RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 PLIN2Q99541 437 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 DBNDD2Q9BQY9 259 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 PCCAP05165 728 aaPredicted RBP15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 ABCB5Q2M3G0 1257 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 PIK3AP1Q6ZUJ8 805 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 CDC37L1Q7L3B6 337 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 PPM1EQ8WY54 764 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 BCCIPQ9P287 314 aaKnown RBP eCLIP15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 PNMA3Q9UL41 463 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 TMOD1P28289 359 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 CHRNDQ07001 517 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 CEP135Q66GS9 1140 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 DEPTORQ8TB45 409 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 MASTLQ96GX5 879 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 CHD1O14646 1710 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 YWHAEP62258 255 aaKnown RBP15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 ICA1Q05084 483 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 JADE2Q9NQC1 790 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 CNPY2Q9Y2B0 182 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 KRT19P08727 400 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 TFAP4Q01664 338 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 CARD14Q9BXL6 1004 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 DNM3Q9UQ16 869 aa15.24■□□□□ 0.03
PDGFRB-201ENST00000261799 CLRN2A0PK11 232 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 KDRP35968 1356 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 POTEB2H3BUK9 544 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 PRDM1O75626 825 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 FMNL1O95466 1100 aaPredicted RBP15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 UQCRHP07919 91 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 IQCGQ9H095 443 aaKnown RBP15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 ANKARQ7Z5J8 1434 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 NEURL1BA8MQ27 555 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 HOXD10P28358 340 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 LIN9Q5TKA1 542 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 RIOK1Q9BRS2 568 aaKnown RBP15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 MED10Q9BTT4 135 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 SWAP70Q9UH65 585 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 UTP14CQ5TAP6 766 aaKnown RBP15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 TMX3Q96JJ7 454 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 ODF2LQ9ULJ1 636 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 INSRP06213 1382 aa15.23■□□□□ 0.03
PDGFRB-201ENST00000261799 PLCB3Q01970 1234 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 GABPAQ06546 454 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 CNNM4Q6P4Q7 775 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 HAUS7Q99871 368 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 SPON1Q9HCB6 807 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 PPARAQ07869 468 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 CCDC125Q86Z20 511 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 FAM169AQ9Y6X4 670 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 FAM135BQ49AJ0 1406 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 STK10O94804 968 aaKnown RBP15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 ZAP70P43403 619 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 ADPGKQ9BRR6 497 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 DCTPP1Q9H773 170 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 ARHGEF5Q12774 1597 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 SEMA3EO15041 775 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 TXKP42681 527 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 CFAP58Q5T655 872 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 MAEAQ7L5Y9 396 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 G2E3Q7L622 706 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 NRBP2Q9NSY0 501 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 V9GY48 417 aaPredicted RBP15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 VWA3AA6NCI4 1184 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 SPECC1Q5M775 1068 aa15.22■□□□□ 0.03
PDGFRB-201ENST00000261799 PARD3Q8TEW0 1356 aa15.21■□□□□ 0.03
PDGFRB-201ENST00000261799 SH3BP5O60239 455 aa15.21■□□□□ 0.03
PDGFRB-201ENST00000261799 GYG1P46976 350 aa15.21■□□□□ 0.03
PDGFRB-201ENST00000261799 MKRN3Q13064 507 aaKnown RBP15.21■□□□□ 0.03
PDGFRB-201ENST00000261799 CALCRLQ16602 461 aa15.21■□□□□ 0.03
PDGFRB-201ENST00000261799 ZCCHC11Q5TAX3 1644 aaKnown RBP15.21■□□□□ 0.03
PDGFRB-201ENST00000261799 GAS7O60861 476 aa15.21■□□□□ 0.03
PDGFRB-201ENST00000261799 ANO3Q9BYT9 981 aa15.21■□□□□ 0.03
PDGFRB-201ENST00000261799 ATP8A2Q9NTI2 1148 aa15.21■□□□□ 0.03
PDGFRB-201ENST00000261799 CCPG1Q9ULG6 757 aa15.21■□□□□ 0.03
PDGFRB-201ENST00000261799 URI1O94763 535 aaPredicted RBP15.21■□□□□ 0.03
PDGFRB-201ENST00000261799 DBNDD1Q9H9R9 158 aa15.21■□□□□ 0.03
PDGFRB-201ENST00000261799 TXNDC16Q9P2K2 825 aa15.21■□□□□ 0.03
PDGFRB-201ENST00000261799 ARAP3Q8WWN8 1544 aa15.21■□□□□ 0.02
PDGFRB-201ENST00000261799 CKAP4Q07065 602 aaKnown RBP15.21■□□□□ 0.02
PDGFRB-201ENST00000261799 RNF181Q9P0P0 153 aa15.21■□□□□ 0.02
PDGFRB-201ENST00000261799 ADD3Q9UEY8 706 aaKnown RBP15.21■□□□□ 0.02
PDGFRB-201ENST00000261799 AGTPBP1Q9UPW5 1226 aa15.21■□□□□ 0.02
PDGFRB-201ENST00000261799 GRIN3BO60391 1043 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 ATP2A2P16615 1042 aaKnown RBP15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 SLC27A3Q5K4L6 730 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 MYCT1Q8N699 235 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 CCDC155Q8N6L0 562 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 GABPB2Q8TAK5 448 aaPredicted RBP15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 CSRNP1Q96S65 589 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 TMX1Q9H3N1 280 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 UBASH3AP57075 661 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 RAPGEF1Q13905 1077 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 CCDC129Q6ZRS4 1044 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 TTLL7Q6ZT98 887 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 ATP10DQ9P241 1426 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 KRT9P35527 623 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 KLHDC4Q8TBB5 520 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 GTF3C6Q969F1 213 aa15.2■□□□□ 0.02
PDGFRB-201ENST00000261799 AOX1Q06278 1338 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms