RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 NCAPH2Q6IBW4 605 aa8.53□□□□□ -1.04
CDHR3-201ENST00000317716 TRIM47Q96LD4 638 aa8.53□□□□□ -1.04
CDHR3-201ENST00000317716 CCDC114Q96M63 670 aa8.53□□□□□ -1.04
CDHR3-201ENST00000317716 MYCBPQ99417 103 aaPredicted RBP8.53□□□□□ -1.04
CDHR3-201ENST00000317716 GOPCQ9HD26 462 aa8.53□□□□□ -1.04
CDHR3-201ENST00000317716 GNL3LQ9NVN8 582 aaKnown RBP8.53□□□□□ -1.04
CDHR3-201ENST00000317716 ELP1O95163 1332 aa8.53□□□□□ -1.04
CDHR3-201ENST00000317716 PSDA5PKW4 1024 aaPredicted RBP8.52□□□□□ -1.04
CDHR3-201ENST00000317716 B4E1Z4 1266 aa8.52□□□□□ -1.04
CDHR3-201ENST00000317716 EIF3CLB5ME19 914 aaKnown RBP8.52□□□□□ -1.04
CDHR3-201ENST00000317716 AKR1B10O60218 316 aa8.52□□□□□ -1.04
CDHR3-201ENST00000317716 TOB2Q14106 344 aaPredicted RBP8.52□□□□□ -1.04
CDHR3-201ENST00000317716 AKAP4Q5JQC9 854 aa8.52□□□□□ -1.04
CDHR3-201ENST00000317716 ICE2Q659A1 982 aa8.52□□□□□ -1.04
CDHR3-201ENST00000317716 SPECC1LQ69YQ0 1117 aa8.52□□□□□ -1.04
CDHR3-201ENST00000317716 EIF3CQ99613 913 aaKnown RBP8.52□□□□□ -1.04
CDHR3-201ENST00000317716 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.52□□□□□ -1.04
CDHR3-201ENST00000317716 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.52□□□□□ -1.04
CDHR3-201ENST00000317716 SERTAD1Q9UHV2 236 aa8.52□□□□□ -1.04
CDHR3-201ENST00000317716 CTNND2Q9UQB3 1225 aa8.52□□□□□ -1.04
CDHR3-201ENST00000317716 RANBP6O60518 1105 aaKnown RBP8.52□□□□□ -1.05
CDHR3-201ENST00000317716 HSF2BPO75031 334 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 TAF5LO75529 589 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 A1BGP04217 495 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 PHKG2P15735 406 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 COL9A3Q14050 684 aaPredicted RBP8.52□□□□□ -1.05
CDHR3-201ENST00000317716 IQCB1Q15051 598 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 NECTIN1Q15223 517 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 ADALQ6DHV7 355 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 KRT27Q7Z3Y8 459 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 NSUN7Q8NE18 718 aaKnown RBP8.52□□□□□ -1.05
CDHR3-201ENST00000317716 RIN2Q8WYP3 895 aaPredicted RBP8.52□□□□□ -1.05
CDHR3-201ENST00000317716 BLZF1Q9H2G9 400 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 E7EWF7 191 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 RNF40O75150 1001 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 CASP1P29466 404 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 GNGT1P63211 74 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 FAM212AQ96EL1 285 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 ZNF496Q96IT1 587 aaPredicted RBP8.52□□□□□ -1.05
CDHR3-201ENST00000317716 CEP89Q96ST8 783 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 FUCA2Q9BTY2 467 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 CABP5Q9NP86 173 aa8.52□□□□□ -1.05
CDHR3-201ENST00000317716 SAMSN1Q9NSI8 373 aaKnown RBP8.52□□□□□ -1.05
CDHR3-201ENST00000317716 SSH2Q76I76 1423 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 TFRCP02786 760 aaKnown RBP8.51□□□□□ -1.05
CDHR3-201ENST00000317716 IDEP14735 1019 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 ZNF772Q68DY9 489 aaPredicted RBP8.51□□□□□ -1.05
CDHR3-201ENST00000317716 POTEAQ6S8J7 498 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 ANKRD13DQ6ZTN6 518 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 KSR1Q8IVT5 923 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 DHX40Q8IX18 779 aaKnown RBP8.51□□□□□ -1.05
CDHR3-201ENST00000317716 FBXO18Q8NFZ0 1043 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 HELBQ8NG08 1087 aaPredicted RBP8.51□□□□□ -1.05
CDHR3-201ENST00000317716 LINS1Q8NG48 757 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.51□□□□□ -1.05
CDHR3-201ENST00000317716 ROBO1Q9Y6N7 1651 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 GOLGA6BA6NDN3 693 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 IFFO1Q0D2I5 559 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 KRT40Q6A162 431 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 IQCEQ6IPM2 695 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 CACNA2D4Q7Z3S7 1137 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 DEFB132Q7Z7B7 95 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 ANKRD13CQ8N6S4 541 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 JPH2Q9BR39 696 aaPredicted RBP8.51□□□□□ -1.05
CDHR3-201ENST00000317716 SEPT11Q9NVA2 429 aaKnown RBP8.51□□□□□ -1.05
CDHR3-201ENST00000317716 ITSN1Q15811 1721 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 XRN1Q8IZH2 1706 aaKnown RBP8.51□□□□□ -1.05
CDHR3-201ENST00000317716 VWA3AA6NCI4 1184 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 PRPF4BQ13523 1007 aaKnown RBP8.51□□□□□ -1.05
CDHR3-201ENST00000317716 E2F5Q15329 346 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 DNAJC10Q8IXB1 793 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 ZNF446Q9NWS9 450 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 ZNF219Q9P2Y4 722 aaPredicted RBP8.51□□□□□ -1.05
CDHR3-201ENST00000317716 FHOD1Q9Y613 1164 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 IGSF1Q8N6C5 1336 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 OVOS2A0A0J9YW53 1432 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 OVOS2Q6IE36 1432 aa8.51□□□□□ -1.05
CDHR3-201ENST00000317716 TMCO5BA8MYB1 307 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 CDC25BP30305 580 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 ZNF174Q15697 407 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 TNNI3KQ59H18 835 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 SLC9C2Q5TAH2 1124 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 NAA16Q6N069 864 aaPredicted RBP8.5□□□□□ -1.05
CDHR3-201ENST00000317716 KRI1Q8N9T8 703 aaKnown RBP8.5□□□□□ -1.05
CDHR3-201ENST00000317716 RABGGTAQ92696 567 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 RCOR1Q9UKL0 485 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 FPGT-TNNI3KV9GXZ4 949 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 PCDH11XQ9BZA7 1347 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 PCDH11YQ9BZA8 1340 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 TLDC2A0PJX2 215 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 TADA3O75528 432 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 CASP14P31944 242 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 PEX19P40855 299 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 AOX1Q06278 1338 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 CASP8Q14790 479 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 MSL1Q68DK7 614 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 ANKRD18AQ8IVF6 992 aa8.5□□□□□ -1.05
CDHR3-201ENST00000317716 MARCH10Q8NA82 808 aaPredicted RBP8.5□□□□□ -1.05
CDHR3-201ENST00000317716 PPANQ9NQ55 473 aaKnown RBP8.5□□□□□ -1.05
CDHR3-201ENST00000317716 LRP2BPQ9P2M1 347 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms