RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 MYRIPQ8NFW9 859 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 SMARCC2Q8TAQ2 1214 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 WDR66Q8TBY9 1149 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 NSUN4Q96CB9 384 aaKnown RBP10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 SLC26A6Q9BXS9 759 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 MCM9Q9NXL9 1143 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 C4BP0C0L5 1744 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 SLC3A2P08195 630 aaKnown RBP10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 CAMK4Q16566 473 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 CCDC183Q5T5S1 534 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 APOA5Q6Q788 366 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 AMOTL1Q8IY63 956 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 ZNF396Q96N95 335 aaPredicted RBP10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 RREB1Q92766 1687 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 MMP10P09238 476 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 ATP2B4P23634 1241 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 AKAP17AQ02040 695 aaKnown RBP10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 IQCA1Q86XH1 822 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 COL23A1Q86Y22 540 aaPredicted RBP10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 ALG1Q9BT22 464 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 GJB4Q9NTQ9 266 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 F8W031 263 aaPredicted RBP10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 BBOX1O75936 387 aa10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 ME1P48163 572 aa10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 DIXDC1Q155Q3 683 aa10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 ZNF827Q17R98 1081 aa10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 NKX2-3Q8TAU0 364 aa10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.3□□□□□ -0.762e-6■■■■□ 20.5
MTHFD1-201ENST00000216605 COL4A1P02462 1669 aa10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 BCORQ6W2J9 1755 aa10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 MYH7P12883 1935 aa10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 SMIM22K7EJ46 135 aa10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 POLRMTO00411 1230 aaKnown RBP10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 BAG3O95817 575 aa10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 GIMAP6Q6P9H5 292 aa10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 TRIM22Q8IYM9 498 aa10.3□□□□□ -0.76
MTHFD1-201ENST00000216605 SSRP1Q08945 709 aaKnown RBP10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 RESTQ13127 1097 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 RTN1Q16799 776 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 CMTR1Q8N1G2 835 aaKnown RBP10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 LEO1Q8WVC0 666 aaPredicted RBP10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 STAG1Q8WVM7 1258 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 AIFM3Q96NN9 605 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 RIOK1Q9BRS2 568 aaKnown RBP10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 FTOQ9C0B1 505 aaKnown RBP eCLIP10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 ZC3H12CQ9C0D7 883 aaKnown RBP10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 LY9Q9HBG7 655 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 HPS5Q9UPZ3 1129 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 LRP5O75197 1615 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 ZMYM6O95789 1325 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 TSPY2A6NKD2 308 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 PPEF1O14829 653 aaPredicted RBP10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 LDHCP07864 332 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 GSTO1P78417 241 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 TMEM87AQ8NBN3 555 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 IGDCC4Q8TDY8 1250 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 TSPYL1Q9H0U9 437 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 WDR19Q8NEZ3 1342 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 FDPSP14324 419 aaKnown RBP10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 STK38Q15208 465 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 FAM47AQ5JRC9 791 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 MFSD14BQ5SR56 506 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 IFIT1BQ5T764 474 aaKnown RBP10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 TMTC2Q8N394 836 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 BANK1Q8NDB2 785 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 PIBF1Q8WXW3 757 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 MKNK2Q9HBH9 465 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 CD209Q9NNX6 404 aa10.29□□□□□ -0.76
MTHFD1-201ENST00000216605 SCN7AQ01118 1682 aa10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 TNKSO95271 1327 aa10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 CDC27P30260 824 aa10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 GTF2IP78347 998 aa10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 PDE4BQ07343 736 aa10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 NOLC1Q14978 699 aaKnown RBP eCLIP10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 TGFBRAP1Q8WUH2 860 aa10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 SAP30BPQ9UHR5 308 aaKnown RBP10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 COL1A1P02452 1464 aaPredicted RBP10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 CYP2D6P10635 497 aa10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 CTR9Q6PD62 1173 aa10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 CATIPQ7Z7H3 387 aa10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 NUP62CLQ9H1M0 184 aa10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 DACT1Q9NYF0 836 aa10.28□□□□□ -0.76
MTHFD1-201ENST00000216605 CCDC196A0A1B0GTZ2 297 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 PLSCR1O15162 318 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 USP17L8P0C7I0 530 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 LIG1P18858 919 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 ATP2B1P20020 1258 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 LIFRP42702 1097 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 SAFBQ15424 915 aaKnown RBP eCLIP10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 OLFM4Q6UX06 510 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 DPP8Q6V1X1 898 aaPredicted RBP10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 CCDC73Q6ZRK6 1079 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 MAPKAPK5Q8IW41 473 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 CKAP2LQ8IYA6 745 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 MPNDQ8N594 471 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 FLAD1Q8NFF5 587 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 ZNF384Q8TF68 577 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 USP28Q96RU2 1077 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 BRIP1Q9BX63 1249 aa10.27□□□□□ -0.76
MTHFD1-201ENST00000216605 TNMDQ9H2S6 317 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms