RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 TRIM75PA6NK02 468 aa17.54■□□□□ 0.4
RPP40-201ENST00000319533 ADCY3O60266 1144 aa17.54■□□□□ 0.4
RPP40-201ENST00000319533 PI16Q6UXB8 463 aa17.54■□□□□ 0.4
RPP40-201ENST00000319533 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
RPP40-201ENST00000319533 TBC1D9Q6ZT07 1266 aa17.54■□□□□ 0.4
RPP40-201ENST00000319533 PROCA1Q8NCQ7 364 aaPredicted RBP17.54■□□□□ 0.4
RPP40-201ENST00000319533 U2AF1L4Q8WU68 220 aaKnown RBP17.54■□□□□ 0.4
RPP40-201ENST00000319533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.54■□□□□ 0.4
RPP40-201ENST00000319533 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.54■□□□□ 0.4
RPP40-201ENST00000319533 BIN2Q9UBW5 565 aaPredicted RBP17.54■□□□□ 0.4
RPP40-201ENST00000319533 PNMA6EA0A0J9YXQ4 647 aa17.53■□□□□ 0.4
RPP40-201ENST00000319533 SGPL1O95470 568 aa17.53■□□□□ 0.4
RPP40-201ENST00000319533 UQCRFS1P1P0C7P4 283 aa17.53■□□□□ 0.4
RPP40-201ENST00000319533 CAP2P40123 477 aa17.53■□□□□ 0.4
RPP40-201ENST00000319533 MCAMP43121 646 aa17.53■□□□□ 0.4
RPP40-201ENST00000319533 FAM110CQ1W6H9 321 aa17.53■□□□□ 0.4
RPP40-201ENST00000319533 TREML2Q5T2D2 321 aa17.53■□□□□ 0.4
RPP40-201ENST00000319533 CCDC84Q86UT8 332 aaPredicted RBP17.53■□□□□ 0.4
RPP40-201ENST00000319533 SMCR8Q8TEV9 937 aaPredicted RBP17.53■□□□□ 0.4
RPP40-201ENST00000319533 UNC93B1Q9H1C4 597 aa17.53■□□□□ 0.4
RPP40-201ENST00000319533 LOC285556D6RIA3 1793 aa17.53■□□□□ 0.4
RPP40-201ENST00000319533 RANBP2P49792 3224 aaKnown RBP17.53■□□□□ 0.4
RPP40-201ENST00000319533 TNPO2O14787 897 aaKnown RBP17.52■□□□□ 0.4
RPP40-201ENST00000319533 G3BP1Q13283 466 aaKnown RBP eCLIP17.52■□□□□ 0.4
RPP40-201ENST00000319533 RRP1BQ14684 758 aaKnown RBP17.52■□□□□ 0.4
RPP40-201ENST00000319533 SH3D19Q5HYK7 790 aa17.52■□□□□ 0.4
RPP40-201ENST00000319533 GORABQ5T7V8 394 aa17.52■□□□□ 0.4
RPP40-201ENST00000319533 ZNF280CQ8ND82 737 aa17.52■□□□□ 0.4
RPP40-201ENST00000319533 DPF3Q92784 378 aa17.52■□□□□ 0.4
RPP40-201ENST00000319533 HTATIP2Q9BUP3 242 aa17.52■□□□□ 0.4
RPP40-201ENST00000319533 GPR108Q9NPR9 543 aa17.52■□□□□ 0.4
RPP40-201ENST00000319533 HERC5Q9UII4 1024 aaKnown RBP17.52■□□□□ 0.4
RPP40-201ENST00000319533 PNMA3Q9UL41 463 aa17.52■□□□□ 0.4
RPP40-201ENST00000319533 TNNQ9UQP3 1299 aa17.52■□□□□ 0.4
RPP40-201ENST00000319533 FAM196BA6NMK8 535 aa17.51■□□□□ 0.39
RPP40-201ENST00000319533 SPP2Q13103 211 aa17.51■□□□□ 0.39
RPP40-201ENST00000319533 PRO3102Q9H379 93 aa17.51■□□□□ 0.39
RPP40-201ENST00000319533 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
RPP40-201ENST00000319533 IGSF3O75054 1194 aa17.5■□□□□ 0.39
RPP40-201ENST00000319533 BCAR3O75815 825 aa17.5■□□□□ 0.39
RPP40-201ENST00000319533 INHAP05111 366 aa17.5■□□□□ 0.39
RPP40-201ENST00000319533 ATXN8OSP0DMR3 200 aa17.5■□□□□ 0.39
RPP40-201ENST00000319533 ELNP15502 786 aa17.5■□□□□ 0.39
RPP40-201ENST00000319533 GCLCP48506 637 aaPredicted RBP17.5■□□□□ 0.39
RPP40-201ENST00000319533 PPP4CP60510 307 aa17.5■□□□□ 0.39
RPP40-201ENST00000319533 POLA2Q14181 598 aa17.5■□□□□ 0.39
RPP40-201ENST00000319533 CHRDL2Q6WN34 429 aa17.5■□□□□ 0.39
RPP40-201ENST00000319533 METTL16Q86W50 562 aaKnown RBP17.5■□□□□ 0.39
RPP40-201ENST00000319533 TEX11Q8IYF3 940 aa17.5■□□□□ 0.39
RPP40-201ENST00000319533 ANKRD13CQ8N6S4 541 aa17.5■□□□□ 0.39
RPP40-201ENST00000319533 COA7Q96BR5 231 aa17.5■□□□□ 0.39
RPP40-201ENST00000319533 CRISPLD2Q9H0B8 497 aa17.5■□□□□ 0.39
RPP40-201ENST00000319533 PAK6Q9NQU5 681 aaPredicted RBP17.5■□□□□ 0.39
RPP40-201ENST00000319533 DOCK3Q8IZD9 2030 aa17.5■□□□□ 0.39
RPP40-201ENST00000319533 SZT2Q5T011 3432 aa17.49■□□□□ 0.39
RPP40-201ENST00000319533 USP17L5A8MUK1 530 aa17.49■□□□□ 0.39
RPP40-201ENST00000319533 FARP2O94887 1054 aaPredicted RBP17.49■□□□□ 0.39
RPP40-201ENST00000319533 PABPC4Q13310 644 aaKnown RBP eCLIP17.49■□□□□ 0.39
RPP40-201ENST00000319533 SH3RF3Q8TEJ3 882 aaPredicted RBP17.49■□□□□ 0.39
RPP40-201ENST00000319533 ZNF512BQ96KM6 892 aaPredicted RBP17.49■□□□□ 0.39
RPP40-201ENST00000319533 WDR18Q9BV38 432 aa17.49■□□□□ 0.39
RPP40-201ENST00000319533 DHX36Q9H2U1 1008 aaKnown RBP17.49■□□□□ 0.39
RPP40-201ENST00000319533 LRP2BPQ9P2M1 347 aa17.49■□□□□ 0.39
RPP40-201ENST00000319533 PI4KBQ9UBF8 816 aa17.49■□□□□ 0.39
RPP40-201ENST00000319533 ATAD5Q96QE3 1844 aa17.49■□□□□ 0.39
RPP40-201ENST00000319533 HMGCS2P54868 508 aa17.48■□□□□ 0.39
RPP40-201ENST00000319533 SSH3Q8TE77 659 aa17.48■□□□□ 0.39
RPP40-201ENST00000319533 NR2E3Q9Y5X4 410 aa17.48■□□□□ 0.39
RPP40-201ENST00000319533 SIPA1L1O43166 1804 aa17.48■□□□□ 0.39
RPP40-201ENST00000319533 ZBTB7BO15156 539 aaPredicted RBP17.47■□□□□ 0.39
RPP40-201ENST00000319533 BAG3O95817 575 aa17.47■□□□□ 0.39
RPP40-201ENST00000319533 PLCG2P16885 1265 aa17.47■□□□□ 0.39
RPP40-201ENST00000319533 HNRNPUQ00839 825 aaKnown RBP eCLIP17.47■□□□□ 0.39
RPP40-201ENST00000319533 TNNI3KQ59H18 835 aa17.47■□□□□ 0.39
RPP40-201ENST00000319533 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
RPP40-201ENST00000319533 FRAT1Q92837 279 aaPredicted RBP17.47■□□□□ 0.39
RPP40-201ENST00000319533 DEFB118Q96PH6 123 aa17.47■□□□□ 0.39
RPP40-201ENST00000319533 ASCC2Q9H1I8 757 aaPredicted RBP17.47■□□□□ 0.39
RPP40-201ENST00000319533 AS3MTQ9HBK9 375 aa17.47■□□□□ 0.39
RPP40-201ENST00000319533 RBM27Q9P2N5 1060 aaKnown RBP17.47■□□□□ 0.39
RPP40-201ENST00000319533 MORF4L1Q9UBU8 362 aa17.47■□□□□ 0.39
RPP40-201ENST00000319533 GJD2Q9UKL4 321 aa17.47■□□□□ 0.39
RPP40-201ENST00000319533 FPGT-TNNI3KV9GXZ4 949 aa17.47■□□□□ 0.39
RPP40-201ENST00000319533 MAST2Q6P0Q8 1798 aa17.47■□□□□ 0.39
RPP40-201ENST00000319533 CYP2E1P05181 493 aaPredicted RBP17.46■□□□□ 0.39
RPP40-201ENST00000319533 HOXA7P31268 230 aaPredicted RBP17.46■□□□□ 0.39
RPP40-201ENST00000319533 BACE1P56817 501 aa17.46■□□□□ 0.39
RPP40-201ENST00000319533 ATP8B2P98198 1209 aa17.46■□□□□ 0.39
RPP40-201ENST00000319533 FOXP4Q8IVH2 680 aaPredicted RBP17.46■□□□□ 0.39
RPP40-201ENST00000319533 TMEM57Q8N5G2 664 aa17.46■□□□□ 0.39
RPP40-201ENST00000319533 CLUAP1Q96AJ1 413 aa17.46■□□□□ 0.39
RPP40-201ENST00000319533 DBNDD2Q9BQY9 259 aa17.46■□□□□ 0.39
RPP40-201ENST00000319533 NOL10Q9BSC4 688 aaKnown RBP17.46■□□□□ 0.39
RPP40-201ENST00000319533 DNAJC18Q9H819 358 aa17.46■□□□□ 0.39
RPP40-201ENST00000319533 GINM1Q9NU53 330 aa17.46■□□□□ 0.39
RPP40-201ENST00000319533 AATFQ9NY61 560 aaKnown RBP eCLIP17.46■□□□□ 0.39
RPP40-201ENST00000319533 TFRCP02786 760 aaKnown RBP17.45■□□□□ 0.38
RPP40-201ENST00000319533 ASNSP08243 561 aa17.45■□□□□ 0.38
RPP40-201ENST00000319533 CCDC158Q5M9N0 1113 aa17.45■□□□□ 0.38
RPP40-201ENST00000319533 ADGRA1Q86SQ6 560 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms