RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 WDR66Q8TBY9 1149 aa16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 POLR3EQ9NVU0 708 aa16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 STK36Q9NRP7 1315 aa16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 CCDC88AQ3V6T2 1871 aa16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 STK38Q15208 465 aa16.75■□□□□ 0.27
PRKAB1-201ENST00000229328 C15orf52Q6ZUT6 534 aaKnown RBP16.75■□□□□ 0.27
PRKAB1-201ENST00000229328 ENGASEQ8NFI3 743 aa16.75■□□□□ 0.27
PRKAB1-201ENST00000229328 ATP8A2Q9NTI2 1148 aa16.75■□□□□ 0.27
PRKAB1-201ENST00000229328 FSIP1Q8NA03 581 aa16.75■□□□□ 0.27
PRKAB1-201ENST00000229328 RGS22Q8NE09 1264 aa16.75■□□□□ 0.27
PRKAB1-201ENST00000229328 CRACR2BQ8N4Y2 399 aaPredicted RBP16.74■□□□□ 0.27
PRKAB1-201ENST00000229328 USP17L8P0C7I0 530 aa16.74■□□□□ 0.27
PRKAB1-201ENST00000229328 HOXA10P31260 410 aaPredicted RBP16.74■□□□□ 0.27
PRKAB1-201ENST00000229328 FAM47AQ5JRC9 791 aa16.74■□□□□ 0.27
PRKAB1-201ENST00000229328 ANO1Q5XXA6 986 aa16.74■□□□□ 0.27
PRKAB1-201ENST00000229328 SH3RF3Q8TEJ3 882 aaPredicted RBP16.74■□□□□ 0.27
PRKAB1-201ENST00000229328 CD209Q9NNX6 404 aa16.74■□□□□ 0.27
PRKAB1-201ENST00000229328 POLLQ9UGP5 575 aa16.74■□□□□ 0.27
PRKAB1-201ENST00000229328 GGA1Q9UJY5 639 aa16.74■□□□□ 0.27
PRKAB1-201ENST00000229328 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 SPTLC2O15270 562 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 AP5Z1O43299 807 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 NMT2O60551 498 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 YEATS4O95619 227 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 CCDC73Q6ZRK6 1079 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 KCNJ14Q9UNX9 436 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 A0A1B0GVL5 298 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 KLRG2A4D1S0 409 aaPredicted RBP16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 BBOX1O75936 387 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 ATP2B4P23634 1241 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 U2AF2P26368 475 aaKnown RBP eCLIP16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 FAM160A1Q05DH4 1040 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 TRIM29Q14134 588 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 SF3A1Q15459 793 aaKnown RBP16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 ANO6Q4KMQ2 910 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 IFIT1BQ5T764 474 aaKnown RBP16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 ADALQ6DHV7 355 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 KCNG4Q8TDN1 519 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 MCM9Q9NXL9 1143 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 KIAA1551Q9HCM1 1747 aa16.73■□□□□ 0.27
PRKAB1-201ENST00000229328 RCAN1P53805 252 aa16.72■□□□□ 0.27
PRKAB1-201ENST00000229328 SBK1Q52WX2 424 aa16.72■□□□□ 0.27
PRKAB1-201ENST00000229328 COL23A1Q86Y22 540 aaPredicted RBP16.72■□□□□ 0.27
PRKAB1-201ENST00000229328 TBC1D16Q8TBP0 767 aa16.72■□□□□ 0.27
PRKAB1-201ENST00000229328 ARPP21Q9UBL0 812 aaPredicted RBP16.72■□□□□ 0.27
PRKAB1-201ENST00000229328 MKRN1Q9UHC7 482 aaKnown RBP16.72■□□□□ 0.27
PRKAB1-201ENST00000229328 ORC4O43929 436 aa16.72■□□□□ 0.27
PRKAB1-201ENST00000229328 PCP11498 1178 aaKnown RBP16.72■□□□□ 0.27
PRKAB1-201ENST00000229328 GNL2Q13823 731 aaKnown RBP16.72■□□□□ 0.27
PRKAB1-201ENST00000229328 IQCA1Q86XH1 822 aa16.72■□□□□ 0.27
PRKAB1-201ENST00000229328 MRPS27Q92552 414 aaKnown RBP16.72■□□□□ 0.27
PRKAB1-201ENST00000229328 LAMB1P07942 1786 aa16.72■□□□□ 0.27
PRKAB1-201ENST00000229328 CCDC196A0A1B0GTZ2 297 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 ADCY5O95622 1261 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 CLCN1P35523 988 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 NDUFA8P51970 172 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 RBM6P78332 1123 aaKnown RBP16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 TMED8Q6PL24 325 aaPredicted RBP16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 TRIM22Q8IYM9 498 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 FMR1NBQ8N0W7 255 aaPredicted RBP16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 FAM200AQ8TCP9 573 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 CRAMP1Q96RY5 1269 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 A0A1W2PQ27 194 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 A0A1W2PQ64 194 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 A0A1W2PQD8 194 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 APBA3O96018 575 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 IL1R1P14778 569 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 MARCKSP29966 332 aaPredicted RBP16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 HS1BP3Q53T59 392 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 ZSCAN30Q86W11 494 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 PODXL2Q9NZ53 605 aa16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.71■□□□□ 0.27
PRKAB1-201ENST00000229328 BTBD18B2RXH4 712 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 WDHD1O75717 1129 aaPredicted RBP16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 PLEKHA8P1O95397 391 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 DEXIO95424 95 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 MMP1P03956 469 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 USP5P45974 858 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 TROAPQ12815 778 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 SLC39A14Q15043 492 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 AXDND1Q5T1B0 1012 aaPredicted RBP16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 SASS6Q6UVJ0 657 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 LUZP1Q86V48 1076 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 WASF1Q92558 559 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 SHISA4Q96DD7 197 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 hCG_1642624A0A1W2PR95 340 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 KINO60870 393 aaKnown RBP16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 PLCB2Q00722 1185 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 FUT2Q10981 343 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 CATIPQ7Z7H3 387 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 MPNDQ8N594 471 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 ERCC4Q92889 916 aaPredicted RBP16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 DYNLL2Q96FJ2 89 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 MAP3K14Q99558 947 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 CBX8Q9HC52 389 aa16.7■□□□□ 0.26
PRKAB1-201ENST00000229328 A0A087WWV3 80 aa16.69■□□□□ 0.26
PRKAB1-201ENST00000229328 C6orf229H3BNL8 230 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms