RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 ZBTB3Q9H5J0 574 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 TAB2Q9NYJ8 693 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 TMEM63CQ9P1W3 806 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 IMPACTQ9P2X3 320 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 TRMT112Q9UI30 125 aaKnown RBP9.69□□□□□ -0.86
USF3-201ENST00000316407 KAT6AQ92794 2004 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 MAN1A1P33908 653 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 LRRC27Q9C0I9 530 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 ASIC2Q16515 512 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 RSPH3Q86UC2 560 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 PPWD1Q96BP3 646 aaKnown RBP9.69□□□□□ -0.86
USF3-201ENST00000316407 ZNF219Q9P2Y4 722 aaPredicted RBP9.69□□□□□ -0.86
USF3-201ENST00000316407 ZNF202O95125 648 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 CHAMP1Q96JM3 812 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 CASP2P42575 452 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 CCNT1O60563 726 aaKnown RBP9.69□□□□□ -0.86
USF3-201ENST00000316407 CREB3L3Q68CJ9 461 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 USP37Q86T82 979 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 ZNF622Q969S3 477 aaKnown RBP eCLIP9.69□□□□□ -0.86
USF3-201ENST00000316407 KRT12Q99456 494 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 USP26Q9BXU7 913 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 USTQ9Y2C2 406 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 BUB1O43683 1085 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 BMP15O95972 392 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 BRD3Q15059 726 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 CABP5Q9NP86 173 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 DISP3Q9P2K9 1392 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 ZC3H18Q86VM9 953 aaKnown RBP9.68□□□□□ -0.86
USF3-201ENST00000316407 CHPF2Q9P2E5 772 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 HARSP12081 509 aaKnown RBP9.68□□□□□ -0.86
USF3-201ENST00000316407 TAF11Q15544 211 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 CDC37L1Q7L3B6 337 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 FAM207AQ9NSI2 230 aaPredicted RBP9.68□□□□□ -0.86
USF3-201ENST00000316407 TROVE2P10155 538 aaKnown RBP eCLIP9.68□□□□□ -0.86
USF3-201ENST00000316407 CD2APQ9Y5K6 639 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 CASKIN1Q8WXD9 1431 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 GOLGA8KD6RF30 607 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 HVCN1Q96D96 273 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 NCOA1Q15788 1441 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 PPFIA4O75335 1185 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 PTPN21Q16825 1174 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 MCMDC2Q4G0Z9 681 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 RHPN1Q8TCX5 695 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 NRBP1Q9UHY1 535 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 PTPN22Q9Y2R2 807 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 THAP12O43422 761 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 CHMP2AO43633 222 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 PAK1Q13153 545 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 LMBRD1Q9NUN5 540 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 PI4KAP2A4QPH2 592 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 ZNF500O60304 480 aaPredicted RBP9.68□□□□□ -0.86
USF3-201ENST00000316407 PI4KAP1Q8N8J0 262 aa9.68□□□□□ -0.86
USF3-201ENST00000316407 GNPTABQ3T906 1256 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 PAG1Q9NWQ8 432 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 ZNF445P59923 1031 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 STARD3NLO95772 234 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 DTHD1Q6ZMT9 781 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 IWS1Q96ST2 819 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 KRT23Q9C075 422 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 YIPF3Q9GZM5 350 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 TMEM87AQ8NBN3 555 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 RNF8O76064 485 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 IRX4P78413 519 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 GABPAQ06546 454 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 TAB3Q8N5C8 712 aaPredicted RBP9.67□□□□□ -0.86
USF3-201ENST00000316407 PPP4R1Q8TF05 950 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 SCOCQ9UIL1 159 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 PYCARDQ9ULZ3 195 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 CNGA1P29973 690 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 SKOR1P84550 965 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 GOLGA8FQ08AF8 430 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 GOLGA8DPQ0D2H9 430 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 AFAP1L2Q8N4X5 818 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 PPP2R2CQ9Y2T4 447 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 EFCAB8A8MWE9 144 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 GDAP1Q8TB36 358 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 CSRNP2Q9H175 543 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 KCNK3O14649 394 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 NR1I2O75469 434 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 KCNH3Q9ULD8 1083 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 KRIT1O00522 736 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 PLEKHM2Q8IWE5 1019 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 DPH5Q9H2P9 285 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 HELLSQ9NRZ9 838 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 AFG3L2Q9Y4W6 797 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 TTLL12Q14166 644 aaPredicted RBP9.67□□□□□ -0.86
USF3-201ENST00000316407 MED4Q9NPJ6 270 aa9.67□□□□□ -0.86
USF3-201ENST00000316407 EEF1B2P24534 225 aaKnown RBP9.66□□□□□ -0.86
USF3-201ENST00000316407 RPS6KA1Q15418 735 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 ANKRD36BQ8N2N9 1353 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 CSGALNACT2Q8N6G5 542 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 CENPKQ9BS16 269 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 PA2G4Q9UQ80 394 aaKnown RBP9.66□□□□□ -0.86
USF3-201ENST00000316407 ABCB4P21439 1286 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 TNNI2P48788 182 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 GUCY2DQ02846 1103 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 LRRC8AQ8IWT6 810 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 IQUBQ8NA54 791 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 ATP2A3Q93084 1043 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 SEPT10Q9P0V9 454 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms