF18-201ENST00000320054 NCOA7Q8NI08 942 aa16.11■□□□□ 0.17
PRPF18-201ENST00000320054 ZNF287Q9HBT7 754 aa16.11■□□□□ 0.17
PRPF18-201ENST00000320054 GGA3Q9NZ52 723 aa16.11■□□□□ 0.17
PRPF18-201ENST00000320054 SWAP70Q9UH65 585 aa16.11■□□□□ 0.17
PRPF18-201ENST00000320054 SERPINB13Q9UIV8 391 aa16.11■□□□□ 0.17
PRPF18-201ENST00000320054 TACC3Q9Y6A5 838 aa16.11■□□□□ 0.17
PRPF18-201ENST00000320054 GREB1LQ9C091 1923 aaPredicted RBP16.11■□□□□ 0.17
PRPF18-201ENST00000320054 ATAD5Q96QE3 1844 aa16.1■□□□□ 0.17
PRPF18-201ENST00000320054 SMIM22K7EJ46 135 aa16.1■□□□□ 0.17
PRPF18-201ENST00000320054 CASTP20810 708 aaKnown RBP16.1■□□□□ 0.17
PRPF18-201ENST00000320054 EVX2Q03828 476 aa16.1■□□□□ 0.17
PRPF18-201ENST00000320054 BLOC1S2Q6QNY1 142 aa16.1■□□□□ 0.17
PRPF18-201ENST00000320054 RUFY3Q7L099 469 aa16.1■□□□□ 0.17
PRPF18-201ENST00000320054 RALYLQ86SE5 291 aaKnown RBP16.1■□□□□ 0.17
PRPF18-201ENST00000320054 TEPSINQ96N21 525 aa16.1■□□□□ 0.17
PRPF18-201ENST00000320054 DEFB129Q9H1M3 183 aa16.1■□□□□ 0.17
PRPF18-201ENST00000320054 CYP46A1Q9Y6A2 500 aa16.1■□□□□ 0.17
PRPF18-201ENST00000320054 WDR19Q8NEZ3 1342 aa16.1■□□□□ 0.17
PRPF18-201ENST00000320054 SLC4A8Q2Y0W8 1093 aa16.09■□□□□ 0.17
PRPF18-201ENST00000320054 MB21D2Q8IYB1 491 aaPredicted RBP16.09■□□□□ 0.17
PRPF18-201ENST00000320054 DCPSQ96C86 337 aaKnown RBP16.09■□□□□ 0.17
PRPF18-201ENST00000320054 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
PRPF18-201ENST00000320054 CSRNP1Q96S65 589 aa16.09■□□□□ 0.17
PRPF18-201ENST00000320054 TMEM39BQ9GZU3 492 aa16.09■□□□□ 0.17
PRPF18-201ENST00000320054 HERC5Q9UII4 1024 aaKnown RBP16.09■□□□□ 0.17
PRPF18-201ENST00000320054 NEDD4P46934 1319 aa16.09■□□□□ 0.17
PRPF18-201ENST00000320054 TBC1D12O60347 775 aa16.08■□□□□ 0.16
PRPF18-201ENST00000320054 RPS6KB1P23443 525 aa16.08■□□□□ 0.16
PRPF18-201ENST00000320054 CDK8P49336 464 aa16.08■□□□□ 0.16
PRPF18-201ENST00000320054 DHX32Q7L7V1 743 aaKnown RBP16.08■□□□□ 0.16
PRPF18-201ENST00000320054 ESR2Q92731 530 aa16.08■□□□□ 0.16
PRPF18-201ENST00000320054 HOOK2Q96ED9 719 aa16.08■□□□□ 0.16
PRPF18-201ENST00000320054 MTA3Q9BTC8 594 aa16.08■□□□□ 0.16
PRPF18-201ENST00000320054 ALDH8A1Q9H2A2 487 aaPredicted RBP16.08■□□□□ 0.16
PRPF18-201ENST00000320054 RRAGCQ9HB90 399 aa16.08■□□□□ 0.16
PRPF18-201ENST00000320054 INCENPQ9NQS7 918 aa16.08■□□□□ 0.16
PRPF18-201ENST00000320054 RBM19Q9Y4C8 960 aaKnown RBP16.08■□□□□ 0.16
PRPF18-201ENST00000320054 B4E1Z4 1266 aa16.07■□□□□ 0.16
PRPF18-201ENST00000320054 MCM5P33992 734 aa16.07■□□□□ 0.16
PRPF18-201ENST00000320054 NEK4P51957 841 aa16.07■□□□□ 0.16
PRPF18-201ENST00000320054 EXOSC10Q01780 885 aaKnown RBP16.07■□□□□ 0.16
PRPF18-201ENST00000320054 MAP3K10Q02779 954 aa16.07■□□□□ 0.16
PRPF18-201ENST00000320054 STK11IPQ8N1F8 1099 aa16.07■□□□□ 0.16
PRPF18-201ENST00000320054 CRACR2BQ8N4Y2 399 aaPredicted RBP16.07■□□□□ 0.16
PRPF18-201ENST00000320054 UPF3BQ9BZI7 483 aaKnown RBP16.07■□□□□ 0.16
PRPF18-201ENST00000320054 MKNK2Q9HBH9 465 aa16.07■□□□□ 0.16
PRPF18-201ENST00000320054 MYH4Q9Y623 1939 aa16.06■□□□□ 0.16
PRPF18-201ENST00000320054 KDM4AO75164 1064 aa16.06■□□□□ 0.16
PRPF18-201ENST00000320054 RASA1P20936 1047 aa16.06■□□□□ 0.16
PRPF18-201ENST00000320054 SHMT1P34896 483 aa16.06■□□□□ 0.16
PRPF18-201ENST00000320054 EAPPQ56P03 285 aaPredicted RBP16.06■□□□□ 0.16
PRPF18-201ENST00000320054 RRP12Q5JTH9 1297 aaKnown RBP16.06■□□□□ 0.16
PRPF18-201ENST00000320054 TATDN1Q6P1N9 297 aa16.06■□□□□ 0.16
PRPF18-201ENST00000320054 SULF1Q8IWU6 871 aa16.06■□□□□ 0.16
PRPF18-201ENST00000320054 ZNF444Q8N0Y2 327 aaPredicted RBP16.06■□□□□ 0.16
PRPF18-201ENST00000320054 FBXL16Q8N461 479 aa16.06■□□□□ 0.16
PRPF18-201ENST00000320054 SLC44A5Q8NCS7 719 aa16.06■□□□□ 0.16
PRPF18-201ENST00000320054 TTC14Q96N46 770 aa16.06■□□□□ 0.16
PRPF18-201ENST00000320054 TRIM34Q9BYJ4 488 aa16.06■□□□□ 0.16
PRPF18-201ENST00000320054 DNAJC18Q9H819 358 aa16.06■□□□□ 0.16
PRPF18-201ENST00000320054 TOMM22Q9NS69 142 aa16.06■□□□□ 0.16
PRPF18-201ENST00000320054 ZSWIM5Q9P217 1185 aa16.06■□□□□ 0.16
PRPF18-201ENST00000320054 PLIN4Q96Q06 1357 aa16.05■□□□□ 0.16
PRPF18-201ENST00000320054 PRC1O43663 620 aa16.05■□□□□ 0.16
PRPF18-201ENST00000320054 ST18O60284 1047 aa16.05■□□□□ 0.16
PRPF18-201ENST00000320054 RANBP6O60518 1105 aaKnown RBP16.05■□□□□ 0.16
PRPF18-201ENST00000320054 PRDM1O75626 825 aa16.05■□□□□ 0.16
PRPF18-201ENST00000320054 CPA1P15085 419 aa16.05■□□□□ 0.16
PRPF18-201ENST00000320054 COL9A3Q14050 684 aaPredicted RBP16.05■□□□□ 0.16
PRPF18-201ENST00000320054 CYB5R4Q7L1T6 521 aa16.05■□□□□ 0.16
PRPF18-201ENST00000320054 CDAN1Q8IWY9 1227 aa16.05■□□□□ 0.16
PRPF18-201ENST00000320054 CCDC17Q96LX7 622 aa16.05■□□□□ 0.16
PRPF18-201ENST00000320054 PDRG1Q9NUG6 133 aa16.05■□□□□ 0.16
PRPF18-201ENST00000320054 DOCK1Q14185 1865 aa16.05■□□□□ 0.16
PRPF18-201ENST00000320054 PAPPA2Q9BXP8 1791 aa16.05■□□□□ 0.16
PRPF18-201ENST00000320054 ANTXR2P58335 489 aa16.04■□□□□ 0.16
PRPF18-201ENST00000320054 SUPT20HL1Q3ZLR7 823 aa16.04■□□□□ 0.16
PRPF18-201ENST00000320054 KRT26Q7Z3Y9 468 aa16.04■□□□□ 0.16
PRPF18-201ENST00000320054 LDHDQ86WU2 507 aa16.04■□□□□ 0.16
PRPF18-201ENST00000320054 NKX2-3Q8TAU0 364 aa16.04■□□□□ 0.16
PRPF18-201ENST00000320054 SNX21Q969T3 373 aa16.04■□□□□ 0.16
PRPF18-201ENST00000320054 TMEM87BQ96K49 555 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms