RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 CACNA1SQ13698 1873 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 ANKRD31Q8N7Z5 1873 aa13□□□□□ -0.33
TRIM59-201ENST00000309784 TFAP4Q01664 338 aa13□□□□□ -0.33
TRIM59-201ENST00000309784 CATIPQ7Z7H3 387 aa13□□□□□ -0.33
TRIM59-201ENST00000309784 HDAC9Q9UKV0 1011 aa13□□□□□ -0.33
TRIM59-201ENST00000309784 GPR75-ASB3A0A0A6YYF3 556 aa13□□□□□ -0.33
TRIM59-201ENST00000309784 VEZTQ9HBM0 779 aa13□□□□□ -0.33
TRIM59-201ENST00000309784 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
TRIM59-201ENST00000309784 GJA3Q9Y6H8 435 aa13□□□□□ -0.33
TRIM59-201ENST00000309784 HLA-DOAP06340 250 aa13□□□□□ -0.33
TRIM59-201ENST00000309784 TRIM29Q14134 588 aa13□□□□□ -0.33
TRIM59-201ENST00000309784 APOA5Q6Q788 366 aa13□□□□□ -0.33
TRIM59-201ENST00000309784 ALDH8A1Q9H2A2 487 aaPredicted RBP13□□□□□ -0.33
TRIM59-201ENST00000309784 TRAK2O60296 914 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 CDKL5O76039 1030 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 CEBPZQ03701 1054 aaKnown RBP12.99□□□□□ -0.33
TRIM59-201ENST00000309784 TMED8Q6PL24 325 aaPredicted RBP12.99□□□□□ -0.33
TRIM59-201ENST00000309784 TMTC2Q8N394 836 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 SLC26A6Q9BXS9 759 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 ZMYM6O95789 1325 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 GOLGA6L4A6NEF3 574 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 DDIT3P35638 169 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 RTN1Q16799 776 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 TTC6Q86TZ1 520 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 TRIM22Q8IYM9 498 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 CMTR1Q8N1G2 835 aaKnown RBP12.99□□□□□ -0.33
TRIM59-201ENST00000309784 PHKBQ93100 1093 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 ZSCAN10Q96SZ4 725 aaPredicted RBP12.99□□□□□ -0.33
TRIM59-201ENST00000309784 SLX4Q8IY92 1834 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 NMT2O60551 498 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 BRD1O95696 1058 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 IARSP41252 1262 aaKnown RBP12.99□□□□□ -0.33
TRIM59-201ENST00000309784 PLCD1P51178 756 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 ST3GAL1Q11201 340 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 SPON1Q9HCB6 807 aa12.99□□□□□ -0.33
TRIM59-201ENST00000309784 F13A1P00488 732 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 PPP4CP60510 307 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 CDC37L1Q7L3B6 337 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 NKX2-3Q8TAU0 364 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 C8orf76Q96K31 380 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 KAT14Q9H8E8 782 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 FLT1P17948 1338 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 FAM173BQ6P4H8 233 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 CTCFLQ8NI51 663 aaPredicted RBP12.98□□□□□ -0.33
TRIM59-201ENST00000309784 SUGT1Q9Y2Z0 365 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 CLRN2A0PK11 232 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 C12orf60Q5U649 245 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 OTUD7BQ6GQQ9 843 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 C10orf71Q711Q0 1435 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 NSUN7Q8NE18 718 aaKnown RBP12.98□□□□□ -0.33
TRIM59-201ENST00000309784 C7orf43Q8WVR3 580 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 TDRD3Q9H7E2 651 aaKnown RBP12.98□□□□□ -0.33
TRIM59-201ENST00000309784 LY9Q9HBG7 655 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 ZDHHC9Q9Y397 364 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 PCDHAC2Q9Y5I4 1007 aa12.98□□□□□ -0.33
TRIM59-201ENST00000309784 PSMD14O00487 310 aa12.97□□□□□ -0.33
TRIM59-201ENST00000309784 EIF6P56537 245 aaKnown RBP12.97□□□□□ -0.33
TRIM59-201ENST00000309784 DLGAP5Q15398 846 aa12.97□□□□□ -0.33
TRIM59-201ENST00000309784 CFAP100Q494V2 611 aa12.97□□□□□ -0.33
TRIM59-201ENST00000309784 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
TRIM59-201ENST00000309784 ZNF654Q8IZM8 581 aa12.97□□□□□ -0.33
TRIM59-201ENST00000309784 CCDC196A0A1B0GTZ2 297 aa12.97□□□□□ -0.33
TRIM59-201ENST00000309784 DACT2Q5SW24 774 aa12.97□□□□□ -0.33
TRIM59-201ENST00000309784 ARHGAP27Q6ZUM4 889 aa12.97□□□□□ -0.33
TRIM59-201ENST00000309784 IGDCC4Q8TDY8 1250 aa12.97□□□□□ -0.33
TRIM59-201ENST00000309784 PTMSP20962 102 aa12.97□□□□□ -0.33
TRIM59-201ENST00000309784 CDC42EP5Q6NZY7 148 aa12.97□□□□□ -0.33
TRIM59-201ENST00000309784 LLPHQ9BRT6 129 aaKnown RBP12.97□□□□□ -0.33
TRIM59-201ENST00000309784 TACC3Q9Y6A5 838 aa12.97□□□□□ -0.33
TRIM59-201ENST00000309784 SSRP1Q08945 709 aaKnown RBP12.96□□□□□ -0.33
TRIM59-201ENST00000309784 TCP10L2B9ZVM9 353 aa12.96□□□□□ -0.33
TRIM59-201ENST00000309784 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
TRIM59-201ENST00000309784 TFIP11Q9UBB9 837 aaKnown RBP12.96□□□□□ -0.33
TRIM59-201ENST00000309784 MTMR6Q9Y217 621 aa12.96□□□□□ -0.33
TRIM59-201ENST00000309784 BAZ2AQ9UIF9 1905 aaKnown RBP12.96□□□□□ -0.33
TRIM59-201ENST00000309784 RGPD3A6NKT7 1758 aaPredicted RBP12.96□□□□□ -0.33
TRIM59-201ENST00000309784 RGPD4Q7Z3J3 1758 aa12.96□□□□□ -0.33
TRIM59-201ENST00000309784 KCNA3P22001 575 aa12.96□□□□□ -0.34
TRIM59-201ENST00000309784 LIFRP42702 1097 aa12.96□□□□□ -0.34
TRIM59-201ENST00000309784 DNM1Q05193 864 aaKnown RBP12.96□□□□□ -0.34
TRIM59-201ENST00000309784 ENAHQ8N8S7 591 aaPredicted RBP12.96□□□□□ -0.34
TRIM59-201ENST00000309784 ALG1Q9BT22 464 aa12.96□□□□□ -0.34
TRIM59-201ENST00000309784 ANAPC4Q9UJX5 808 aa12.96□□□□□ -0.34
TRIM59-201ENST00000309784 ZNRF3Q9ULT6 936 aa12.96□□□□□ -0.34
TRIM59-201ENST00000309784 CNPY2Q9Y2B0 182 aa12.96□□□□□ -0.34
TRIM59-201ENST00000309784 COL11A2P13942 1736 aaPredicted RBP12.96□□□□□ -0.34
TRIM59-201ENST00000309784 YDJCA8MPS7 323 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 PCP11498 1178 aaKnown RBP12.95□□□□□ -0.34
TRIM59-201ENST00000309784 CDK8P49336 464 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 NFIAQ12857 509 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 SBK1Q52WX2 424 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 NLGN2Q8NFZ4 835 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 hCG_1642624A0A1W2PR95 340 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 FAM196BA6NMK8 535 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 MYO1BO43795 1136 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 IGSF3O75054 1194 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 RHBDL3P58872 404 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 RASSF7Q02833 373 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 CIAPIN1Q6FI81 312 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 HHIPL2Q6UWX4 724 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms