RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 FAM227BQ96M60 508 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 VWA3BQ502W6 1294 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 SND1Q7KZF4 910 aaKnown RBP eCLIP18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 SEC62Q99442 399 aaKnown RBP18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 MRVI1Q9Y6F6 885 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 A2ML1A8K2U0 1454 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 FAM135BQ49AJ0 1406 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 BUB1BO60566 1050 aaPredicted RBP18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 DEXIO95424 95 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 PLCD1P51178 756 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 PPP1R7Q15435 360 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 CROCCP2Q86T23 111 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 NOX5Q96PH1 765 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 RBM28Q9NW13 759 aaKnown RBP18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 MYOM2P54296 1465 aa18.43■□□□□ 0.54
SNAPC4-201ENST00000298532 PAK1Q13153 545 aa18.43■□□□□ 0.54
SNAPC4-201ENST00000298532 WHAMMP3Q1A5X7 153 aa18.43■□□□□ 0.54
SNAPC4-201ENST00000298532 TMEM110-MUSTN1A8MSY1 372 aa18.43■□□□□ 0.54
SNAPC4-201ENST00000298532 ATP6V0A2Q9Y487 856 aa18.43■□□□□ 0.54
SNAPC4-201ENST00000298532 ACTN4O43707 911 aaKnown RBP18.43■□□□□ 0.54
SNAPC4-201ENST00000298532 SLC4A8Q2Y0W8 1093 aa18.43■□□□□ 0.54
SNAPC4-201ENST00000298532 RABEP2Q9H5N1 569 aa18.43■□□□□ 0.54
SNAPC4-201ENST00000298532 ZNF174Q15697 407 aa18.43■□□□□ 0.54
SNAPC4-201ENST00000298532 CCDC51Q96ER9 411 aa18.43■□□□□ 0.54
SNAPC4-201ENST00000298532 ANTXR1Q9H6X2 564 aa18.43■□□□□ 0.54
SNAPC4-201ENST00000298532 GNA11P29992 359 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 PCK1P35558 622 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 ZC3H12CQ9C0D7 883 aaKnown RBP18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 SAMM50Q9Y512 469 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 HS2ST1Q7LGA3 356 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 RGS22Q8NE09 1264 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 GOLGA5Q8TBA6 731 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 STMN2Q93045 179 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 KIAA1468Q9P260 1216 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 PYCARDQ9ULZ3 195 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 MAGEB6P1A0A0J9YX57 407 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 APBA3O96018 575 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 RXRBP28702 533 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 PAXIP1Q6ZW49 1069 aaPredicted RBP18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 ANGEL1Q9UNK9 670 aaKnown RBP18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 POSTNQ15063 836 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 MTMR6Q9Y217 621 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 ABCC3O15438 1527 aa18.42■□□□□ 0.54
SNAPC4-201ENST00000298532 JAK2O60674 1132 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 RAPGEF1Q13905 1077 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 ADALQ6DHV7 355 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 OTUD7BQ6GQQ9 843 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 DDX21Q9NR30 783 aaKnown RBP eCLIP18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 WWC3Q9ULE0 1092 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 CHL1O00533 1208 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 TRAF1Q13077 416 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 ME3Q16798 604 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 SEL1L2Q5TEA6 688 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 DIS3L2Q8IYB7 885 aaKnown RBP18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 CSGALNACT2Q8N6G5 542 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 SLF1Q9BQI6 1058 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 QTRT2Q9H974 415 aaKnown RBP18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 PNMA6EA0A0J9YXQ4 647 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 PSDA5PKW4 1024 aaPredicted RBP18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 PPFIA4O75335 1185 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 SARNPP82979 210 aaKnown RBP18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 CNBD1Q8NA66 436 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 PLIN2Q99541 437 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.41■□□□□ 0.544e-6■■■■■ 36.8
SNAPC4-201ENST00000298532 TSKSQ9UJT2 592 aa18.41■□□□□ 0.54
SNAPC4-201ENST00000298532 PLCB3Q01970 1234 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 SV2BQ7L1I2 683 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 CACNA2D3Q8IZS8 1091 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 NR1I2O75469 434 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 RPL13P26373 211 aaKnown RBP18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 PDE4DQ08499 809 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 TNNI3KQ59H18 835 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 TRMT1LQ7Z2T5 733 aaKnown RBP18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 PNMA8AQ86V59 439 aaPredicted RBP18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 CCDC87Q9NVE4 849 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 UTP11Q9Y3A2 253 aaKnown RBP18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 FPGT-TNNI3KV9GXZ4 949 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 PTPRTO14522 1441 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 TRAF5O00463 557 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 ATP8B1O43520 1251 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 MAGEA1P43355 309 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 ZNF790Q6PG37 636 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 SHROOM2Q13796 1616 aa18.4■□□□□ 0.54
SNAPC4-201ENST00000298532 EEF2P13639 858 aaKnown RBP18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 RRP36Q96EU6 259 aaKnown RBP18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 SAR1BQ9Y6B6 198 aa18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 CFAP221Q4G0U5 840 aa18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 CNNM4Q6P4Q7 775 aa18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 BICD1Q96G01 975 aa18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 MED4Q9NPJ6 270 aa18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 TAB2Q9NYJ8 693 aa18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 MAGEB6Q8N7X4 407 aa18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 IQSEC3Q9UPP2 1182 aaPredicted RBP18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 PPP2R2CQ9Y2T4 447 aa18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 ABCC4O15439 1325 aa18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 ATP2A2P16615 1042 aaKnown RBP18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 FAM196AQ6ZSG2 479 aa18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 SLC52A2Q9HAB3 445 aa18.39■□□□□ 0.53
SNAPC4-201ENST00000298532 RGS12O14924 1447 aa18.38■□□□□ 0.53
SNAPC4-201ENST00000298532 GBP1P32455 592 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms