RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 MCCP23508 829 aa11.07□□□□□ -0.64
TGFB3-201ENST00000238682 ZNF157P51786 506 aaPredicted RBP11.07□□□□□ -0.64
TGFB3-201ENST00000238682 LBX1P52954 281 aa11.07□□□□□ -0.64
TGFB3-201ENST00000238682 ANAPC15P60006 121 aa11.07□□□□□ -0.64
TGFB3-201ENST00000238682 ZMYM1Q5SVZ6 1142 aa11.07□□□□□ -0.64
TGFB3-201ENST00000238682 L1TD1Q5T7N2 865 aaKnown RBP11.07□□□□□ -0.64
TGFB3-201ENST00000238682 ANKRD13AQ8IZ07 590 aa11.07□□□□□ -0.64
TGFB3-201ENST00000238682 HELBQ8NG08 1087 aaPredicted RBP11.07□□□□□ -0.64
TGFB3-201ENST00000238682 APPBP2Q92624 585 aa11.07□□□□□ -0.64
TGFB3-201ENST00000238682 ZCCHC17Q9NP64 241 aaKnown RBP11.07□□□□□ -0.64
TGFB3-201ENST00000238682 MANSC4A6NHS7 340 aaPredicted RBP11.07□□□□□ -0.64
TGFB3-201ENST00000238682 ADM5C9JUS6 153 aa11.07□□□□□ -0.64
TGFB3-201ENST00000238682 KIF20AO95235 890 aa11.07□□□□□ -0.64
TGFB3-201ENST00000238682 TERF1P54274 439 aa11.07□□□□□ -0.64
TGFB3-201ENST00000238682 RASGRF1Q13972 1273 aa11.07□□□□□ -0.64
TGFB3-201ENST00000238682 PARP9Q8IXQ6 854 aa11.07□□□□□ -0.64
TGFB3-201ENST00000238682 WNT10BO00744 389 aa11.06□□□□□ -0.64
TGFB3-201ENST00000238682 TM4SF4P48230 202 aa11.06□□□□□ -0.64
TGFB3-201ENST00000238682 MCMDC2Q4G0Z9 681 aa11.06□□□□□ -0.64
TGFB3-201ENST00000238682 LDLRAD1Q5T700 205 aa11.06□□□□□ -0.64
TGFB3-201ENST00000238682 SLC51AQ86UW1 340 aa11.06□□□□□ -0.64
TGFB3-201ENST00000238682 FAM163AQ96GL9 167 aaPredicted RBP11.06□□□□□ -0.64
TGFB3-201ENST00000238682 ADD2P35612 726 aa11.06□□□□□ -0.64
TGFB3-201ENST00000238682 ZAP70P43403 619 aa11.06□□□□□ -0.64
TGFB3-201ENST00000238682 BCAMP50895 628 aa11.06□□□□□ -0.64
TGFB3-201ENST00000238682 KIAA1211Q6ZU35 1233 aa11.06□□□□□ -0.64
TGFB3-201ENST00000238682 SND1Q7KZF4 910 aaKnown RBP eCLIP11.06□□□□□ -0.64
TGFB3-201ENST00000238682 PPME1Q9Y570 386 aa11.06□□□□□ -0.64
TGFB3-201ENST00000238682 SPDYE2BA6NHP3 402 aa11.05□□□□□ -0.64
TGFB3-201ENST00000238682 GOLIM4O00461 696 aa11.05□□□□□ -0.64
TGFB3-201ENST00000238682 PPP1R12BO60237 982 aaPredicted RBP11.05□□□□□ -0.64
TGFB3-201ENST00000238682 CYP2E1P05181 493 aaPredicted RBP11.05□□□□□ -0.64
TGFB3-201ENST00000238682 SPDYE6P0CI01 402 aa11.05□□□□□ -0.64
TGFB3-201ENST00000238682 CAPN2P17655 700 aa11.05□□□□□ -0.64
TGFB3-201ENST00000238682 IREB2P48200 963 aaKnown RBP11.05□□□□□ -0.64
TGFB3-201ENST00000238682 RGS19P49795 217 aa11.05□□□□□ -0.64
TGFB3-201ENST00000238682 GTF2IP78347 998 aa11.05□□□□□ -0.64
TGFB3-201ENST00000238682 SGSM3Q96HU1 749 aa11.05□□□□□ -0.64
TGFB3-201ENST00000238682 DNAJC2Q99543 621 aaKnown RBP11.05□□□□□ -0.64
TGFB3-201ENST00000238682 DSCC1Q9BVC3 393 aa11.05□□□□□ -0.64
TGFB3-201ENST00000238682 ZNF408Q9H9D4 720 aa11.05□□□□□ -0.64
TGFB3-201ENST00000238682 KIF23Q02241 960 aaPredicted RBP11.05□□□□□ -0.64
TGFB3-201ENST00000238682 SPDYE2Q495Y8 402 aa11.05□□□□□ -0.64
TGFB3-201ENST00000238682 OTUD7BQ6GQQ9 843 aa11.05□□□□□ -0.64
TGFB3-201ENST00000238682 PLCG2P16885 1265 aa11.04□□□□□ -0.64
TGFB3-201ENST00000238682 GYG1P46976 350 aa11.04□□□□□ -0.64
TGFB3-201ENST00000238682 ARHGEF6Q15052 776 aa11.04□□□□□ -0.64
TGFB3-201ENST00000238682 FOXD4L6Q3SYB3 417 aaPredicted RBP11.04□□□□□ -0.64
TGFB3-201ENST00000238682 FOXD4L3Q6VB84 417 aaPredicted RBP11.04□□□□□ -0.64
TGFB3-201ENST00000238682 MICAL1Q8TDZ2 1067 aa11.04□□□□□ -0.64
TGFB3-201ENST00000238682 KCNB2Q92953 911 aa11.04□□□□□ -0.64
TGFB3-201ENST00000238682 TBC1D32Q96NH3 1257 aa11.04□□□□□ -0.64
TGFB3-201ENST00000238682 KCNQ5Q9NR82 932 aa11.04□□□□□ -0.64
TGFB3-201ENST00000238682 CTNNA3Q9UI47 895 aa11.04□□□□□ -0.64
TGFB3-201ENST00000238682 SHTN1A0MZ66 631 aa11.04□□□□□ -0.64
TGFB3-201ENST00000238682 ALX1Q15699 326 aa11.04□□□□□ -0.64
TGFB3-201ENST00000238682 FAM83AQ86UY5 434 aa11.04□□□□□ -0.64
TGFB3-201ENST00000238682 ABHD8Q96I13 439 aa11.04□□□□□ -0.64
TGFB3-201ENST00000238682 TMOD2Q9NZR1 351 aa11.04□□□□□ -0.64
TGFB3-201ENST00000238682 CCDC171Q6TFL3 1326 aa11.03□□□□□ -0.64
TGFB3-201ENST00000238682 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.03□□□□□ -0.64
TGFB3-201ENST00000238682 GOLGA6L3A6NEY3 463 aa11.03□□□□□ -0.64
TGFB3-201ENST00000238682 AOC2O75106 756 aa11.03□□□□□ -0.64
TGFB3-201ENST00000238682 FRAT2O75474 233 aaPredicted RBP11.03□□□□□ -0.64
TGFB3-201ENST00000238682 SLC20A2Q08357 652 aa11.03□□□□□ -0.64
TGFB3-201ENST00000238682 CFAP100Q494V2 611 aa11.03□□□□□ -0.64
TGFB3-201ENST00000238682 HHIPL2Q6UWX4 724 aa11.03□□□□□ -0.64
TGFB3-201ENST00000238682 TCRBV5S4A2TA0A5A2 114 aa11.03□□□□□ -0.64
TGFB3-201ENST00000238682 TSGA10IPQ3SY00 556 aa11.03□□□□□ -0.64
TGFB3-201ENST00000238682 RNF20Q5VTR2 975 aa11.03□□□□□ -0.64
TGFB3-201ENST00000238682 CTU1Q7Z7A3 348 aaKnown RBP11.03□□□□□ -0.64
TGFB3-201ENST00000238682 TRIM44Q96DX7 344 aaPredicted RBP11.03□□□□□ -0.64
TGFB3-201ENST00000238682 RNF186Q9NXI6 227 aa11.03□□□□□ -0.64
TGFB3-201ENST00000238682 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
TGFB3-201ENST00000238682 EGFRP00533 1210 aa11.02□□□□□ -0.64
TGFB3-201ENST00000238682 PDE6AP16499 860 aa11.02□□□□□ -0.64
TGFB3-201ENST00000238682 PPP4CP60510 307 aa11.02□□□□□ -0.64
TGFB3-201ENST00000238682 IRX3P78415 501 aaPredicted RBP11.02□□□□□ -0.64
TGFB3-201ENST00000238682 TSHZ3Q63HK5 1081 aa11.02□□□□□ -0.64
TGFB3-201ENST00000238682 USP26Q9BXU7 913 aa11.02□□□□□ -0.64
TGFB3-201ENST00000238682 PIH1D3Q9NQM4 214 aaKnown RBP11.02□□□□□ -0.64
TGFB3-201ENST00000238682 LRP2BPQ9P2M1 347 aa11.02□□□□□ -0.64
TGFB3-201ENST00000238682 LAMA4Q16363 1823 aa11.02□□□□□ -0.65
TGFB3-201ENST00000238682 WDHD1O75717 1129 aaPredicted RBP11.02□□□□□ -0.65
TGFB3-201ENST00000238682 LDHBP07195 334 aaKnown RBP11.02□□□□□ -0.65
TGFB3-201ENST00000238682 PCP11498 1178 aaKnown RBP11.02□□□□□ -0.65
TGFB3-201ENST00000238682 NMIQ13287 307 aaPredicted RBP11.02□□□□□ -0.65
TGFB3-201ENST00000238682 KRT32Q14532 448 aa11.02□□□□□ -0.65
TGFB3-201ENST00000238682 ZDHHC15Q96MV8 337 aa11.02□□□□□ -0.65
TGFB3-201ENST00000238682 NOL10Q9BSC4 688 aaKnown RBP11.02□□□□□ -0.65
TGFB3-201ENST00000238682 C22orf23Q9BZE7 217 aa11.02□□□□□ -0.65
TGFB3-201ENST00000238682 TMEM51Q9NW97 253 aa11.02□□□□□ -0.65
TGFB3-201ENST00000238682 COL2A1P02458 1487 aaPredicted RBP11.02□□□□□ -0.65
TGFB3-201ENST00000238682 BAG3O95817 575 aa11.01□□□□□ -0.65
TGFB3-201ENST00000238682 DCAF15Q66K64 600 aa11.01□□□□□ -0.65
TGFB3-201ENST00000238682 MAP4K1Q92918 833 aa11.01□□□□□ -0.65
TGFB3-201ENST00000238682 TEKT1Q969V4 418 aa11.01□□□□□ -0.65
TGFB3-201ENST00000238682 GAKO14976 1311 aa11.01□□□□□ -0.65
TGFB3-201ENST00000238682 NBPF9Q3BBW0 867 aa11.01□□□□□ -0.65
TGFB3-201ENST00000238682 MFSD14BQ5SR56 506 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms