RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 SLC51AQ86UW1 340 aa21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 ZNF384Q8TF68 577 aa21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 ANKRD2Q9GZV1 360 aa21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 RGPD3A6NKT7 1758 aaPredicted RBP21.7■■□□□ 1.06
PDLIM4-201ENST00000253754 RGPD4Q7Z3J3 1758 aa21.7■■□□□ 1.06
PDLIM4-201ENST00000253754 MAGEB6P1A0A0J9YX57 407 aa21.7■■□□□ 1.06
PDLIM4-201ENST00000253754 CTAGE5O15320 804 aa21.7■■□□□ 1.06
PDLIM4-201ENST00000253754 CMTR1Q8N1G2 835 aaKnown RBP21.7■■□□□ 1.06
PDLIM4-201ENST00000253754 GNL3LQ9NVN8 582 aaKnown RBP21.7■■□□□ 1.06
PDLIM4-201ENST00000253754 A0A1W2PQ27 194 aa21.69■■□□□ 1.06
PDLIM4-201ENST00000253754 A0A1W2PQ64 194 aa21.69■■□□□ 1.06
PDLIM4-201ENST00000253754 A0A1W2PQD8 194 aa21.69■■□□□ 1.06
PDLIM4-201ENST00000253754 MARCKSP29966 332 aaPredicted RBP21.69■■□□□ 1.06
PDLIM4-201ENST00000253754 GUCY1A2P33402 732 aa21.69■■□□□ 1.06
PDLIM4-201ENST00000253754 CAVIN4Q5BKX8 364 aa21.69■■□□□ 1.06
PDLIM4-201ENST00000253754 CYP2D7A0A087X1C5 515 aa21.69■■□□□ 1.06
PDLIM4-201ENST00000253754 STX1AQ16623 288 aa21.69■■□□□ 1.06
PDLIM4-201ENST00000253754 ILDR2Q71H61 639 aa21.69■■□□□ 1.06
PDLIM4-201ENST00000253754 CCDC82Q8N4S0 544 aa21.69■■□□□ 1.06
PDLIM4-201ENST00000253754 RIOK1Q9BRS2 568 aaKnown RBP21.69■■□□□ 1.06
PDLIM4-201ENST00000253754 WDHD1O75717 1129 aaPredicted RBP21.68■■□□□ 1.06
PDLIM4-201ENST00000253754 MMP10P09238 476 aa21.68■■□□□ 1.06
PDLIM4-201ENST00000253754 IQCB1Q15051 598 aa21.68■■□□□ 1.06
PDLIM4-201ENST00000253754 PIBF1Q8WXW3 757 aa21.68■■□□□ 1.06
PDLIM4-201ENST00000253754 TRIM5Q9C035 493 aa21.68■■□□□ 1.06
PDLIM4-201ENST00000253754 ANKIB1Q9P2G1 1089 aa21.68■■□□□ 1.06
PDLIM4-201ENST00000253754 MROH7-TTC4A0A0A0MT08 1334 aa21.68■■□□□ 1.06
PDLIM4-201ENST00000253754 CHD4Q14839 1912 aa21.68■■□□□ 1.06
PDLIM4-201ENST00000253754 GNL2Q13823 731 aaKnown RBP21.68■■□□□ 1.06
PDLIM4-201ENST00000253754 WTAPQ15007 396 aa21.68■■□□□ 1.06
PDLIM4-201ENST00000253754 AXDND1Q5T1B0 1012 aaPredicted RBP21.68■■□□□ 1.06
PDLIM4-201ENST00000253754 ECM29Q5VYK3 1845 aa21.68■■□□□ 1.06
PDLIM4-201ENST00000253754 ZNF75DP51815 510 aa21.67■■□□□ 1.06
PDLIM4-201ENST00000253754 SLC15A2Q16348 729 aa21.67■■□□□ 1.06
PDLIM4-201ENST00000253754 RBM17Q96I25 401 aaKnown RBP21.67■■□□□ 1.06
PDLIM4-201ENST00000253754 SDF4Q9BRK5 362 aa21.67■■□□□ 1.06
PDLIM4-201ENST00000253754 PYCARDQ9ULZ3 195 aa21.67■■□□□ 1.06
PDLIM4-201ENST00000253754 PTGS1P23219 599 aa21.67■■□□□ 1.06
PDLIM4-201ENST00000253754 SSRP1Q08945 709 aaKnown RBP21.67■■□□□ 1.06
PDLIM4-201ENST00000253754 PLA2G4DQ86XP0 818 aa21.67■■□□□ 1.06
PDLIM4-201ENST00000253754 NRBP1Q9UHY1 535 aa21.67■■□□□ 1.06
PDLIM4-201ENST00000253754 FMNL1O95466 1100 aaPredicted RBP21.66■■□□□ 1.06
PDLIM4-201ENST00000253754 EVX2Q03828 476 aa21.66■■□□□ 1.06
PDLIM4-201ENST00000253754 NOLC1Q14978 699 aaKnown RBP eCLIP21.66■■□□□ 1.06
PDLIM4-201ENST00000253754 RTN1Q16799 776 aa21.66■■□□□ 1.06
PDLIM4-201ENST00000253754 NUP133Q8WUM0 1156 aa21.66■■□□□ 1.06
PDLIM4-201ENST00000253754 JAG2Q9Y219 1238 aa21.66■■□□□ 1.06
PDLIM4-201ENST00000253754 PARP3Q9Y6F1 533 aa21.66■■□□□ 1.06
PDLIM4-201ENST00000253754 CACNA1SQ13698 1873 aa21.65■■□□□ 1.06
PDLIM4-201ENST00000253754 TRIM29Q14134 588 aa21.65■■□□□ 1.06
PDLIM4-201ENST00000253754 SART3Q15020 963 aaKnown RBP21.65■■□□□ 1.06
PDLIM4-201ENST00000253754 SLC39A14Q15043 492 aa21.65■■□□□ 1.06
PDLIM4-201ENST00000253754 UPF1Q92900 1129 aaKnown RBP eCLIP21.65■■□□□ 1.06
PDLIM4-201ENST00000253754 PRDM1O75626 825 aa21.64■■□□□ 1.06
PDLIM4-201ENST00000253754 PFKFB1P16118 471 aa21.64■■□□□ 1.06
PDLIM4-201ENST00000253754 IFNAR1P17181 557 aa21.64■■□□□ 1.06
PDLIM4-201ENST00000253754 DHX40Q8IX18 779 aaKnown RBP21.64■■□□□ 1.06
PDLIM4-201ENST00000253754 DRC7Q8IY82 874 aa21.64■■□□□ 1.06
PDLIM4-201ENST00000253754 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.64■■□□□ 1.06
PDLIM4-201ENST00000253754 RNF41Q9H4P4 317 aaPredicted RBP21.64■■□□□ 1.06
PDLIM4-201ENST00000253754 STK32BQ9NY57 414 aa21.64■■□□□ 1.06
PDLIM4-201ENST00000253754 KCNJ14Q9UNX9 436 aa21.64■■□□□ 1.06
PDLIM4-201ENST00000253754 ERICH2A1L162 156 aa21.64■■□□□ 1.05
PDLIM4-201ENST00000253754 U2AF2P26368 475 aaKnown RBP eCLIP21.64■■□□□ 1.05
PDLIM4-201ENST00000253754 FBXO33Q7Z6M2 555 aa21.64■■□□□ 1.05
PDLIM4-201ENST00000253754 TXNRD3Q86VQ6 643 aa21.64■■□□□ 1.05
PDLIM4-201ENST00000253754 MAP3K14Q99558 947 aa21.64■■□□□ 1.05
PDLIM4-201ENST00000253754 UBAC1Q9BSL1 405 aa21.64■■□□□ 1.05
PDLIM4-201ENST00000253754 BRIP1Q9BX63 1249 aa21.64■■□□□ 1.05
PDLIM4-201ENST00000253754 STK36Q9NRP7 1315 aa21.64■■□□□ 1.05
PDLIM4-201ENST00000253754 KLRG2A4D1S0 409 aaPredicted RBP21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 GOLGA6L19H0YKK7 550 aa21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 CAVIN2O95810 425 aa21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 PTPAQ15257 358 aa21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 CCDC186Q7Z3E2 898 aa21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 ZNF654Q8IZM8 581 aa21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 TNKSO95271 1327 aa21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 NID2Q14112 1375 aa21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 GOLGA6L6A8MZA4 724 aa21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 ZNF202O95125 648 aa21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 HOXA10P31260 410 aaPredicted RBP21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 HIBADHP31937 336 aaKnown RBP21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 CHAF1AQ13111 956 aaPredicted RBP21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 NBPF11Q86T75 865 aa21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 ANO10Q9NW15 660 aa21.63■■□□□ 1.05
PDLIM4-201ENST00000253754 ANKRD31Q8N7Z5 1873 aa21.62■■□□□ 1.05
PDLIM4-201ENST00000253754 BTBD18B2RXH4 712 aa21.62■■□□□ 1.05
PDLIM4-201ENST00000253754 CLIC6Q96NY7 704 aa21.62■■□□□ 1.05
PDLIM4-201ENST00000253754 BBOX1O75936 387 aa21.62■■□□□ 1.05
PDLIM4-201ENST00000253754 CMA1P23946 247 aa21.62■■□□□ 1.05
PDLIM4-201ENST00000253754 MECOMQ03112 1051 aa21.62■■□□□ 1.05
PDLIM4-201ENST00000253754 RGS22Q8NE09 1264 aa21.62■■□□□ 1.05
PDLIM4-201ENST00000253754 NSUN4Q96CB9 384 aaKnown RBP21.62■■□□□ 1.05
PDLIM4-201ENST00000253754 ANAPC4Q9UJX5 808 aa21.62■■□□□ 1.05
PDLIM4-201ENST00000253754 XDHP47989 1333 aa21.61■■□□□ 1.05
PDLIM4-201ENST00000253754 BIN1O00499 593 aa21.61■■□□□ 1.05
PDLIM4-201ENST00000253754 TPM2P07951 284 aa21.61■■□□□ 1.05
PDLIM4-201ENST00000253754 PRDX5P30044 214 aa21.61■■□□□ 1.05
PDLIM4-201ENST00000253754 LRMPQ12912 555 aa21.61■■□□□ 1.05
PDLIM4-201ENST00000253754 SEC23AQ15436 765 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms