RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 GOLGA8AA7E2F4 631 aa11.43□□□□□ -0.58
MDH1-201ENST00000233114 SMTNL1A8MU46 457 aa11.43□□□□□ -0.58
MDH1-201ENST00000233114 CAMTA2O94983 1202 aa11.43□□□□□ -0.58
MDH1-201ENST00000233114 SLC3A2P08195 630 aaKnown RBP11.43□□□□□ -0.58
MDH1-201ENST00000233114 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
MDH1-201ENST00000233114 PPP2R5BQ15173 497 aa11.43□□□□□ -0.58
MDH1-201ENST00000233114 TMEM67Q5HYA8 995 aa11.43□□□□□ -0.58
MDH1-201ENST00000233114 AKNAD1Q5T1N1 836 aa11.43□□□□□ -0.58
MDH1-201ENST00000233114 SUSD4Q5VX71 490 aa11.43□□□□□ -0.58
MDH1-201ENST00000233114 KRT40Q6A162 431 aa11.43□□□□□ -0.58
MDH1-201ENST00000233114 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.43□□□□□ -0.58
MDH1-201ENST00000233114 MORC2Q9Y6X9 1032 aaPredicted RBP11.43□□□□□ -0.58
MDH1-201ENST00000233114 BCL9LQ86UU0 1499 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 NEDD4P46934 1319 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 CCDC196A0A1B0GTZ2 297 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 B4E1Z4 1266 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 KIF28PB7ZC32 967 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 CUTAO60888 179 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 ZNF202O95125 648 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 MBD4O95243 580 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 FMNL1O95466 1100 aaPredicted RBP11.42□□□□□ -0.58
MDH1-201ENST00000233114 POLR3DP05423 398 aaPredicted RBP11.42□□□□□ -0.58
MDH1-201ENST00000233114 IFNAR1P17181 557 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 CRKLP46109 303 aaKnown RBP11.42□□□□□ -0.58
MDH1-201ENST00000233114 NLRP12P59046 1061 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 SSRP1Q08945 709 aaKnown RBP11.42□□□□□ -0.58
MDH1-201ENST00000233114 NTRK3Q16288 839 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 OTUD7BQ6GQQ9 843 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 TMED8Q6PL24 325 aaPredicted RBP11.42□□□□□ -0.58
MDH1-201ENST00000233114 NFXL1Q6ZNB6 911 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 VPS37DQ86XT2 251 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 SMARCC1Q92922 1105 aaPredicted RBP11.42□□□□□ -0.58
MDH1-201ENST00000233114 EPB41L4AQ9HCS5 686 aaPredicted RBP11.42□□□□□ -0.58
MDH1-201ENST00000233114 HPSEQ9Y251 543 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 ZNF652Q9Y2D9 606 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 SLC12A7Q9Y666 1083 aa11.42□□□□□ -0.58
MDH1-201ENST00000233114 COL5A3P25940 1745 aaPredicted RBP11.42□□□□□ -0.58
MDH1-201ENST00000233114 SPATA31A1Q5TZJ5 1347 aa11.41□□□□□ -0.58
MDH1-201ENST00000233114 A0A1B0GVL5 298 aa11.41□□□□□ -0.58
MDH1-201ENST00000233114 CCDC69A6NI79 296 aa11.41□□□□□ -0.58
MDH1-201ENST00000233114 IKBKBO14920 756 aa11.41□□□□□ -0.58
MDH1-201ENST00000233114 NTSR2O95665 410 aa11.41□□□□□ -0.58
MDH1-201ENST00000233114 PFKFB1P16118 471 aa11.41□□□□□ -0.58
MDH1-201ENST00000233114 PTGER2P43116 358 aa11.41□□□□□ -0.58
MDH1-201ENST00000233114 SYCP1Q15431 976 aa11.41□□□□□ -0.58
MDH1-201ENST00000233114 CLEC4GQ6UXB4 293 aa11.41□□□□□ -0.58
MDH1-201ENST00000233114 C17orf53Q8N3J3 647 aaPredicted RBP11.41□□□□□ -0.58
MDH1-201ENST00000233114 AOPEPQ8N6M6 819 aa11.41□□□□□ -0.58
MDH1-201ENST00000233114 MAGEB6Q8N7X4 407 aa11.41□□□□□ -0.58
MDH1-201ENST00000233114 SYTL4Q96C24 671 aaPredicted RBP11.41□□□□□ -0.58
MDH1-201ENST00000233114 OSBPL5Q9H0X9 879 aaPredicted RBP11.41□□□□□ -0.58
MDH1-201ENST00000233114 PAXBP1Q9Y5B6 917 aa11.41□□□□□ -0.58
MDH1-201ENST00000233114 A0A1B0GUL6 1792 aa11.41□□□□□ -0.58
MDH1-201ENST00000233114 ZNF804BA4D1E1 1349 aa11.4□□□□□ -0.58
MDH1-201ENST00000233114 LOC102724428A0A0B4J2F2 783 aa11.4□□□□□ -0.58
MDH1-201ENST00000233114 GSG1L2A8MUP6 293 aa11.4□□□□□ -0.58
MDH1-201ENST00000233114 IFIT3O14879 490 aaKnown RBP11.4□□□□□ -0.58
MDH1-201ENST00000233114 PCP11498 1178 aaKnown RBP11.4□□□□□ -0.58
MDH1-201ENST00000233114 CDC27P30260 824 aa11.4□□□□□ -0.58
MDH1-201ENST00000233114 KCNJ6P48051 423 aa11.4□□□□□ -0.58
MDH1-201ENST00000233114 SIK1P57059 783 aa11.4□□□□□ -0.58
MDH1-201ENST00000233114 GNL2Q13823 731 aaKnown RBP11.4□□□□□ -0.58
MDH1-201ENST00000233114 PTPAQ15257 358 aa11.4□□□□□ -0.58
MDH1-201ENST00000233114 MFSD6Q6ZSS7 791 aa11.4□□□□□ -0.58
MDH1-201ENST00000233114 LRRC8AQ8IWT6 810 aa11.4□□□□□ -0.58
MDH1-201ENST00000233114 TRIM22Q8IYM9 498 aa11.4□□□□□ -0.58
MDH1-201ENST00000233114 CACTINQ8WUQ7 758 aaKnown RBP11.4□□□□□ -0.58
MDH1-201ENST00000233114 FAM217BQ9NTX9 383 aaPredicted RBP11.4□□□□□ -0.58
MDH1-201ENST00000233114 GNL3LQ9NVN8 582 aaKnown RBP11.4□□□□□ -0.58
MDH1-201ENST00000233114 FAM13BQ9NYF5 915 aa11.4□□□□□ -0.58
MDH1-201ENST00000233114 TUBE1Q9UJT0 475 aa11.4□□□□□ -0.58
MDH1-201ENST00000233114 ANAPC4Q9UJX5 808 aa11.4□□□□□ -0.58
MDH1-201ENST00000233114 KDM4FA0A1W2PPD8 638 aa11.4□□□□□ -0.59
MDH1-201ENST00000233114 ERICH2A1L162 156 aa11.4□□□□□ -0.59
MDH1-201ENST00000233114 KIF2AO00139 706 aaPredicted RBP11.4□□□□□ -0.59
MDH1-201ENST00000233114 SYKP43405 635 aa11.4□□□□□ -0.59
MDH1-201ENST00000233114 SAFBQ15424 915 aaKnown RBP eCLIP11.4□□□□□ -0.59
MDH1-201ENST00000233114 DDB1Q16531 1140 aa11.4□□□□□ -0.59
MDH1-201ENST00000233114 RESP18Q5W5W9 173 aa11.4□□□□□ -0.59
MDH1-201ENST00000233114 MICU3Q86XE3 530 aa11.4□□□□□ -0.59
MDH1-201ENST00000233114 CCDC150Q8NCX0 1101 aa11.4□□□□□ -0.59
MDH1-201ENST00000233114 MAP3K14Q99558 947 aa11.4□□□□□ -0.59
MDH1-201ENST00000233114 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.4□□□□□ -0.59
MDH1-201ENST00000233114 NRBP1Q9UHY1 535 aa11.4□□□□□ -0.59
MDH1-201ENST00000233114 PDS5AQ29RF7 1337 aaKnown RBP11.39□□□□□ -0.59
MDH1-201ENST00000233114 CTIFO43310 598 aaKnown RBP11.39□□□□□ -0.59
MDH1-201ENST00000233114 NRDCO43847 1150 aa11.39□□□□□ -0.59
MDH1-201ENST00000233114 ATP6V1AP38606 617 aa11.39□□□□□ -0.59
MDH1-201ENST00000233114 TDO2P48775 406 aa11.39□□□□□ -0.59
MDH1-201ENST00000233114 UBE4AQ14139 1066 aa11.39□□□□□ -0.59
MDH1-201ENST00000233114 RTN1Q16799 776 aa11.39□□□□□ -0.59
MDH1-201ENST00000233114 CCDC144BQ3MJ40 725 aa11.39□□□□□ -0.59
MDH1-201ENST00000233114 BARGINQ6ZT62 677 aa11.39□□□□□ -0.59
MDH1-201ENST00000233114 CCDC144CPQ8IYA2 1237 aa11.39□□□□□ -0.59
MDH1-201ENST00000233114 KHSRPQ92945 711 aaKnown RBP eCLIP11.39□□□□□ -0.592e-8■■□□□ 14.2
MDH1-201ENST00000233114 FOXP1Q9H334 677 aaPredicted RBP11.39□□□□□ -0.59
MDH1-201ENST00000233114 ARMT1Q9H993 441 aa11.39□□□□□ -0.59
MDH1-201ENST00000233114 ZSWIM5Q9P217 1185 aa11.39□□□□□ -0.59
MDH1-201ENST00000233114 HOOK1Q9UJC3 728 aaKnown RBP11.39□□□□□ -0.59
MDH1-201ENST00000233114 MROH7-TTC4A0A0A0MT08 1334 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms