RNA–Protein interactions for RNA: ENST00000311420.13

MDM2-204, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-204ENST00000311420 DPF3Q92784 378 aa13.24□□□□□ -0.29
MDM2-204ENST00000311420 UNC93B1Q9H1C4 597 aa13.24□□□□□ -0.29
MDM2-204ENST00000311420 C1orf115Q9H7X2 142 aa13.24□□□□□ -0.29
MDM2-204ENST00000311420 PNMA6EA0A0J9YXQ4 647 aa13.24□□□□□ -0.29
MDM2-204ENST00000311420 ADCY3O60266 1144 aa13.24□□□□□ -0.29
MDM2-204ENST00000311420 ELNP15502 786 aa13.24□□□□□ -0.29
MDM2-204ENST00000311420 RRP1BQ14684 758 aaKnown RBP13.24□□□□□ -0.29
MDM2-204ENST00000311420 TREML2Q5T2D2 321 aa13.24□□□□□ -0.29
MDM2-204ENST00000311420 NSUN4Q96CB9 384 aaKnown RBP13.24□□□□□ -0.29
MDM2-204ENST00000311420 CCDC136Q96JN2 1154 aa13.24□□□□□ -0.29
MDM2-204ENST00000311420 PCDHB15Q9Y5E8 787 aa13.24□□□□□ -0.29
MDM2-204ENST00000311420 RANBP2P49792 3224 aaKnown RBP13.23□□□□□ -0.29
MDM2-204ENST00000311420 TBC1D12O60347 775 aa13.23□□□□□ -0.29
MDM2-204ENST00000311420 GORABQ5T7V8 394 aa13.23□□□□□ -0.29
MDM2-204ENST00000311420 ANKRD13CQ8N6S4 541 aa13.23□□□□□ -0.29
MDM2-204ENST00000311420 NKX2-3Q8TAU0 364 aa13.23□□□□□ -0.29
MDM2-204ENST00000311420 U2AF1L4Q8WU68 220 aaKnown RBP13.23□□□□□ -0.29
MDM2-204ENST00000311420 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.23□□□□□ -0.29
MDM2-204ENST00000311420 SLC45A1Q9Y2W3 748 aa13.23□□□□□ -0.29
MDM2-204ENST00000311420 TRIOBPQ9H2D6 2365 aa13.22□□□□□ -0.29
MDM2-204ENST00000311420 SZT2Q5T011 3432 aa13.22□□□□□ -0.29
MDM2-204ENST00000311420 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
MDM2-204ENST00000311420 MCAMP43121 646 aa13.22□□□□□ -0.29
MDM2-204ENST00000311420 UBXN2AP68543 259 aa13.22□□□□□ -0.29
MDM2-204ENST00000311420 SPP2Q13103 211 aa13.22□□□□□ -0.29
MDM2-204ENST00000311420 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
MDM2-204ENST00000311420 RPAP2Q8IXW5 612 aaPredicted RBP13.22□□□□□ -0.29
MDM2-204ENST00000311420 SLAIN1Q8ND83 568 aa13.22□□□□□ -0.29
MDM2-204ENST00000311420 SMCR8Q8TEV9 937 aaPredicted RBP13.22□□□□□ -0.29
MDM2-204ENST00000311420 RAI14Q9P0K7 980 aa13.22□□□□□ -0.29
MDM2-204ENST00000311420 AGTPBP1Q9UPW5 1226 aa13.22□□□□□ -0.29
MDM2-204ENST00000311420 AK9Q5TCS8 1911 aa13.22□□□□□ -0.29
MDM2-204ENST00000311420 TNPO2O14787 897 aaKnown RBP13.21□□□□□ -0.29
MDM2-204ENST00000311420 B4GALNT3Q6L9W6 998 aa13.21□□□□□ -0.29
MDM2-204ENST00000311420 CEP85Q6P2H3 762 aa13.21□□□□□ -0.29
MDM2-204ENST00000311420 SGPL1O95470 568 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 INHAP05111 366 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 LDHCP07864 332 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 ARID4AP29374 1257 aaPredicted RBP13.2□□□□□ -0.3
MDM2-204ENST00000311420 GSTO1P78417 241 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 G3BP1Q13283 466 aaKnown RBP eCLIP13.2□□□□□ -0.3
MDM2-204ENST00000311420 SH3RF3Q8TEJ3 882 aaPredicted RBP13.2□□□□□ -0.3
MDM2-204ENST00000311420 OSBPL5Q9H0X9 879 aaPredicted RBP13.2□□□□□ -0.3
MDM2-204ENST00000311420 RWDD1Q9H446 243 aaPredicted RBP13.2□□□□□ -0.3
MDM2-204ENST00000311420 SNRKQ9NRH2 765 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 LRP2BPQ9P2M1 347 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 RBM27Q9P2N5 1060 aaKnown RBP13.2□□□□□ -0.3
MDM2-204ENST00000311420 TAOK2Q9UL54 1235 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 CAP2P40123 477 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 HMGCS2P54868 508 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 JAG1P78504 1218 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 IRF5Q13568 498 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 TEX11Q8IYF3 940 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 ZNF280CQ8ND82 737 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 PXYLP1Q8TE99 480 aa13.2□□□□□ -0.3
MDM2-204ENST00000311420 MYH2Q9UKX2 1941 aa13.19□□□□□ -0.3
MDM2-204ENST00000311420 MYH13Q9UKX3 1938 aa13.19□□□□□ -0.3
MDM2-204ENST00000311420 HMMRO75330 724 aa13.19□□□□□ -0.3
MDM2-204ENST00000311420 FARP2O94887 1054 aaPredicted RBP13.19□□□□□ -0.3
MDM2-204ENST00000311420 TFRCP02786 760 aaKnown RBP13.19□□□□□ -0.3
MDM2-204ENST00000311420 ATP8B2P98198 1209 aa13.19□□□□□ -0.3
MDM2-204ENST00000311420 HDAC1Q13547 482 aaPredicted RBP13.19□□□□□ -0.3
MDM2-204ENST00000311420 DEFB118Q96PH6 123 aa13.19□□□□□ -0.3
MDM2-204ENST00000311420 USP17L5A8MUK1 530 aa13.18□□□□□ -0.3
MDM2-204ENST00000311420 MAP4K4O95819 1239 aaPredicted RBP13.18□□□□□ -0.3
MDM2-204ENST00000311420 ADGRA1Q86SQ6 560 aa13.18□□□□□ -0.3
MDM2-204ENST00000311420 SIRT2Q8IXJ6 389 aa13.18□□□□□ -0.3
MDM2-204ENST00000311420 PROCA1Q8NCQ7 364 aaPredicted RBP13.18□□□□□ -0.3
MDM2-204ENST00000311420 COA7Q96BR5 231 aa13.18□□□□□ -0.3
MDM2-204ENST00000311420 HTATIP2Q9BUP3 242 aa13.18□□□□□ -0.3
MDM2-204ENST00000311420 ASCC2Q9H1I8 757 aaPredicted RBP13.18□□□□□ -0.3
MDM2-204ENST00000311420 PEX10O60683 326 aa13.17□□□□□ -0.3
MDM2-204ENST00000311420 UQCRFS1P1P0C7P4 283 aa13.17□□□□□ -0.3
MDM2-204ENST00000311420 FAM110CQ1W6H9 321 aa13.17□□□□□ -0.3
MDM2-204ENST00000311420 SHROOM1Q2M3G4 852 aaPredicted RBP13.17□□□□□ -0.3
MDM2-204ENST00000311420 TGFBRAP1Q8WUH2 860 aa13.17□□□□□ -0.3
MDM2-204ENST00000311420 DBNDD2Q9BQY9 259 aa13.17□□□□□ -0.3
MDM2-204ENST00000311420 PRO3102Q9H379 93 aa13.17□□□□□ -0.3
MDM2-204ENST00000311420 PAK6Q9NQU5 681 aaPredicted RBP13.17□□□□□ -0.3
MDM2-204ENST00000311420 AATFQ9NY61 560 aaKnown RBP eCLIP13.17□□□□□ -0.3
MDM2-204ENST00000311420 PI4KBQ9UBF8 816 aa13.17□□□□□ -0.3
MDM2-204ENST00000311420 GJD2Q9UKL4 321 aa13.17□□□□□ -0.3
MDM2-204ENST00000311420 PNMA3Q9UL41 463 aa13.17□□□□□ -0.3
MDM2-204ENST00000311420 IGHDP01880 384 aa13.16□□□□□ -0.3
MDM2-204ENST00000311420 CYP2E1P05181 493 aaPredicted RBP13.16□□□□□ -0.3
MDM2-204ENST00000311420 TRIM32Q13049 653 aa13.16□□□□□ -0.3
MDM2-204ENST00000311420 POLA2Q14181 598 aa13.16□□□□□ -0.3
MDM2-204ENST00000311420 TNNI3KQ59H18 835 aa13.16□□□□□ -0.3
MDM2-204ENST00000311420 SH3D19Q5HYK7 790 aa13.16□□□□□ -0.3
MDM2-204ENST00000311420 NAA16Q6N069 864 aaPredicted RBP13.16□□□□□ -0.3
MDM2-204ENST00000311420 MAPKAPK5Q8IW41 473 aa13.16□□□□□ -0.3
MDM2-204ENST00000311420 DNAJC18Q9H819 358 aa13.16□□□□□ -0.3
MDM2-204ENST00000311420 FPGT-TNNI3KV9GXZ4 949 aa13.16□□□□□ -0.3
MDM2-204ENST00000311420 GCLCP48506 637 aaPredicted RBP13.15□□□□□ -0.3
MDM2-204ENST00000311420 PPP4CP60510 307 aa13.15□□□□□ -0.3
MDM2-204ENST00000311420 TTC39AQ5SRH9 613 aa13.15□□□□□ -0.3
MDM2-204ENST00000311420 CENPQQ7L2Z9 268 aaPredicted RBP13.15□□□□□ -0.3
MDM2-204ENST00000311420 SSH3Q8TE77 659 aa13.15□□□□□ -0.3
MDM2-204ENST00000311420 PAWRQ96IZ0 340 aaKnown RBP13.15□□□□□ -0.3
MDM2-204ENST00000311420 CRISPLD2Q9H0B8 497 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms