RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SLC8A3P57103 927 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 CEP112Q8N8E3 955 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 INTS4Q96HW7 963 aaKnown RBP9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 CCDC77Q9BR77 488 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 TCHPQ9BT92 498 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 ANGEL1Q9UNK9 670 aaKnown RBP9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 LRRC7Q96NW7 1537 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 GNPTABQ3T906 1256 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 HS2ST1Q7LGA3 356 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 SMC1BQ8NDV3 1235 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 DDX17Q92841 729 aaKnown RBP9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 CACYBPQ9HB71 228 aaKnown RBP9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 LGR6Q9HBX8 967 aa9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 TTF2Q9UNY4 1162 aaKnown RBP9.38□□□□□ -0.91
PCDHB1-201ENST00000306549 CPDO75976 1380 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 KLF18A0A0U1RQI7 1052 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 RAB3GAP1Q15042 981 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 HEATR3Q7Z4Q2 680 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 KIF18AQ8NI77 898 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 USP25Q9UHP3 1055 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 RBM8AQ9Y5S9 174 aaKnown RBP9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 USP19O94966 1318 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 CHD2O14647 1828 aaKnown RBP9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 TRIM75PA6NK02 468 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 ATP5JP18859 108 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 CD163L1Q9NR16 1453 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 M0QZ92 97 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 IREB2P48200 963 aaKnown RBP9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 DAAM2Q86T65 1068 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 SPON1Q9HCB6 807 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 NARFQ9UHQ1 456 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 TRIM35Q9UPQ4 493 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 SERPINB2P05120 415 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 CCDC184Q52MB2 194 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 IWS1Q96ST2 819 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 STMN4Q9H169 189 aaPredicted RBP9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 PTPRUQ92729 1446 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 BICDL2A1A5D9 508 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 CNGA1P29973 690 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 PTPN14Q15678 1187 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 KRT26Q7Z3Y9 468 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 FAM208AQ9UK61 1670 aaKnown RBP9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 VWDEQ8N2E2 1590 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 HOXA7P31268 230 aaPredicted RBP9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 KRT79Q5XKE5 535 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 ALG1Q9BT22 464 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 NRKQ7Z2Y5 1582 aa9.37□□□□□ -0.91
PCDHB1-201ENST00000306549 NOP56O00567 594 aaKnown RBP9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 FBF1Q8TES7 1133 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 NEMFO60524 1076 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 RPL13P26373 211 aaKnown RBP9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 STAT6P42226 847 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 PSMC4P43686 418 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 KMT5BQ4FZB7 885 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 SELENOOQ9BVL4 669 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 VAT1LQ9HCJ6 419 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 BAZ2BQ9UIF8 2168 aaKnown RBP9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 H0YCG3 227 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 ATP8A2Q9NTI2 1148 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 COPB2P35606 906 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 TRMT1LQ7Z2T5 733 aaKnown RBP9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 COA1Q9GZY4 146 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 NSRP1Q9H0G5 558 aaKnown RBP9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 KDM2BQ8NHM5 1336 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 DEXIO95424 95 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 ATP2A2P16615 1042 aaKnown RBP9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 DNM2P50570 870 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 UBE2HP62256 183 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 DTHD1Q6ZMT9 781 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 APOBEC3FQ8IUX4 373 aaKnown RBP9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 PPP1R9BQ96SB3 815 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 SLC17A8Q8NDX2 589 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 DSCC1Q9BVC3 393 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 RTEL1Q9NZ71 1219 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 LTN1O94822 1766 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 GPATCH4Q5T3I0 446 aaKnown RBP9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 HAUS7Q99871 368 aa9.36□□□□□ -0.91
PCDHB1-201ENST00000306549 COPRSQ9NQ92 184 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 PDE8BO95263 885 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 DNA2P51530 1060 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 RILPL1Q5EBL4 403 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 IL17REQ8NFR9 667 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 SMC6Q96SB8 1091 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 NWD1Q149M9 1564 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 USP17L3A6NCW0 530 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 USP17L4A6NCW7 530 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 PLCD1P51178 756 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 GSDMDP57764 484 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 MXRA7P84157 204 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 KIF5AQ12840 1032 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 USP17L1Q7RTZ2 530 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 CCT6BQ92526 530 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 GOLGA1Q92805 767 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 CDHR1Q96JP9 859 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 IFT74Q96LB3 600 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 ADD3Q9UEY8 706 aaKnown RBP9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 PSMA7O14818 248 aa9.35□□□□□ -0.91
PCDHB1-201ENST00000306549 EAPPQ56P03 285 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms