RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 ADALQ6DHV7 355 aa15.21■□□□□ 0.03
THSD1-201ENST00000258613 ENAHQ8N8S7 591 aaPredicted RBP15.21■□□□□ 0.03
THSD1-201ENST00000258613 TRIM5Q9C035 493 aa15.21■□□□□ 0.03
THSD1-201ENST00000258613 AXDND1Q5T1B0 1012 aaPredicted RBP15.21■□□□□ 0.03
THSD1-201ENST00000258613 KCNF1Q9H3M0 494 aa15.21■□□□□ 0.03
THSD1-201ENST00000258613 CNNM2Q9H8M5 875 aa15.21■□□□□ 0.03
THSD1-201ENST00000258613 ERICH2A1L162 156 aa15.21■□□□□ 0.02
THSD1-201ENST00000258613 TRIM37O94972 964 aa15.21■□□□□ 0.02
THSD1-201ENST00000258613 PLEKHA8P1O95397 391 aa15.21■□□□□ 0.02
THSD1-201ENST00000258613 USP17L8P0C7I0 530 aa15.21■□□□□ 0.02
THSD1-201ENST00000258613 VEGFAP15692 232 aaPredicted RBP15.21■□□□□ 0.02
THSD1-201ENST00000258613 FANCBQ8NB91 859 aa15.21■□□□□ 0.02
THSD1-201ENST00000258613 PTGS1P23219 599 aa15.2■□□□□ 0.02
THSD1-201ENST00000258613 LRMPQ12912 555 aa15.2■□□□□ 0.02
THSD1-201ENST00000258613 NOM1Q5C9Z4 860 aaKnown RBP15.2■□□□□ 0.02
THSD1-201ENST00000258613 CPLX2Q6PUV4 134 aaKnown RBP15.2■□□□□ 0.02
THSD1-201ENST00000258613 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.2■□□□□ 0.02
THSD1-201ENST00000258613 POLR3EQ9NVU0 708 aa15.2■□□□□ 0.02
THSD1-201ENST00000258613 DRC7Q8IY82 874 aa15.2■□□□□ 0.02
THSD1-201ENST00000258613 CNBD1Q8NA66 436 aa15.2■□□□□ 0.02
THSD1-201ENST00000258613 DYNLL2Q96FJ2 89 aa15.2■□□□□ 0.02
THSD1-201ENST00000258613 PYCARDQ9ULZ3 195 aa15.2■□□□□ 0.02
THSD1-201ENST00000258613 A0A1B0GUL6 1792 aa15.2■□□□□ 0.02
THSD1-201ENST00000258613 PFKFB1P16118 471 aa15.19■□□□□ 0.02
THSD1-201ENST00000258613 OLFM4Q6UX06 510 aa15.19■□□□□ 0.02
THSD1-201ENST00000258613 NBPF11Q86T75 865 aa15.19■□□□□ 0.02
THSD1-201ENST00000258613 DCP1AQ9NPI6 582 aaPredicted RBP15.19■□□□□ 0.02
THSD1-201ENST00000258613 VPS54Q9P1Q0 977 aa15.19■□□□□ 0.02
THSD1-201ENST00000258613 TNRC6CQ9HCJ0 1690 aaKnown RBP15.19■□□□□ 0.02
THSD1-201ENST00000258613 ECM29Q5VYK3 1845 aa15.19■□□□□ 0.02
THSD1-201ENST00000258613 CDKL5O76039 1030 aa15.19■□□□□ 0.02
THSD1-201ENST00000258613 ZNF202O95125 648 aa15.19■□□□□ 0.02
THSD1-201ENST00000258613 SART3Q15020 963 aaKnown RBP15.19■□□□□ 0.02
THSD1-201ENST00000258613 SEC23AQ15436 765 aa15.19■□□□□ 0.02
THSD1-201ENST00000258613 DPCR1Q3MIW9 517 aa15.19■□□□□ 0.02
THSD1-201ENST00000258613 PRR5LQ6MZQ0 368 aa15.19■□□□□ 0.02
THSD1-201ENST00000258613 BRAPQ7Z569 592 aa15.19■□□□□ 0.02
THSD1-201ENST00000258613 DIS3L2Q8IYB7 885 aaKnown RBP15.19■□□□□ 0.02
THSD1-201ENST00000258613 ZNF500O60304 480 aaPredicted RBP15.18■□□□□ 0.02
THSD1-201ENST00000258613 FMNL1O95466 1100 aaPredicted RBP15.18■□□□□ 0.02
THSD1-201ENST00000258613 TOB1P50616 345 aaPredicted RBP15.18■□□□□ 0.02
THSD1-201ENST00000258613 TRIM29Q14134 588 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 ARID5BQ14865 1188 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 IQCB1Q15051 598 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 SHC4Q6S5L8 630 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 CRACR2BQ8N4Y2 399 aaPredicted RBP15.18■□□□□ 0.02
THSD1-201ENST00000258613 ESR2Q92731 530 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 ADAMTS3O15072 1205 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 IFNAR1P17181 557 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 EARS2Q5JPH6 523 aaKnown RBP15.18■□□□□ 0.02
THSD1-201ENST00000258613 ZSCAN10Q96SZ4 725 aaPredicted RBP15.18■□□□□ 0.02
THSD1-201ENST00000258613 V9GY48 417 aaPredicted RBP15.18■□□□□ 0.02
THSD1-201ENST00000258613 FOXN1O15353 648 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 OFD1O75665 1012 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 SLC39A14Q15043 492 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 PTPAQ15257 358 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 CCDC186Q7Z3E2 898 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 SLC44A5Q8NCS7 719 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 MAP3K14Q99558 947 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 MCM9Q9NXL9 1143 aa15.18■□□□□ 0.02
THSD1-201ENST00000258613 DZIP1Q86YF9 867 aaKnown RBP15.17■□□□□ 0.02
THSD1-201ENST00000258613 AOPEPQ8N6M6 819 aa15.17■□□□□ 0.02
THSD1-201ENST00000258613 KCNG4Q8TDN1 519 aa15.17■□□□□ 0.02
THSD1-201ENST00000258613 WNT7AO00755 349 aa15.17■□□□□ 0.02
THSD1-201ENST00000258613 IFIT1BQ5T764 474 aaKnown RBP15.17■□□□□ 0.02
THSD1-201ENST00000258613 RASGRP2Q7LDG7 609 aa15.17■□□□□ 0.02
THSD1-201ENST00000258613 RNF41Q9H4P4 317 aaPredicted RBP15.17■□□□□ 0.02
THSD1-201ENST00000258613 QTRT2Q9H974 415 aaKnown RBP15.17■□□□□ 0.02
THSD1-201ENST00000258613 SAP30BPQ9UHR5 308 aaKnown RBP15.17■□□□□ 0.02
THSD1-201ENST00000258613 PCDHB6Q9Y5E3 794 aa15.17■□□□□ 0.02
THSD1-201ENST00000258613 SCN7AQ01118 1682 aa15.17■□□□□ 0.02
THSD1-201ENST00000258613 YEATS4O95619 227 aa15.16■□□□□ 0.02
THSD1-201ENST00000258613 GPSM2P81274 684 aa15.16■□□□□ 0.02
THSD1-201ENST00000258613 PTPN21Q16825 1174 aa15.16■□□□□ 0.02
THSD1-201ENST00000258613 SH3RF3Q8TEJ3 882 aaPredicted RBP15.16■□□□□ 0.02
THSD1-201ENST00000258613 CABP5Q9NP86 173 aa15.16■□□□□ 0.02
THSD1-201ENST00000258613 GYS1P13807 737 aa15.16■□□□□ 0.02
THSD1-201ENST00000258613 CCDC144BQ3MJ40 725 aa15.16■□□□□ 0.02
THSD1-201ENST00000258613 ATL3Q6DD88 541 aa15.16■□□□□ 0.02
THSD1-201ENST00000258613 USP49Q70CQ1 688 aa15.16■□□□□ 0.02
THSD1-201ENST00000258613 DHX40Q8IX18 779 aaKnown RBP15.16■□□□□ 0.02
THSD1-201ENST00000258613 BBXQ8WY36 941 aaPredicted RBP15.16■□□□□ 0.02
THSD1-201ENST00000258613 ANKRD2Q9GZV1 360 aa15.16■□□□□ 0.02
THSD1-201ENST00000258613 TAF1LQ8IZX4 1826 aa15.16■□□□□ 0.02
THSD1-201ENST00000258613 U2AF2P26368 475 aaKnown RBP eCLIP15.15■□□□□ 0.02
THSD1-201ENST00000258613 ZNF75DP51815 510 aa15.15■□□□□ 0.02
THSD1-201ENST00000258613 PNOCQ13519 176 aa15.15■□□□□ 0.02
THSD1-201ENST00000258613 TRIM22Q8IYM9 498 aa15.15■□□□□ 0.02
THSD1-201ENST00000258613 PDILTQ8N807 584 aa15.15■□□□□ 0.02
THSD1-201ENST00000258613 MMP1P03956 469 aa15.15■□□□□ 0.02
THSD1-201ENST00000258613 KIAA2012Q0VF49 1180 aa15.15■□□□□ 0.02
THSD1-201ENST00000258613 STX1AQ16623 288 aa15.15■□□□□ 0.02
THSD1-201ENST00000258613 DNTTIP2Q5QJE6 756 aaKnown RBP15.15■□□□□ 0.02
THSD1-201ENST00000258613 NOSTRINQ8IVI9 506 aa15.15■□□□□ 0.02
THSD1-201ENST00000258613 TDRD7Q8NHU6 1098 aaKnown RBP15.15■□□□□ 0.02
THSD1-201ENST00000258613 MYH6P13533 1939 aa15.15■□□□□ 0.02
THSD1-201ENST00000258613 BECN2A8MW95 431 aa15.15■□□□□ 0.02
THSD1-201ENST00000258613 SERPINB2P05120 415 aa15.15■□□□□ 0.02
THSD1-201ENST00000258613 GRAPQ13588 217 aa15.15■□□□□ 0.02
THSD1-201ENST00000258613 GRAPLQ8TC17 118 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms