RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 LLPHQ9BRT6 129 aaKnown RBP28.22■■■□□ 2.11
SHISA5-201ENST00000296444 QSER1Q2KHR3 1735 aa28.21■■■□□ 2.11
SHISA5-201ENST00000296444 G3V3G9 751 aa28.21■■■□□ 2.11
SHISA5-201ENST00000296444 FGRP09769 529 aa28.21■■■□□ 2.11
SHISA5-201ENST00000296444 METAP2P50579 478 aaKnown RBP eCLIP28.21■■■□□ 2.112e-7■□□□□ 8.9
SHISA5-201ENST00000296444 DCAF8Q5TAQ9 597 aa28.21■■■□□ 2.11
SHISA5-201ENST00000296444 TNKSO95271 1327 aa28.21■■■□□ 2.11
SHISA5-201ENST00000296444 GOLGA6L22H0YM25 854 aa28.21■■■□□ 2.11
SHISA5-201ENST00000296444 TPM2P07951 284 aa28.21■■■□□ 2.11
SHISA5-201ENST00000296444 R3HDM1Q15032 1099 aaKnown RBP28.21■■■□□ 2.11
SHISA5-201ENST00000296444 C12orf60Q5U649 245 aa28.21■■■□□ 2.11
SHISA5-201ENST00000296444 ECE2O60344 883 aa28.2■■■□□ 2.1
SHISA5-201ENST00000296444 GSTO1P78417 241 aa28.2■■■□□ 2.1
SHISA5-201ENST00000296444 NTRK3Q16288 839 aa28.2■■■□□ 2.1
SHISA5-201ENST00000296444 C10orf71Q711Q0 1435 aa28.2■■■□□ 2.1
SHISA5-201ENST00000296444 TMX4Q9H1E5 349 aaPredicted RBP28.2■■■□□ 2.1
SHISA5-201ENST00000296444 LIFRP42702 1097 aa28.19■■■□□ 2.1
SHISA5-201ENST00000296444 KIAA0825Q8IV33 1275 aa28.19■■■□□ 2.1
SHISA5-201ENST00000296444 TEX11Q8IYF3 940 aa28.19■■■□□ 2.1
SHISA5-201ENST00000296444 TRIM44Q96DX7 344 aaPredicted RBP28.19■■■□□ 2.1
SHISA5-201ENST00000296444 FTOQ9C0B1 505 aaKnown RBP eCLIP28.19■■■□□ 2.1
SHISA5-201ENST00000296444 DDX4Q9NQI0 724 aaKnown RBP28.19■■■□□ 2.1
SHISA5-201ENST00000296444 YDJCA8MPS7 323 aa28.19■■■□□ 2.1
SHISA5-201ENST00000296444 ZBTB43O43298 467 aa28.19■■■□□ 2.1
SHISA5-201ENST00000296444 BAG3O95817 575 aa28.19■■■□□ 2.1
SHISA5-201ENST00000296444 WTAPQ15007 396 aa28.19■■■□□ 2.1
SHISA5-201ENST00000296444 RNF41Q9H4P4 317 aaPredicted RBP28.19■■■□□ 2.1
SHISA5-201ENST00000296444 KIAA1551Q9HCM1 1747 aa28.19■■■□□ 2.1
SHISA5-201ENST00000296444 GAKO14976 1311 aa28.18■■■□□ 2.1
SHISA5-201ENST00000296444 TBC1D22AQ8WUA7 517 aa28.18■■■□□ 2.1
SHISA5-201ENST00000296444 ESR2Q92731 530 aa28.18■■■□□ 2.1
SHISA5-201ENST00000296444 ORC3Q9UBD5 711 aaPredicted RBP28.18■■■□□ 2.1
SHISA5-201ENST00000296444 SLC12A7Q9Y666 1083 aa28.18■■■□□ 2.1
SHISA5-201ENST00000296444 SBK1Q52WX2 424 aa28.18■■■□□ 2.1
SHISA5-201ENST00000296444 CAVIN1Q6NZI2 390 aaKnown RBP28.18■■■□□ 2.1
SHISA5-201ENST00000296444 PPP1R1BQ9UD71 204 aaPredicted RBP28.18■■■□□ 2.1
SHISA5-201ENST00000296444 LDHCP07864 332 aa28.17■■■□□ 2.1
SHISA5-201ENST00000296444 GUCY1A2P33402 732 aa28.17■■■□□ 2.1
SHISA5-201ENST00000296444 RESTQ13127 1097 aa28.17■■■□□ 2.1
SHISA5-201ENST00000296444 PICALMQ13492 652 aa28.17■■■□□ 2.1
SHISA5-201ENST00000296444 ILDR1Q86SU0 546 aaPredicted RBP28.17■■■□□ 2.1
SHISA5-201ENST00000296444 NUP133Q8WUM0 1156 aa28.17■■■□□ 2.1
SHISA5-201ENST00000296444 FAM163AQ96GL9 167 aaPredicted RBP28.17■■■□□ 2.1
SHISA5-201ENST00000296444 CDK5RAP2Q96SN8 1893 aa28.17■■■□□ 2.1
SHISA5-201ENST00000296444 CCDC69A6NI79 296 aa28.17■■■□□ 2.1
SHISA5-201ENST00000296444 CACNB3P54284 484 aa28.17■■■□□ 2.1
SHISA5-201ENST00000296444 ZSCAN10Q96SZ4 725 aaPredicted RBP28.17■■■□□ 2.1
SHISA5-201ENST00000296444 FLT1P17948 1338 aa28.16■■■□□ 2.1
SHISA5-201ENST00000296444 PSDA5PKW4 1024 aaPredicted RBP28.16■■■□□ 2.1
SHISA5-201ENST00000296444 GOLGA8AA7E2F4 631 aa28.16■■■□□ 2.1
SHISA5-201ENST00000296444 H3BQV1 296 aa28.16■■■□□ 2.1
SHISA5-201ENST00000296444 CPLX1O14810 134 aa28.16■■■□□ 2.1
SHISA5-201ENST00000296444 PDCP20941 246 aa28.16■■■□□ 2.1
SHISA5-201ENST00000296444 IFFO2Q5TF58 517 aa28.16■■■□□ 2.1
SHISA5-201ENST00000296444 GAS2L3Q86XJ1 694 aa28.16■■■□□ 2.1
SHISA5-201ENST00000296444 TTLL6Q8N841 843 aa28.16■■■□□ 2.1
SHISA5-201ENST00000296444 UBAC1Q9BSL1 405 aa28.16■■■□□ 2.1
SHISA5-201ENST00000296444 KLHL40Q2TBA0 621 aa28.16■■■□□ 2.1
SHISA5-201ENST00000296444 ZNF277Q9NRM2 450 aaPredicted RBP28.16■■■□□ 2.1
SHISA5-201ENST00000296444 IL17RBQ9NRM6 502 aa28.16■■■□□ 2.1
SHISA5-201ENST00000296444 ARPP21Q9UBL0 812 aaPredicted RBP28.16■■■□□ 2.1
SHISA5-201ENST00000296444 DACT2Q5SW24 774 aa28.15■■■□□ 2.1
SHISA5-201ENST00000296444 EYA3Q99504 573 aa28.15■■■□□ 2.1
SHISA5-201ENST00000296444 BAZ2BQ9UIF8 2168 aaKnown RBP28.15■■■□□ 2.1
SHISA5-201ENST00000296444 USP17L3A6NCW0 530 aa28.15■■■□□ 2.1
SHISA5-201ENST00000296444 USP17L4A6NCW7 530 aa28.15■■■□□ 2.1
SHISA5-201ENST00000296444 USP17L1Q7RTZ2 530 aa28.15■■■□□ 2.1
SHISA5-201ENST00000296444 ZFPM1Q8IX07 1006 aa28.15■■■□□ 2.1
SHISA5-201ENST00000296444 TMEM63CQ9P1W3 806 aa28.15■■■□□ 2.1
SHISA5-201ENST00000296444 COL4A5P29400 1685 aa28.14■■■□□ 2.1
SHISA5-201ENST00000296444 hCG_1642624A0A1W2PR95 340 aa28.14■■■□□ 2.1
SHISA5-201ENST00000296444 APOBEC3HQ6NTF7 200 aaKnown RBP28.14■■■□□ 2.1
SHISA5-201ENST00000296444 PODNQ7Z5L7 613 aa28.14■■■□□ 2.1
SHISA5-201ENST00000296444 CEBPZQ03701 1054 aaKnown RBP28.14■■■□□ 2.09
SHISA5-201ENST00000296444 NFIAQ12857 509 aa28.14■■■□□ 2.09
SHISA5-201ENST00000296444 TTC6Q86TZ1 520 aa28.14■■■□□ 2.09
SHISA5-201ENST00000296444 ZNF654Q8IZM8 581 aa28.14■■■□□ 2.09
SHISA5-201ENST00000296444 HMGN5P82970 282 aaKnown RBP28.13■■■□□ 2.09
SHISA5-201ENST00000296444 NOL10Q9BSC4 688 aaKnown RBP28.13■■■□□ 2.09
SHISA5-201ENST00000296444 WDHD1O75717 1129 aaPredicted RBP28.13■■■□□ 2.09
SHISA5-201ENST00000296444 POLR3DP05423 398 aaPredicted RBP28.13■■■□□ 2.09
SHISA5-201ENST00000296444 RCSD1Q6JBY9 416 aa28.13■■■□□ 2.09
SHISA5-201ENST00000296444 PPIP5K2O43314 1243 aa28.12■■■□□ 2.09
SHISA5-201ENST00000296444 ORC4O43929 436 aa28.12■■■□□ 2.09
SHISA5-201ENST00000296444 TFAP4Q01664 338 aa28.12■■■□□ 2.09
SHISA5-201ENST00000296444 RASGRP2Q7LDG7 609 aa28.12■■■□□ 2.09
SHISA5-201ENST00000296444 KIAA2012Q0VF49 1180 aa28.11■■■□□ 2.09
SHISA5-201ENST00000296444 SLC16A10Q8TF71 515 aa28.11■■■□□ 2.09
SHISA5-201ENST00000296444 ZMYND15Q9H091 742 aa28.11■■■□□ 2.09
SHISA5-201ENST00000296444 KIF28PB7ZC32 967 aa28.11■■■□□ 2.09
SHISA5-201ENST00000296444 CDC42EP5Q6NZY7 148 aa28.11■■■□□ 2.09
SHISA5-201ENST00000296444 KLHL34Q8N239 644 aa28.11■■■□□ 2.09
SHISA5-201ENST00000296444 USP40Q9NVE5 1235 aa28.11■■■□□ 2.09
SHISA5-201ENST00000296444 ERICH2A1L162 156 aa28.1■■■□□ 2.09
SHISA5-201ENST00000296444 TSPY2A6NKD2 308 aa28.1■■■□□ 2.09
SHISA5-201ENST00000296444 SART3Q15020 963 aaKnown RBP28.1■■■□□ 2.09
SHISA5-201ENST00000296444 FANCBQ8NB91 859 aa28.1■■■□□ 2.09
SHISA5-201ENST00000296444 SLC26A6Q9BXS9 759 aa28.1■■■□□ 2.09
SHISA5-201ENST00000296444 IFIT1BQ5T764 474 aaKnown RBP28.09■■■□□ 2.09
SHISA5-201ENST00000296444 SHISA4Q96DD7 197 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms