RNA–Protein interactions for RNA: ENST00000315274.6

MMP1-201, Transcript of matrix metallopeptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP1, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1-201ENST00000315274 NBPF3Q9H094 633 aa11.31□□□□□ -0.6
MMP1-201ENST00000315274 PGAP2Q9UHJ9 254 aa11.31□□□□□ -0.6
MMP1-201ENST00000315274 FAM196BA6NMK8 535 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 ADM5C9JUS6 153 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 E7EWF7 191 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 PRDM1O75626 825 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 RRP12Q5JTH9 1297 aaKnown RBP11.3□□□□□ -0.6
MMP1-201ENST00000315274 NBPF12Q5TAG4 269 aaPredicted RBP11.3□□□□□ -0.6
MMP1-201ENST00000315274 MIGA2Q7L4E1 593 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 TBC1D10CQ8IV04 446 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 TEPSINQ96N21 525 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 TBC1D32Q96NH3 1257 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 SERPINB13Q9UIV8 391 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 ANAPC4Q9UJX5 808 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 RBM25P49756 843 aaKnown RBP11.3□□□□□ -0.6
MMP1-201ENST00000315274 PDE4BQ07343 736 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 TRDNQ13061 729 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 ADCK5Q3MIX3 580 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 AKNAD1Q5T1N1 836 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 CDC37L1Q7L3B6 337 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 FOXP4Q8IVH2 680 aaPredicted RBP11.3□□□□□ -0.6
MMP1-201ENST00000315274 SLC44A5Q8NCS7 719 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 GLIS2Q9BZE0 524 aaPredicted RBP11.3□□□□□ -0.6
MMP1-201ENST00000315274 MKNK2Q9HBH9 465 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 TACC3Q9Y6A5 838 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 ATRNL1Q5VV63 1379 aa11.3□□□□□ -0.6
MMP1-201ENST00000315274 DDX60LQ5H9U9 1706 aaKnown RBP11.29□□□□□ -0.6
MMP1-201ENST00000315274 LAMB1P07942 1786 aa11.29□□□□□ -0.6
MMP1-201ENST00000315274 CDK8P49336 464 aa11.29□□□□□ -0.6
MMP1-201ENST00000315274 KRT32Q14532 448 aa11.29□□□□□ -0.6
MMP1-201ENST00000315274 STOX1Q6ZVD7 989 aa11.29□□□□□ -0.6
MMP1-201ENST00000315274 LDHDQ86WU2 507 aa11.29□□□□□ -0.6
MMP1-201ENST00000315274 KCNB2Q92953 911 aa11.29□□□□□ -0.6
MMP1-201ENST00000315274 JAKMIP1Q96N16 626 aaKnown RBP11.29□□□□□ -0.6
MMP1-201ENST00000315274 RNF41Q9H4P4 317 aaPredicted RBP11.29□□□□□ -0.6
MMP1-201ENST00000315274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.29□□□□□ -0.6
MMP1-201ENST00000315274 PPP2R3BQ9Y5P8 575 aa11.29□□□□□ -0.6
MMP1-201ENST00000315274 LAMA4Q16363 1823 aa11.29□□□□□ -0.6
MMP1-201ENST00000315274 RANBP6O60518 1105 aaKnown RBP11.28□□□□□ -0.6
MMP1-201ENST00000315274 ANAPC15P60006 121 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 PRKG1Q13976 671 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 TSGA10IPQ3SY00 556 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 SUPT20HL1Q3ZLR7 823 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 C16orf86Q6ZW13 317 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 STAG1Q8WVM7 1258 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 ZNF287Q9HBT7 754 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 MYH8P13535 1937 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 NEDD4P46934 1319 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 B4E1Z4 1266 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 CASTP20810 708 aaKnown RBP11.28□□□□□ -0.6
MMP1-201ENST00000315274 RALYLQ86SE5 291 aaKnown RBP11.28□□□□□ -0.6
MMP1-201ENST00000315274 ZNF444Q8N0Y2 327 aaPredicted RBP11.28□□□□□ -0.6
MMP1-201ENST00000315274 NCOA7Q8NI08 942 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 NEK1Q96PY6 1258 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 EHD4Q9H223 541 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 FZD1Q9UP38 647 aa11.28□□□□□ -0.6
MMP1-201ENST00000315274 COL2A1P02458 1487 aaPredicted RBP11.28□□□□□ -0.6
MMP1-201ENST00000315274 TRAF5O00463 557 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 KDM4AO75164 1064 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 CPA1P15085 419 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 PSMA5P28066 241 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 GABPAQ06546 454 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 FAM47AQ5JRC9 791 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 HOOK2Q96ED9 719 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 CDCA5Q96FF9 252 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 UPF3BQ9BZI7 483 aaKnown RBP11.27□□□□□ -0.61
MMP1-201ENST00000315274 KRT23Q9C075 422 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 DNAJC18Q9H819 358 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 CNNM2Q9H8M5 875 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 SWAP70Q9UH65 585 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 HERC5Q9UII4 1024 aaKnown RBP11.27□□□□□ -0.61
MMP1-201ENST00000315274 SIPA1L1O43166 1804 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 ROBO3Q96MS0 1386 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 SHMT1P34896 483 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 FMR1Q06787 632 aaKnown RBP eCLIP11.27□□□□□ -0.61
MMP1-201ENST00000315274 COL9A3Q14050 684 aaPredicted RBP11.27□□□□□ -0.61
MMP1-201ENST00000315274 CHADLQ6NUI6 762 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 CHST3Q7LGC8 479 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 NKX2-3Q8TAU0 364 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 ESR2Q92731 530 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 ZNF408Q9H9D4 720 aa11.27□□□□□ -0.61
MMP1-201ENST00000315274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.27□□□□□ -0.61
MMP1-201ENST00000315274 TSPY2A6NKD2 308 aa11.26□□□□□ -0.61
MMP1-201ENST00000315274 MPHOSPH10O00566 681 aaKnown RBP11.26□□□□□ -0.61
MMP1-201ENST00000315274 ORC4O43929 436 aa11.26□□□□□ -0.61
MMP1-201ENST00000315274 TBC1D12O60347 775 aa11.26□□□□□ -0.61
MMP1-201ENST00000315274 FGRP09769 529 aa11.26□□□□□ -0.61
MMP1-201ENST00000315274 PCP11498 1178 aaKnown RBP11.26□□□□□ -0.61
MMP1-201ENST00000315274 RASA1P20936 1047 aa11.26□□□□□ -0.61
MMP1-201ENST00000315274 NF2P35240 595 aa11.26□□□□□ -0.61
MMP1-201ENST00000315274 CERKLQ49MI3 558 aaPredicted RBP11.26□□□□□ -0.61
MMP1-201ENST00000315274 DCAF15Q66K64 600 aa11.26□□□□□ -0.61
MMP1-201ENST00000315274 BLOC1S2Q6QNY1 142 aa11.26□□□□□ -0.61
MMP1-201ENST00000315274 METTL16Q86W50 562 aaKnown RBP11.26□□□□□ -0.61
MMP1-201ENST00000315274 ZNF784Q8NCA9 323 aaPredicted RBP11.26□□□□□ -0.61
MMP1-201ENST00000315274 TCEANC2Q96MN5 208 aa11.26□□□□□ -0.61
MMP1-201ENST00000315274 KIF2CQ99661 725 aa11.26□□□□□ -0.61
MMP1-201ENST00000315274 ZSWIM5Q9P217 1185 aa11.26□□□□□ -0.61
MMP1-201ENST00000315274 CYP46A1Q9Y6A2 500 aa11.26□□□□□ -0.61
MMP1-201ENST00000315274 KIF3CO14782 793 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms