RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 MAST2Q6P0Q8 1798 aa24.07■■□□□ 1.44
CXCL3-201ENST00000296026 PRKCZQ05513 592 aa24.07■■□□□ 1.44
CXCL3-201ENST00000296026 SMCR8Q8TEV9 937 aaPredicted RBP24.07■■□□□ 1.44
CXCL3-201ENST00000296026 ZBTB7BO15156 539 aaPredicted RBP24.06■■□□□ 1.44
CXCL3-201ENST00000296026 BAG3O95817 575 aa24.06■■□□□ 1.44
CXCL3-201ENST00000296026 RLBP1P12271 317 aa24.06■■□□□ 1.44
CXCL3-201ENST00000296026 AATFQ9NY61 560 aaKnown RBP eCLIP24.06■■□□□ 1.44
CXCL3-201ENST00000296026 AGTPBP1Q9UPW5 1226 aa24.06■■□□□ 1.44
CXCL3-201ENST00000296026 CYP2E1P05181 493 aaPredicted RBP24.05■■□□□ 1.44
CXCL3-201ENST00000296026 CAP2P40123 477 aa24.05■■□□□ 1.44
CXCL3-201ENST00000296026 GABRQQ9UN88 632 aa24.05■■□□□ 1.44
CXCL3-201ENST00000296026 NOP58Q9Y2X3 529 aaKnown RBP24.05■■□□□ 1.44
CXCL3-201ENST00000296026 ATAD5Q96QE3 1844 aa24.05■■□□□ 1.44
CXCL3-201ENST00000296026 PLCG2P16885 1265 aa24.04■■□□□ 1.44
CXCL3-201ENST00000296026 SPP2Q13103 211 aa24.04■■□□□ 1.44
CXCL3-201ENST00000296026 RRP1BQ14684 758 aaKnown RBP24.04■■□□□ 1.44
CXCL3-201ENST00000296026 TREML2Q5T2D2 321 aa24.04■■□□□ 1.44
CXCL3-201ENST00000296026 ZNF512BQ96KM6 892 aaPredicted RBP24.04■■□□□ 1.44
CXCL3-201ENST00000296026 BIN2Q9UBW5 565 aaPredicted RBP24.04■■□□□ 1.44
CXCL3-201ENST00000296026 HERC5Q9UII4 1024 aaKnown RBP24.04■■□□□ 1.44
CXCL3-201ENST00000296026 ZAP70P43403 619 aa24.03■■□□□ 1.44
CXCL3-201ENST00000296026 PPP4CP60510 307 aa24.03■■□□□ 1.44
CXCL3-201ENST00000296026 ADGRA1Q86SQ6 560 aa24.03■■□□□ 1.44
CXCL3-201ENST00000296026 PROCA1Q8NCQ7 364 aaPredicted RBP24.03■■□□□ 1.44
CXCL3-201ENST00000296026 ZNF280CQ8ND82 737 aa24.03■■□□□ 1.44
CXCL3-201ENST00000296026 TBC1D2Q9BYX2 928 aa24.03■■□□□ 1.44
CXCL3-201ENST00000296026 DHX36Q9H2U1 1008 aaKnown RBP24.03■■□□□ 1.44
CXCL3-201ENST00000296026 PI4KBQ9UBF8 816 aa24.03■■□□□ 1.44
CXCL3-201ENST00000296026 DBNLQ9UJU6 430 aaKnown RBP24.03■■□□□ 1.44
CXCL3-201ENST00000296026 MKI67P46013 3256 aaKnown RBP24.03■■□□□ 1.44
CXCL3-201ENST00000296026 TGFBRAP1Q8WUH2 860 aa24.02■■□□□ 1.44
CXCL3-201ENST00000296026 SHISA4Q96DD7 197 aa24.02■■□□□ 1.44
CXCL3-201ENST00000296026 CCDC8Q9H0W5 538 aaPredicted RBP24.02■■□□□ 1.44
CXCL3-201ENST00000296026 TLR7Q9NYK1 1049 aaKnown RBP24.02■■□□□ 1.44
CXCL3-201ENST00000296026 PNMA3Q9UL41 463 aa24.02■■□□□ 1.44
CXCL3-201ENST00000296026 MYO5AQ9Y4I1 1855 aaKnown RBP24.02■■□□□ 1.44
CXCL3-201ENST00000296026 BRCA2P51587 3418 aa24.01■■□□□ 1.43
CXCL3-201ENST00000296026 SIPA1L1O43166 1804 aa24.01■■□□□ 1.43
CXCL3-201ENST00000296026 USP17L5A8MUK1 530 aa24.01■■□□□ 1.43
CXCL3-201ENST00000296026 TNPO2O14787 897 aaKnown RBP24.01■■□□□ 1.43
CXCL3-201ENST00000296026 CCL5P13501 91 aa24.01■■□□□ 1.43
CXCL3-201ENST00000296026 HMGCS2P54868 508 aa24.01■■□□□ 1.43
CXCL3-201ENST00000296026 UBXN2AP68543 259 aa24.01■■□□□ 1.43
CXCL3-201ENST00000296026 MAPKAPK5Q8IW41 473 aa24.01■■□□□ 1.43
CXCL3-201ENST00000296026 ANKRD13CQ8N6S4 541 aa24.01■■□□□ 1.43
CXCL3-201ENST00000296026 SLAIN1Q8ND83 568 aa24.01■■□□□ 1.43
CXCL3-201ENST00000296026 PIH1D3Q9NQM4 214 aaKnown RBP24.01■■□□□ 1.43
CXCL3-201ENST00000296026 LOC285556D6RIA3 1793 aa24.01■■□□□ 1.43
CXCL3-201ENST00000296026 FLT3LGP49771 235 aa24■■□□□ 1.43
CXCL3-201ENST00000296026 HABP4Q5JVS0 413 aaKnown RBP24■■□□□ 1.43
CXCL3-201ENST00000296026 NKX2-3Q8TAU0 364 aa24■■□□□ 1.43
CXCL3-201ENST00000296026 EAF2Q96CJ1 260 aaPredicted RBP24■■□□□ 1.43
CXCL3-201ENST00000296026 RNF208Q9H0X6 261 aa24■■□□□ 1.43
CXCL3-201ENST00000296026 PCDH10Q9P2E7 1040 aa24■■□□□ 1.43
CXCL3-201ENST00000296026 FLT1P17948 1338 aa24■■□□□ 1.43
CXCL3-201ENST00000296026 CDK5RAP2Q96SN8 1893 aa24■■□□□ 1.43
CXCL3-201ENST00000296026 ADCY3O60266 1144 aa23.99■■□□□ 1.43
CXCL3-201ENST00000296026 IGSF3O75054 1194 aa23.99■■□□□ 1.43
CXCL3-201ENST00000296026 GJB1P08034 283 aa23.99■■□□□ 1.43
CXCL3-201ENST00000296026 DIEXFQ68CQ4 756 aaKnown RBP23.99■■□□□ 1.43
CXCL3-201ENST00000296026 CEP85Q6P2H3 762 aa23.99■■□□□ 1.43
CXCL3-201ENST00000296026 AS3MTQ9HBK9 375 aa23.99■■□□□ 1.43
CXCL3-201ENST00000296026 FOCADQ5VW36 1801 aa23.98■■□□□ 1.43
CXCL3-201ENST00000296026 GJA8P48165 433 aa23.98■■□□□ 1.43
CXCL3-201ENST00000296026 PABPC4Q13310 644 aaKnown RBP eCLIP23.98■■□□□ 1.43
CXCL3-201ENST00000296026 FAM110CQ1W6H9 321 aa23.98■■□□□ 1.43
CXCL3-201ENST00000296026 FOXP4Q8IVH2 680 aaPredicted RBP23.98■■□□□ 1.43
CXCL3-201ENST00000296026 PALD1Q9ULE6 856 aa23.98■■□□□ 1.43
CXCL3-201ENST00000296026 ELNP15502 786 aa23.97■■□□□ 1.43
CXCL3-201ENST00000296026 CYP7A1P22680 504 aa23.97■■□□□ 1.43
CXCL3-201ENST00000296026 DYNLL1P63167 89 aaKnown RBP23.97■■□□□ 1.43
CXCL3-201ENST00000296026 SH3D19Q5HYK7 790 aa23.97■■□□□ 1.43
CXCL3-201ENST00000296026 CRACR2BQ8N4Y2 399 aaPredicted RBP23.97■■□□□ 1.43
CXCL3-201ENST00000296026 COA7Q96BR5 231 aa23.97■■□□□ 1.43
CXCL3-201ENST00000296026 TRIM34Q9BYJ4 488 aa23.97■■□□□ 1.43
CXCL3-201ENST00000296026 DNAJC18Q9H819 358 aa23.97■■□□□ 1.43
CXCL3-201ENST00000296026 ZBED9Q6R2W3 1325 aa23.96■■□□□ 1.43
CXCL3-201ENST00000296026 IDH1O75874 414 aaKnown RBP23.96■■□□□ 1.43
CXCL3-201ENST00000296026 ASNSP08243 561 aa23.96■■□□□ 1.43
CXCL3-201ENST00000296026 GCLCP48506 637 aaPredicted RBP23.96■■□□□ 1.43
CXCL3-201ENST00000296026 IRF5Q13568 498 aa23.96■■□□□ 1.43
CXCL3-201ENST00000296026 METTL16Q86W50 562 aaKnown RBP23.96■■□□□ 1.43
CXCL3-201ENST00000296026 PANK1Q8TE04 598 aa23.96■■□□□ 1.43
CXCL3-201ENST00000296026 PXYLP1Q8TE99 480 aa23.96■■□□□ 1.43
CXCL3-201ENST00000296026 WDR18Q9BV38 432 aa23.96■■□□□ 1.43
CXCL3-201ENST00000296026 UNC93B1Q9H1C4 597 aa23.96■■□□□ 1.43
CXCL3-201ENST00000296026 ASCC2Q9H1I8 757 aaPredicted RBP23.96■■□□□ 1.43
CXCL3-201ENST00000296026 EXOC6BQ9Y2D4 811 aa23.96■■□□□ 1.43
CXCL3-201ENST00000296026 JAG1P78504 1218 aa23.95■■□□□ 1.42
CXCL3-201ENST00000296026 MTMR2Q13614 643 aa23.95■■□□□ 1.42
CXCL3-201ENST00000296026 SAP30BPQ9UHR5 308 aaKnown RBP23.95■■□□□ 1.42
CXCL3-201ENST00000296026 NDUFB9Q9Y6M9 179 aa23.95■■□□□ 1.42
CXCL3-201ENST00000296026 INHAP05111 366 aa23.94■■□□□ 1.42
CXCL3-201ENST00000296026 MIGA1Q8NAN2 632 aa23.94■■□□□ 1.42
CXCL3-201ENST00000296026 U2AF1L4Q8WU68 220 aaKnown RBP23.94■■□□□ 1.42
CXCL3-201ENST00000296026 TAOK2Q9UL54 1235 aa23.94■■□□□ 1.42
CXCL3-201ENST00000296026 H0YGN5 161 aa23.93■■□□□ 1.42
CXCL3-201ENST00000296026 GDF11O95390 407 aa23.93■■□□□ 1.42
CXCL3-201ENST00000296026 HLA-DOAP06340 250 aa23.93■■□□□ 1.42
CXCL3-201ENST00000296026 BACE1P56817 501 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms